EMLSAT00000012414, EMLSAT00000012414-708261 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012414
Unique NameEMLSAT00000012414-708261
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s909supercontigLSalAtl2s909:45130..47670 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012414 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012414EMLSAG00000012414-695180Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055698EMLSAE00000055698-764626Lepeophtheirus salmonisexon
EMLSAE00000055699EMLSAE00000055699-764627Lepeophtheirus salmonisexon
EMLSAE00000055700EMLSAE00000055700-764628Lepeophtheirus salmonisexon
EMLSAE00000055701EMLSAE00000055701-764629Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770479auto770479Lepeophtheirus salmonispolypeptide
EMLSAP00000012414EMLSAP00000012414Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012414

>EMLSAP00000012414 ID=EMLSAP00000012414|Name=EMLSAP00000012414|organism=Lepeophtheirus salmonis|type=polypeptide|length=777bp
MIFRSLSVSSLGCLFLLSILLFGCTSVQAEEREDEIPTARVDADLGASRE
GSRTDTETLEREEEAMKLDGLSVKEMRELRGKAEKRVFQAEVNRMMKLII
NSLYRNKEIFLRELISNASDALDKIRLLSLTDKSVLSSNEELSIKIKADK
DNHVLTITDTGIGMTKADLINNLGTIAKSGTADFLSKLQDASSSQEMSDL
IGQFGVGFYSTFLVADKVIVTTKHNDDKQYIWESDSESYSIVEDPRGDSL
KRGTQISLLMKEEARDYLEQDTVDNLIKKYSQFINFNIYLWSSKTETVEE
PLDEDEEVAAKEEKKEEEVTEKNTEDEDAAVEEEKDEDKPKTKKVEKTTW
DWVLVNXSKPIWTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
DEIEDSEYDEFYKSITKDSNGPLAHTHFVAEGEVTFKSLLFVPVSQASES
FNKYGSIHENIKLYVRRVFITDDFKDMMPNYLSFVKGVVDSDDLPLNVSR
ETLQQHKLLKVIKKKLVRKTLDMIKKIDDEKYTSFWNEYSTNIKLGVIED
TANRTRLSKLLRFVSSIGKLVSLSDYVERMKDKQEHIFYMAGGSKDEVKN
SPFVERLLKKGYEVLYLTEAVDEYAISALPEFEGKKFQNVAKEGFNIDGE
TDAVKERRKGLKDKFEPLTKWLQEESLKDHILRAEVSERLEKSPCALITS
RFGWTANMQRIVQSQTHSKSQDMQKDYYLSQKKALEINPRHPLIKELLRR
IEDNPQDPVAQEMALMMLNTATLRSGI
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mRNA from alignment at LSalAtl2s909:45130..47670-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012414-708261 ID=EMLSAT00000012414-708261|Name=EMLSAT00000012414|organism=Lepeophtheirus salmonis|type=mRNA|length=2541bp|location=Sequence derived from alignment at LSalAtl2s909:45130..47670- (Lepeophtheirus salmonis)
ATGATCTTTCGGAGTTTAAGTGTGTCCAGTCTGGGCTGTCTATTCCTTTT
AAGTATTTTATTGTTTGGCTGCACAAGTGTTCAAGCTGAAGAGAGGGAGG
ATGAGATTCCTACAGCAAGGGTGGATGCGGATCTGGGTGCTTCTCGTGAA
GGTGAGTTGCTTTGAGATAGTGTGTGTTAACGGAAAGAACAATGGACTAT
TTGTGCAGGGTCCAGAACAGATACCGAGACGTTGGAGCGAGAGGAAGAAG
CCATGAAGTTGGACGGATTGTCCGTGAAGGAAATGCGAGAGCTTCGTGGT
AAGGCTGAGAAGAGGGTGTTCCAGGCGGAAGTGAACCGCATGATGAAGCT
CATTATCAACTCTCTCTACCGAAACAAGGAGATCTTCTTGAGAGAACTCA
TTTCCAATGCATCGGATGCTCTGGATAAGATCCGTCTCCTTTCTCTTACG
GACAAGTCTGTTCTCTCATCCAATGAAGAACTGTCCATCAAAATAAAGGC
TGACAAAGATAATCATGTGCTGACCATCACGGATACGGGTATTGGAATGA
CTAAAGCAGATCTCATCAACAATTTGGGTACAATTGCAAAGTCCGGGACG
GCGGATTTCCTCTCTAAGTTGCAAGACGCGTCCTCTTCTCAAGAAATGTC
TGATCTAATTGGGCAGTTTGGTGTGGGCTTTTACTCTACTTTCTTGGTGG
CTGATAAGGTCATTGTGACCACCAAGCACAATGATGACAAACAATATATT
TGGGAATCAGATTCTGAAAGCTACTCCATTGTTGAGGATCCTAGAGGAGA
TTCCCTCAAGCGTGGGACACAAATATCTCTCTTGATGAAGGAAGAAGCCC
GTGATTATCTCGAGCAAGACACTGTTGACAACCTCATCAAAAAGTACTCT
CAATTTATTAATTTCAACATTTACTTGTGGTCTTCCAAGACTGAAACCGT
AGAAGAGCCTCTTGATGAGGATGAAGAAGTTGCAGCTAAGGAAGAAAAGA
AGGAGGAAGAAGTTACTGAGAAAAATACAGAGGATGAAGATGCTGCCGTC
GAAGAAGAGAAAGATGAAGATAAGCCTAAGACCAAAAAAGTTGAAAAAAC
AACCTGGGATTGGGTTCTTGTCAATYAATCCAAGCCTATCTGGACTCGCA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGGGTGATGAAATTGAAGACTCTGAGTATGATGAATTCTACAAGTCTA
TTACCAAAGATTCAAATGGACCTCTTGCTCATACTCACTTTGTTGCTGAA
GGAGAAGTCACATTCAAGTCTCTTTTATTCGTTCCAGTGAGCCAGGTGAT
TTACTTTTTTTTTTTTTTCTTTCTTAATTAATTATATCTATATTATTATC
CTTTTCTCATTTGTACTCTTCTTTTTGTAGGCTTCTGAATCCTTCAACAA
GTATGGTTCCATCCATGAAAACATTAAACTTTATGTTAGACGTGTATTCA
TCACAGATGACTTTAAAGATATGATGCCCAACTACCTAAGTTTTGTTAAA
GGAGTTGTCGATTCTGATGATTTGCCTCTTAACGTTTCAAGAGAAACTCT
GCAACAACACAAGTTACTGAAAGTAATTAAAAAGAAATTAGTTCGTAAAA
CTTTGGATATGATTAAGAAAATTGATGATGAAAAATATACTTCTTTCTGG
AATGAGTATTCAACCAACATCAAATTGGGGGTTATTGAAGATACAGCTAA
TCGCACTCGCCTCTCTAAGCTATTACGTTTTGTTTCATCCATTGGAAAAT
TGGTGTCACTCTCAGACTATGTTGAAAGGATGAAAGACAAACAGGAACAT
ATCTTTTATATGGCTGGAGGSTCAAAGGATGAAGTCAAAAACTCTCCTTT
TGTTGAGAGACTCTTAAAGAAAGGATATGAGGTTCTCTACTTGACAGAAG
CTGTTGATGAGTACGCCATCTCTGCATTGCCGGAATTTGAAGGAAAGAAA
TTCCAAAACGTTGCCAAAGAAGGATTTAACATTGATGGAGAGACCGATGC
CGTCAAGGAACGTAGGAAGGGGCTAAAGGTATGCATTAGATTCTTATCAT
TTAAAAGTTGCTCAAGTAAACTAACACTTTGAACATTATTTAGGATAAAT
TTGAACCCCTCACCAAATGGCTTCAAGAAGAGTCTCTCAAGGATCATATT
TTGAGAGCTGAAGTATCTGAGAGATTAGAGAAATCACCTTGTGCTTTGAT
CACCTCTCGATTTGGCTGGACTGCCAACATGCAAAGAATTGTGCAATCTC
AAACTCATTCAAAATCTCAAGATATGCAAAAAGACTACTACCTTAGCCAG
AAAAAGGCATTGGAAATCAATCCAAGACATCCCCTCATCAAAGAATTATT
ACGTAGAATCGAAGATAACCCTCAAGATCCTGTTGCTCAGGAAATGGCTC
TTATGATGTTGAATACTGCTACTTTGAGATCAGGTATATAG
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