EMLSAT00000012399, EMLSAT00000012399-708246 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012399
Unique NameEMLSAT00000012399-708246
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s908supercontigLSalAtl2s908:138075..138772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012399 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012399EMLSAG00000012399-695165Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055611EMLSAE00000055611-764539Lepeophtheirus salmonisexon
EMLSAE00000055612EMLSAE00000055612-764540Lepeophtheirus salmonisexon
EMLSAE00000055613EMLSAE00000055613-764541Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773061auto773061Lepeophtheirus salmonispolypeptide
EMLSAP00000012399EMLSAP00000012399Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012399

>EMLSAP00000012399 ID=EMLSAP00000012399|Name=EMLSAP00000012399|organism=Lepeophtheirus salmonis|type=polypeptide|length=180bp
MFQHSYVKTHEKSNKEDYPDHEAQTPLSLDIFIQEAPEIEALTYVLCSNR
INLVVANKSLSAKIQHLQAKLAREKASIMLSKKNRKKISKKVAQFCRKTY
IEGFLNKDQLRCLSKKGKNSRINWSSPTVKKAIKLRFACGSSGXESLLDP
GFPLPSLRTLXRKTEGISFESGILNDVFDV
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mRNA from alignment at LSalAtl2s908:138075..138772-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012399-708246 ID=EMLSAT00000012399-708246|Name=EMLSAT00000012399|organism=Lepeophtheirus salmonis|type=mRNA|length=698bp|location=Sequence derived from alignment at LSalAtl2s908:138075..138772- (Lepeophtheirus salmonis)
ATGTTTCAACATTCGTATGTTAAAACACACGAGAAATCAAATAAGGAAGA
TTATCCTGATCACGAAGCTCAAACCCCCTTATCATTAGACATTTTTATAC
AAGAAGCCCCTGAGATTGAAGCTCTAACATACGTACTATGCTCTAATCGT
ATTAATTTAGTAGTGGCAAATAAATCTTTATCTGCAAAAATACAGCATCT
TCAAGCGAAACTTGCCAGGGAAAAGGCTTCAATAATGTTAAGTAAAAAAA
ACCGTAAAAAGATATCAAAAAAGGTGGTATCTGTAAATCCTACAGTAGTA
TATTACTTTTATCATATATATTCTTTTAGGCTCAGTTTTGTCGCAAAACC
TATATTGAAGGGTTCTTGAATAAGGATCAATTAAGATGTTTGTCCAAGAA
AGGAAAGAACTCTAGAATCAATTGGTCAAGTCCAACAGTTAAAAAAGCAA
TAAAATTAAGGTAAAAAAATAAATAGAATGAATGAATTTAAGATTATTTT
ATGCCTTATTTTGAAGCTATGTCCTTTCTTATGAATTTGTAATGGTTTAT
TACACTTTTCAGATTTGCTTGTGGTTCGTCAGGGKATGAATCTCTTCTTG
ATCCAGGATTTCCTTTACCCTCGCTGAGGACACTGCRCAGGAAAACTGAA
GGCATTTCATTTGAAAGCGGTATTTTGAATGATGTTTTTGACGTTTAA
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