EMLSAT00000012361, EMLSAT00000012361-708208 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012361
Unique NameEMLSAT00000012361-708208
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s903supercontigLSalAtl2s903:216203..218634 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012361 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012361EMLSAG00000012361-695127Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055464EMLSAE00000055464-764392Lepeophtheirus salmonisexon
EMLSAE00000055465EMLSAE00000055465-764393Lepeophtheirus salmonisexon
EMLSAE00000055466EMLSAE00000055466-764394Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774704auto774704Lepeophtheirus salmonispolypeptide
EMLSAP00000012361EMLSAP00000012361Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012361

>EMLSAP00000012361 ID=EMLSAP00000012361|Name=EMLSAP00000012361|organism=Lepeophtheirus salmonis|type=polypeptide|length=347bp
MSQRLPPLPTLKDILRIYGIRAQKKLSQNFILDPKTLSRLSKVTGSLYNK
TVVEVGPGPGGITXAILEQGAQKVFVIEKDSRFLPSLDLLREASGNRLSI
KIGDCLHFNTQKLLNSDLKSNWPDQVPNIRLIGNLPFNVATPYVVKLFEC
MSDRSNIFSFGRVPSILTFQHEVAYRLIAPPGDKHRCRLSVMAQNYAKID
YKYTLPGAAFVPTPEVNVGVAVLIPLSVPYIDVPFKFLERVVTTIMMHKQ
KSVFRTSLRLFPSEVRGKMAMQLLDVSGVSKDKRPLDLTMDDFARITYTY
QDMIQKYENVKEYINRDVKIILNAAHNCDSNEIDLIESCKPKYHFVI
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mRNA from alignment at LSalAtl2s903:216203..218634+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012361-708208 ID=EMLSAT00000012361-708208|Name=EMLSAT00000012361|organism=Lepeophtheirus salmonis|type=mRNA|length=2432bp|location=Sequence derived from alignment at LSalAtl2s903:216203..218634+ (Lepeophtheirus salmonis)
TAGTACGTTAGATTCCATTCTAGAACTTCTTACGAGTCACTTTATTAGGA
CTCCTACCAGTATTTTAAAATATATAACATACTAGATATGTAGATAATTA
ATAAGAAAAGTTATTTTGAAATTAACAAAAGGTTGCGTGTTTTTTTATAT
AACAGTCCATACAAGATCCAAGGTCTTAAAAACTGCAGCAGCTTGCCTTT
AAGCTAGATGAGCATATTCCTCTGGACATCCATGTGATTACTGGTAATAA
ATATTCTAACTCAGAAGTTATTTTGCATGACGGATGAATAGATTTTTTGA
GAATCGTCACGTGAAATACGGTCTTCCTTTTCTCATACTCGTAGTTGGTT
CACCCTTTGTTTTAAAGAATTTTGGACAAATTCGTTACGACTATAGAGCG
ACTCAGCCCATAGCGGCATCGGATAAAGGTAATACTAGAAATTACATAAT
CCTTCAACTGAGTTACTTATATAACTTTAAACTTATTATTGATCATTCTC
TCCTTTGGCAGCCAAATACGGGTTAGATAAAATTAAAGACGTTCGCCCAG
AAGACTTTTACGAAAAGGAAGTGCTGGAATCTGGAAGTTCTACCGATTAT
CAAATGGTAAGAGGTCCTCGTGAATACGAACCTGAAACATTGGACACATT
TAAAAAGTTTAGAACCGATCACTTAAAGGGACAAAAGAGCATTTCAATCC
GCAAAAACACTTCAGAAGAATGAGCAGCATGCAAAGGATTCTCCGCCTGA
GGGCAGCTCCTTTAAGGATATTAAAACGGAGCAAGAGCATGAAGCAAGTA
AATGTTGATGACTTAGAAACGAGGGCAAAGTTAGGTAAGGTTGCGGAGTA
GAAGGATTTTCATTGCATACATAATTTGGTCTTCTTTCTAGGTTCCATCC
AAATGGATTTTATTCAAAAAGCAGAGAAAATGAATTCTAGAAGAGCTTCT
CAGTTTTCTAAATATCGTCGACAGGATTTGATCGTGGGTGGTGTTTGCTT
TACTATGGCTATTTCTATTTATTTATATACCATTTTTGCGATAAAACAAG
AACAATTCTTAGATGACTTTGAAATGCCAGATCCTATGTTGCCTGTTCAA
AAATCCTCCAAGGAATAATAGTACAGAATGAGTCAAAGATTACCTCCTTT
ACCTACTCTTAAAGACATTTTACGTATTTATGGCATTCGTGCTCAGAAAA
AACTATCTCAGAATTTTATACTTGATCCAAAGACATTATCACGACTATCT
AAAGTAACAGGATCCCTATATAATAAAACGGTTGTAGAAGTAGGCCCTGG
ACCTGGTGGAATTACASGAGCCATTTTAGAGCAAGGGGCCCAAAAAGTGT
TTGTGATTGAAAAGGATTCCAGATTTTTACCCTCTTTAGATCTTCTAAGA
GAGGCATCGGGGAATCGATTATCAATTAAAATTGGTGACTGTCTCCATTT
CAATACTCAGAAGTTGTTAAATTCTGATTTGAAATCAAATTGGCCAGATC
AAGTACCAAATATTAGATTAATTGGAAACCTTCCTTTTAATGTTGCAACC
CCGTATGTCGTTAAATTGTTTGAGTGTATGAGTGATAGGAGTAATATTTT
CTCTTTTGGAAGGGTTCCTTCTATCCTTACATTTCAGCACGAAGTTGCCT
ATCGTCTCATTGCTCCTCCTGGCGACAAACATCGTTGCCGTCTCTCAGTT
ATGGCTCAGAATTATGCTAAAATTGATTACAAATATACATTACCTGGGGC
AGCCTTTGTCCCTACTCCAGAAGTTAATGTTGGTGTAGCAGTACTCATTC
CTCTCTCTGTACCCTATATTGACGTACCATTTAAGTTTCTTGAAAGAGTT
GTAACTACAATCATGATGCATAAGCAAAAGTCGGTTTTTCGCACTTCTTT
AAGACTCTTTCCATCTGAAGTTAGAGGTAAAATGGCAATGCAATTATTGG
ATGTCTCTGGTGTCAGCAAAGACAAACGCCCTCTGGACTTAACAATGGAT
GACTTTGCTCGAATTACATATACTTATCAAGATATGATACAAAAATACGA
AAATGTAAAGGAATATATTAATCGAGATGTTAAAATCATTCTTAATGCCG
CACATAACTGTGATTCTAATGAGATTGATTTAATAGAATCATGTAAACCT
AAATACCATTTTGTAATATGAATATTTTTATTTAGTCAAATTCCCTTGTA
GTTATTGAAGTAATAAATTATTAAAAAAGAAAGAAAAAGTATTTCAATGT
AGTATTTTTAAAGTAGATCCAGCCCAACAACTGAAAGAAGTATCCTATGG
ATTCCAAATCTAGGTTAAACAAGATAACACTTTTTTACCATAATTATTGA
GATGTTATTTTTTTATTTCAAAACCATTAATGGATAAATACTATTTGAAT
GGAAATAAATAATCTTATGCAGACATAACCCA
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