EMLSAT00000012440, EMLSAT00000012440-708287 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012440
Unique NameEMLSAT00000012440-708287
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s914supercontigLSalAtl2s914:10993..13345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012440 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012440EMLSAG00000012440-695206Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055833EMLSAE00000055833-764761Lepeophtheirus salmonisexon
EMLSAE00000055834EMLSAE00000055834-764762Lepeophtheirus salmonisexon
EMLSAE00000055835EMLSAE00000055835-764763Lepeophtheirus salmonisexon
EMLSAE00000055836EMLSAE00000055836-764764Lepeophtheirus salmonisexon
EMLSAE00000055837EMLSAE00000055837-764765Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768944auto768944Lepeophtheirus salmonispolypeptide
EMLSAP00000012440EMLSAP00000012440Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012440

>EMLSAP00000012440 ID=EMLSAP00000012440|Name=EMLSAP00000012440|organism=Lepeophtheirus salmonis|type=polypeptide|length=428bp
MYSRKGCLGVILLCVCSNLAQELIEEEPNGPIDFTNAEVDENGHLCVVKT
KMIETIEKQQVKECWTQNVTQCHDSFVTEFLPMQERQCEDNYWKACKITF
KDKAYNTNLTSCMTPLVRECSPVSGVEPKTVCKTWFESVCNTTYNLRIDP
KSGHENFDPVTWCDKIPQEICAPDHCKMVSGQEECHNKIIESTIKQPKEI
CDLRPSKQCKLVTNLVPHLTSHKVCREIPKEVCHVKDDFPKVVMKPQLLK
WCTRPNGRINKXRQILPGSKNINSQFPETALQQSGPNFSSQSTPLPDNHN
GIESNIRQINQPSFEQSPPSTSYGFSAPSGYGIPSGAPLSDYSSSFDNLN
RKRSPELIALGKGGHHRSERFLLRSELPESKQLINIVLKKPPPHIQRKTF
LPINGNQTESITNIRSIEKVNSEQENSQ
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mRNA from alignment at LSalAtl2s914:10993..13345+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012440-708287 ID=EMLSAT00000012440-708287|Name=EMLSAT00000012440|organism=Lepeophtheirus salmonis|type=mRNA|length=2353bp|location=Sequence derived from alignment at LSalAtl2s914:10993..13345+ (Lepeophtheirus salmonis)
CAATCACAAATCATTCTTTAGTTGGTTTTCTTGTTCACTTAAAAGAGTGT
TGCCTTAGTTTTTAAAATCCTTTAAACCACTTAATTTCATTTAAAGGGAA
AAAAATGTATTCTAGAAAAGGATGTTTAGGAGTAAGAGCCTTCTAATTTT
CTCTTGTTCCTCTATATCCATTGTAATTATCTATTTAGGTTATTTTACTT
TGCGTTTGCTCAAATTTAGCACAGGAGCTTATTGAGGAGGAGCCAAATGG
TCCAATTGATTTCACAAATGCAGAGGTGGACGAAAATGGGCATCTGTGTG
TTGTCAAAACCAAAATGATTGAAACCATCGAAAAACAGCAAGTTAAGGGT
AAGGATTACATTAAAAAAGATGAGAAGTTCACTAATGCTTTTGCTCGTAT
TTTTTTTTTAATAGAATGTTGGACTCAAAACGTCACACAATGTCATGACT
CTTTTGTAACAGAGTTTCTCCCCATGCAGGAAAGACAGTGTGAGGATAAT
TATTGGAAGGCCTGTAAAATCACATTCAAAGATAAGGCCTACAATACAAA
CTTGACGTCTTGTATGACTCCGCTTGTGAGAGAATGTTCTCCCGTATCGG
GAGTTGAACCCAAAACAGTGAGTGTTTGAGATGGCACGTAAGGTATTGTG
TATATGTACCTTATCTGATTTGATTCTAGGTTTGTAAAACATGGTTTGAG
TCTGTTTGTAATACAACTTATAATCTACGGATCGATCCTAAAAGTGGCCA
TGAAAACTTTGACCCTGTCACTTGGTGTGATAAAATACCTCAAGAAATAT
GTGCACCTGGTGAGATTTCTCAACATTTTCTTTCCTTTCATTATGTATAC
TAATTAATATTCGAATAATAATTTCAGATCATTGTAAAATGGTCTCAGGG
CAGGAGGAGTGCCATAATAAAATCATAGAGTCAACTATCAAACAACCAAA
AGAGATATGTGATCTACGACCTTCAAAGCAGTGCAAGCTTGTGACTAATC
TTGTACCACATCTTACTTCTCATAAGGTATGTCGTGAAATCCCCAAAGAA
GTCTGCCATGTGAAAGATGATTTCCCTAAAGTAGTTATGAAGCCTCAACT
TTTAAAATGGTGCACTCGTCCAAATGGGAGAATTAATAAATMCAGACAAA
TCTTGCCCGGTTCTAAGAATATAAATAGCCAATTTCCTGAGACAGCACTG
CAGCAGTCAGGACCCAATTTTTCATCTCAATCAACTCCTTTGCCGGATAA
TCATAATGGTATTGAGTCGAACATCCGACAAATAAATCAACCCTCGTTTG
AACAATCTCCTCCTTCAACCTCATATGGTTTCTCAGCCCCCTCTGGATAT
GGGATCCCCAGTGGAGCACCATTGTCAGACTATAGCTCTTCATTCGATAA
CTTAAATCGTAAACGATCTCCCGAATTAATTGCCTTGGGAAAAGGTGGGC
ACCATCGTTCTGAAAGATTTCTTCTCCGCTCAGAGTTACCTGAGAGCAAA
CAGCTAATAAATATTGTTTTGAAAAAACCACCTCCACACATTCAAAGGAA
AACCTTTCTACCAATCAATGGAAATCAGACGGAATCAATAACAAATATCA
GGAGTATTGAGAAAGTCAACTCTGAGCAAGAAAATAGCCAGTAATAATGT
ACGATAAAAAAGAAAATACGTAGGATCAATTTGTATCATATGAAAAAATA
TATTTTTTTAAATAAATAAATCAAAAATTCATCACAAATGTATATACTAC
ATGTAATATGAGCATTAATTTATAGTATCCAGTGTAAAAATATTGCAATA
AACAGCAATAAAGCAAAAACATATATCATTCGAATAAAAATACACATAAG
AAATCGCAAAATATACAAAATAGGTCACTTAAATCTTGTTTTTGTTTGTT
TTTTGTCTATACTATGAGTGAATAGCTCTTAATTTGATTTCAATATCTTC
GCGATCCTTGAATGATATATAAGGAGATGGATCAACACCGCCAAGGACCT
TTTCCACACTTCTTTGTACTCCAGAAAAGTATAAAACCCCACCGGATTTC
TTGACTGGAACTTCGATACTTCGAAGTGTCTATATAAGTAGTGCAAATTG
AAAATAATTAGATATACAATTAAATGCATCTACATATTATATTAATTAAT
TTGTCTGTCTTTATCTAGAACTGAGGACAACAATGGAGTTCAGTCTCACT
TGTTGGTCCATAAGAAGGAAAATGGATCCCTCGTTGCGTTATTGAGGGTG
TTTTTCCTTTTTTAAATATTCAGTTTTGTATAATTAATTAATTTAAATAA
TAAATGATCGTAATATATTACATTATAATGAAAACATGAATATTGTTTTC
AAG
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