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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s90 | supercontig | LSalAtl2s90:425228..432730 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012422 >EMLSAP00000012422 ID=EMLSAP00000012422|Name=EMLSAP00000012422|organism=Lepeophtheirus salmonis|type=polypeptide|length=795bp
MDEGLRNEELSERILPTLAVYNVLXSPCPQHVPHRVTASLPKNLTFKAST
TTSSDVGVLGVWATEFIPRGTRFGPMVGDLYTPDNVPSHVEDRKYFWRVY
NGEELAFFIDGKDVQKANWMRNVQPAFQQSSQNLVAYQEGQNIYFLTIHP
VHANTELTVWYCKEFAQRLNYPFSGELMMKTIDVLRIKDQELEEQKXAAI
QYVQNLYQQQKQLQQKQQELLGRVPTVEPIPNRDVPLEYRQTEESSFYPN
SYALKACPEVDSGYNGSPGRSQEGSRSESPGAHIPSTPPQGLDLTQGQKR
SFVEEAPSLEEEASNAYRRHKMKMYKSTSFSSGGSCSSGGSSPDPRSPSP
SSVYTNVMHQDNNNRPCSLVVEDKKRREAHSPNEQLISKNPENPLIYPVD
MKIEPLTPVSPASSSLDCRVFAKKXSPTSSYAVPATPPPANTSSNSNNSI
SIPTVQNDQQPLHXSXLXHTLSQPHPPTSSSQFPPPPPQCVKSESLDVKN
RSIKTELDIKKSMDDSRGYKALPFPLHKKDGKIEYRCDHCEKVFGQLSNL
KVHLRTHSGERPFQCSICPKTFTQLAHLQKHHLVHTGEKPHVCVECRKRF
SSTSNLKTHMRLHSGQRPYICDICQSKFTQFVHLKLHKRLHNNERPFICN
TCNKAYISASGLRXHWKTTTCKPTNEEKSVPDSLLEQQPAARPKLSNDEF
DSDKLDCPSNETEQQQLNHHHHHHHHHHHGGGNNYDNFYPDHRQMTVTPV
LDHVGLANTVLRNSDAKINCNLPNXPTSINHQPPSSIVSTSITCN back to topmRNA from alignment at LSalAtl2s90:425228..432730+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012422-708269 ID=EMLSAT00000012422-708269|Name=EMLSAT00000012422|organism=Lepeophtheirus salmonis|type=mRNA|length=7503bp|location=Sequence derived from alignment at LSalAtl2s90:425228..432730+ (Lepeophtheirus salmonis)
AAAAAGCAGAGTTTTTGGGATTTTTTTTTCATCCTGAATGTTTATATGAA
TCCTTCTCTACATAAATTTATCTTTACAAAAAAACCACAACACCAAAAAA
TCCATCGGCGACTACAAGAACTCTTCCGGAAGATTCAAAAGCATAGCTCA
AGGATTGAAGTATATCAAGACCCTCATGATTTGATTTTTTTTTTGCTAGC
TAAATATAAGAAACATGCTGACCTTTCCCTATTTTTACGTTACTATATAT
ATATTGCTAATTCAGATTCTGGGTTACTGAGTGAGAGAGAGAGGGGAAAA
AGTCAATGCTCTGGTCCCTCCGAATAGACCGATGTACTTTTTTTTTTTTT
TGTGTAGTGAGTATAAATAAGGTCATTGCCCTTACGGCTAAAGAACCGGC
TTTTCTCCTTTCTACTATATGTATACATACTACTATTTAACATTGTTTTT
TTCAGCTGGAGTCTCTCTCAGTCTTTCTTACTTTATGTCTTTGTTCCACA
AAATTTATACATGTATTAAGGAGAAAGACTTTCCTTTTATAAGTCAGTAC
ACTTCAATTTTTTGCCATCTTTTTTAGTGAAAGCATTACGCAAGTATTTT
TAATATACAATTTGCTTTGCAAAAAGTTAATATATAACTATATACAATAT
ATATATGTATGTATGTTCGTTTGGTGTAGAGAAAACTGTTCAGACAGAGA
AGGGGAGAGAGAGAAAGACGGAATGAAGTGAAAGTGAAATTCCCTGAGTC
TCTTCGTGTTTCTTCCCCCTCCCCCCTTTTCGTTCGTTCGTTCTCCTTTT
TGTACAACATAAAATGAAACTAAATTCTTCTTCTCTCTCTATATAAATAT
ATATAGAGTAAAATCTCTATGTAGTAACAAGGTCAATATACCTTACTCCT
CTATGCTTTTGAATTGTCAGAGACATCTTTGCTTTTTTTCCGTTTTTGAT
GAGTTGTAGCCTGAGCTAACATATACATTACMCCCTACCACGCTACATAA
GGAAATCTATTCATCCACCCATTATTATAATCATTCTTTCTGCACAAGGA
GGGTAAGTATCTGATGAACAAACATAATAATACGATATAGGTATGAGAAG
CAACTTAAATCTTAATCCATACAATTATTATTACAAAGGAATTCATCATT
TAAGGAGGTGATCATATCCATATCAACAACTCTCGCCATCAACTCCTTAT
CTAAACTCTCCAGTTGTTGTGGATTCATATTATCATATTCCATACAGTAA
GTAAAGTAGAGTACTATATTCTATTGATATATAACACAAATCATTTTCCC
ATCATTTTATTATGTTTATAAGTACACATATGAAATGATAAAATGAGGGT
TCAATGACACGCGTCAAGGACACCATCAAATCATGATGATTAAAACATCA
AATACATAACTATCTGTATACAATAAATATATTGCACAGTGCTGCTTATA
GGCTATCTATGTATGTATATGACTAATAGTAGTCTGTATTACTTGATCAA
ATTTGCAATAAAAGAGGCCAATAGGAGTGCGAACTCTACACATTATAATA
ATAGTAGTACTTCTTCTCCTCGTTTTTCTCTTGACGCGCTTATATGAAAT
GGAGAGTTTATGAGAAGATGTACGTATAGCGTCATATCTGTTATTATTAT
GTATCAGCTGTCGTCTGTGTTCCCCAACTCCTTCATCTGACATATTCTCT
TCCTTAGTTGTTGGTTCTTCGAGCTGATGCTGTCAGACTCTACTCTCATT
ACATTCATCTTTTGCTTATGATTATAATTATTATTGCCATTGATGTACAT
ACTACGTACGAACAACCGACTATCATGGTGTAGAAGAATCACTCAGTCAG
TCACCTACTTCAAACATACAATTGATATTAATATTTTTAGTTATTACTCC
TGGTACTGTAGTTACTAGTAGTTACACAGTTGGGGCGAACGTCGTGGAGC
GCTCGGAGAGTTCATTGGCCTGTACACTGTTGTTGTCGTTGTCGTCGGTC
TGCCTACTTCTCGTCTTTTTTCTCCCTCTTCAGCTTTAAATAGATTCCTC
ATTGACAGTTTCCTATTCTTCTCCAGCCTTCTATTCATATATGGGTGTTA
TTTATGATATAATTTTTATAAAACTCTTAGATTCACAAATTATTAATTGA
AATTTCAATATCATCCCCCCTTTCAACAGCGATAATATGAATAATAACTT
CCCTTTCTATTCCTTCTCGTTTTTCCCTTCCTTCCTTCTTCCCCCTCCAC
TACTCTCTTCCTTTCTTTTCCCTTTTTCCTTCCTTCATTCTTCTCCTCTT
TCTCTTTCTATTAAACAGACGCAGTAGTATTGTCTATACGTACATTATAA
ATATATGTTTCTGTAAAATAAACTTTTATTTCTCAGCAGCACCAGTAAAT
TCCCTCCCTTCCTTTTGCCAATTCTTGTAGTAGGAGAGGGGGGGGGGGGG
AGATGATCAGTTGCAAATAAAATTAAAGTACAAATTCTGAAACCTCCTTT
CTCAAAACGCTTATTTTTGCTCTTTCAAGGCCTTTTCAGAGCTAGAGAGG
CTCTTTCCTTCGCCTCTATTACTATGTGTATATCTAGAATGGAGCAGATA
CTGGTTTTTTCTTCTCTAGTATTGTGTGTTACTAACTGAGTTCAATGTTC
TTCTTCATAGTTCTCAGATACACAACTGAAAAGGGACAATCCCCTACCAA
ACGCGACGAATAATTAACCAAAGTTTAACAATAGTAATCCCTCCTAATCA
ATCATCGCCACCCATAATACATATGGACGTGAATAATAAGTACATTTACT
CAGCAGAAAATGAATAGAAAGAGAAAAAGTATTTCATGACCATTATTTCC
AAGGTCAAATTACCTACATAACAAATTATATTATTTACAACACCTTCTAA
AAATACAAATTCATTCTGTATATATTGTTGGTTTATAAATCTATTTATAA
ACATCCATAATATGTAATTTGCCTAAGGGGGGCCTCACTTTCATGTTACG
TAAGTCTCCCCCGTCTTCTTTTTCTTCTCCGGTGCCATCTAGGGCCCCTC
TAAAAAAGAAAGAAAAAGGTCAAGTCTACTATAATTGCGATACCATCTTT
TTCCTTGTAAATATTATATAAAAAGTAAATTTGTCAAAAAGTATTTTTTG
ACTAACAACAGAAGGGAGGAGAAAAATATGTAAAAATCCTTTTTTTCAAA
TAAAAATTTGTTAAATATGTGAACGTAGTTGTTAATAAGTTAACTATTAC
TACTATTTCAATGCGGTGTGGAACGAAACATTTTACATTACTACTATTTC
ATATTATTACTTAGAGCGCGCTGCTGATTTAGCAAGCCCGCTGTTGTTAT
TATGAAGGAGGACTGGCGCAAAATGGGAGCATTGCCCTCAAAGTCATCTC
GTTTNNNNNNNNNNNNNNNNTGGAGGGGTCGATGTCTTACATTAATAAAA
AAAGAAGAAGGGAAAAAGAAGAAGAAGAAAAAAAAAAARRATTTGAGTGA
AAAAATGTTGTTGTTTTCCATTCAGTTGAACATTACGTTTTGAACCGTCC
GTGTCTATACAGTTTCTCTGTTCAAAAGAGTATAATTTGCCTGATAACTA
CAATTATTACATAAAAATAAATATTGACTGTTATTATATATATTATTAAA
GGGTCCATGTCCCGCAATTGTTTGCTCGTGGTCCAGTATGATGAAAGTGT
ATTTTAAATCCTCGTCGACTCCTCCAGTTTCTTCATTGATATTTTCTTCA
AGAAAAATAACAGCAACTGCTACTCGATATCTTCTTGTGCATAAAATATA
AATCAAAATCGCATAAAACTTGTTATTTATATATAAAAGAAAGACTCTTT
TTATTAGACGGAAGAGTCATACGATAAGAGTCAACAAAACTCTTCTTTTG
TCTATAATATTATAAATATAACTACAATTTCTCCACGATCACCATGATTC
AAAGGGTAAGGATTGTCACTTGAGAGTGAGAAAGTGTTACCATGTATAAT
AGAGTATTTTTGGAAAATGTGTCTTGTTTTGTGTTGTAATCGTTGTGTGT
TGATGAAAAGGGAAGGTGAATGAACTTTGTTTCTTTTTACTTTATAATAT
TATTATTCTGTTCTCCTTTCACGCAAAAGTCCTCAGCTTTCACTTATATA
TACTTATAAAAAGCGCGTACATATTTTTAAAAAGCCTATTTTGAACATCA
CATAAGTGTTAAAGCACAAACAGACAGCTTTTCCTTCAAAGTACACATCT
TAATCTGGCTTGCAATTTAAACGTTTAAAGATCCTTTAATTAATAGAATT
TTCTTATTTCTAGATGGATGAAGGACTTAGGAATGAGGAGCTCTCTGAAA
GGATTCTCCCAACCCTTGCTGTCTATAACGTGCTGGMCTCTCCTTGTCCC
CAACATGTTCCGCACCGGGTCACAGCCAGCCTTCCTAAAAATCTCACATT
CAAGGCTTCCACGACCACATCCTCAGATGTAGGTGTGCTTGGGGTATGGG
CCACGGAGTTTATTCCACGAGGAACCCGCTTTGGTCCCATGGTGGGGGAT
CTCTACACACCTGATAATGTTCCTTCGCATGTAGAGGATCGTAAATACTT
TTGGAGAGTCTACAACGGGGAAGAACTCGCCTTCTTCATTGATGGAAAGG
ATGTGCAGAAGGCGAATTGGATGAGGAATGTMCAGCCTGCATTCCAACAG
TCCTCTCAGAATCTGGTGGCCTACCAAGAGGGACAAAATATATATTTCCT
CACGATTCATCCCGTGCATGCCAATACAGAGCTCACTGTTTGGTACTGCA
AAGAATTTGCTCAAAGGCTAAATTATCCCTTCTCTGGAGAACTTATGATG
AAGACCATTGATGTACTAAGAATCAAGGATCAAGAGCTTGAAGAGCAAAA
GMAAGCCGCGATTCAATACGTCCAAAATCTCTATCAGCAACAAAAACAAT
TGCAACAAAAACAACAAGAGCTTTTGGGACGTGTTCCCACCGTTGAGCCC
ATTCCAAACCGGGATGTTCCACTTGAATATCGCCAGACTGAAGAATCATC
TTTCTATCCTAATTCATACGCTCTCAAAGCTTGCCCGGAAGTTGACTCAG
GTTATAATGGGTCMCCGGGTCGTAGCCAAGAAGGATCACGCTCAGAATCA
CCCGGAGCCCATATTCCCTCTACACCTCCACAAGGTTTAGATTTGACTCA
AGGTCAAAAGAGATCCTTTGTAGAAGAGGCTCCCTCTCTAGAGGAGGAGG
CTTCTAATGCTTATCGACGCCATAAAATGAAGATGTACAAATCTACTTCC
TTTTCCTCAGGAGGGAGTTGCTCCTCTGGAGGAAGCTCTCCAGATCCAAG
GAGCCCATCTCCATCATCAGTGTACACTAATGTGATGCATCAGGATAATA
ACAACAGGCCTTGCTCCCTTGTTGTTGAGGACAAGAAAAGACGGGAGGCC
CATTCTCCAAATGAACAATTGATATCAAAAAATCCTGAGAATCCTTTAAT
CTATCCTGTTGACATGAAGATTGAGCCTCTTACTCCAGTTTCTCCAGCAT
CCTCCTCTTTGGACTGTCGTGTATTTGCTAAAAAGMCTTCTCCTACAAGC
TCCTATGCTGTGCCAGCAACACCACCACCAGCAAATACATCATCCAACAG
CAATAACAGTATATCTATTCCAACTGTACAAAATGATCAACAACCTCTTC
ACMCCTCAYCCCTACAMCATACACTCTCACAACCACATCCTCCTACATCC
TCCTCCCAGTTCCCTCCTCCCCCTCCTCAATGTGTAAAATCAGAGTCATT
GGATGTTAAAAATCGCTCGATCAAAACAGAGCTTGACATTAAAAAATCCA
TGGATGACTCTCGAGGCTATAAGGCTCTTCCATTCCCTTTACATAAAAAA
GATGGGAAGATCGAGTATCGTTGCGATCATTGTGAAAAAGTGTTTGGACA
ATTATCAAACCTAAAGGTTCACTTGAGAACTCATAGCGGAGAAAGGCCCT
TTCAATGCTCCATTTGCCCAAAGACCTTCACACAATTGGCTCATTTGCAA
AAGCATCATCTTGTTCACACAGGTAAGAAAAATGAGATCATCCTTTCCTT
CCTCATGCAGGCTAGAGCTCAAACTTTTTTTAAATTTATATTTCTAGGTG
AAAAACCTCATGTGTGTGTTGAATGCCGCAAGAGATTCTCCAGCACTTCT
AACCTTAAAACGCATATGCGTCTTCATTCTGGTCAGCGCCCATATATTTG
TGACATTTGTCAAAGTAAATTCACACAATTTGTGCATCTCAAACTCCATA
AAAGGCTGCATAACAATGAGCGACCTTTTATTTGCAATACTTGTAATAAG
GCTTATATCAGTGCTTCGGGTCTTCGTMCCCACTGGAAAACAACTACCTG
CAAACCCACTAATGAAGAGAAATCAGTTCCCGATTCCCTTCTTGAGCAGC
AGCCGGCAGCACGTCCCAAGTTAAGCAATGATGAATTTGATTCAGGTACG
TCTAAAAAACACTTATTTATTATAGTTACATAATATATATTTACTTACTC
CTTCATAATTGTGTTTTACAGATAAGCTTGACTGTCCCTCTAATGAGACT
GAGCAGCAACAGCTGAATCATCACCATCATCATCACCATCACCACCATCA
TGGCGGCGGSAACAACTATGATAACTTCTATCCTGATCATAGACAAATGA
CTGTTACGCCTGTTTTGGATCATGTTGGATTGGCCAACACTGTACTCAGA
AACTCTGATGCAAAAATTAATTGTAATTTGCCCAACMCTCCAACCTCTAT
TAATCATCAGCCCCCATCTTCAATTGTTTCTACATCCATTACTTGCAATT
AATTAATTTTTGAAGAAAAAAAATTAATTTCTTTCAAAGAGACAGAAATA
TTATTTATTTTTATTAATATTATCATTTTATTTGTACCTGATATAAAATT
TCAATAAGACTTACTTTTTTTATAACATTGATACTTTTGGGATTCTTATA
TTATTTTTTTTTTATTCCTCATCTCTTTAGCAAATAATATTAATTTTGAA
AATGAATAAAAAAGCAACAAAACCCTTTTTAAAGCATTTTTACATAAACG
AACTTGAGACGACAGAAAATCAATCCATTTTTGCACTTTTTTTTTGTAAA
TAAGAGTTTTTTTTTCCTCTACCTCAAAAGTTATTAATTTTTTTCTCTCT
CCTCATTGTATTTTTTTACATCATTCTTATCTCCATGAATGATTTTTTTT
TCTTGTCCAAATGTTTTAATATTCGCACCACAGATGAAGTGAAAATAATA
ATTGGCCTTTAAATCATTTTTTAATATCATTGTGATAGAAATTTCTTGAT
GAAAAAAAAAAAAAAAATGCAAAGTAAGATTTAAAAAATCCTTGGGCATA
AACAACGATGTAGTTATCAGTCATTATTCCTCCATTTTTAATTACAAAAG
TAAAACTAAATCCAACCCCCACCCTCCCCTTTTATCCCTACCCCCTTTCA
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