EMLSAT00000012334, EMLSAT00000012334-708181 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012334
Unique NameEMLSAT00000012334-708181
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s8supercontigLSalAtl2s8:1773328..1774127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012334 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012334EMLSAG00000012334-695100Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055353EMLSAE00000055353-764281Lepeophtheirus salmonisexon
EMLSAE00000055354EMLSAE00000055354-764282Lepeophtheirus salmonisexon
EMLSAE00000055355EMLSAE00000055355-764283Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780876auto780876Lepeophtheirus salmonispolypeptide
EMLSAP00000012334EMLSAP00000012334Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012334

>EMLSAP00000012334 ID=EMLSAP00000012334|Name=EMLSAP00000012334|organism=Lepeophtheirus salmonis|type=polypeptide|length=168bp
MYYSTTQSLHYTSLAKKKTNLKEKTNPKKKRFFFHILMINIIYLLLLVAP
QHPFALSSFTKLPPNLKNKKNTLHILPKPPKREEDSSKIFFKALITFTIP
IRAIIINLIIHSYQFYFASLKKKKNQLEAFLPSYIFLSMNIHLQLHTTYI
TYLYICETSFSYLLQLYI
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mRNA from alignment at LSalAtl2s8:1773328..1774127-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012334-708181 ID=EMLSAT00000012334-708181|Name=EMLSAT00000012334|organism=Lepeophtheirus salmonis|type=mRNA|length=800bp|location=Sequence derived from alignment at LSalAtl2s8:1773328..1774127- (Lepeophtheirus salmonis)
ATGTATTATTCAACAACACAAAGCCTTCACTACACATCACTTGGTAAATT
GGGGCCGCTGCTGTTGCTTACATCATGTTACCACACTGTTACCACACACT
ATCTACATAGGGCGGCTCATTTTTCGGGAGTGGTTGTTCCTTTTTTCTAC
GTGGTTGCACGTAGAGTTAGAAGGGATATTCCAAAATTTTGAAGATGTGG
ATCATAAATGATAATTATTTTAATATACATTTAAAAGAGCAAAAAAAAAA
ACAAATTTGAAAGAAAAAACAAACCCCAAAAAAAAAAGATTTTTTTTCCA
TATTCTTATGATCAACATAATATATTTATTATTACTTGTCGCCCCTCAAC
ACCCATTTGCCCTTTCTTCGTTTACGTTTAACCCCCAGCCCCAATAATAA
TACACTTTATAACAATAAGAAAACCACTCCTTCCATCAAAAATGCATTTG
AACAAATTAATTAATTAATAAGCAAATTACCCCCAAACTTAAAAAACAAA
AAAAACACACTTCACATCCTTCCCAAGCCTCCAAAGAGGGAAGAAGACTC
ATCCAAAATATTTTTTAAAGCCTTAATAACATTTACTATTCCAATTAGAG
CAATAATTATTAATTTAATAATTCATTCTTATCAGTTTTATTTTGCTTCT
TTAAAAAAAAAAAAAAACCAATTGGAGGCTTTTCTGCCCAGTTACATATT
TCTAAGCATGAATATTCATTTACAATTGCATACTACTTATATAACTTACC
TATATATCTGTGAGACAAGTTTTTCATATTTATTACAATTATACATATAA
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