EMLSAT00000012449, EMLSAT00000012449-708296 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000012449
Unique Name	EMLSAT00000012449-708296
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s914	supercontig	LSalAtl2s914:71788..76892 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000012449 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000012449	EMLSAG00000012449-695215	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000055892	EMLSAE00000055892-764820	Lepeophtheirus salmonis	exon
EMLSAE00000055893	EMLSAE00000055893-764821	Lepeophtheirus salmonis	exon
EMLSAE00000055894	EMLSAE00000055894-764822	Lepeophtheirus salmonis	exon
EMLSAE00000055895	EMLSAE00000055895-764823	Lepeophtheirus salmonis	exon
EMLSAE00000055896	EMLSAE00000055896-764824	Lepeophtheirus salmonis	exon
EMLSAE00000055897	EMLSAE00000055897-764825	Lepeophtheirus salmonis	exon
EMLSAE00000055898	EMLSAE00000055898-764826	Lepeophtheirus salmonis	exon
EMLSAE00000055899	EMLSAE00000055899-764827	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto771351	auto771351	Lepeophtheirus salmonis	polypeptide
EMLSAP00000012449	EMLSAP00000012449	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s914:71788..76892-

protein sequence of EMLSAP00000012449

>EMLSAP00000012449 ID=EMLSAP00000012449|Name=EMLSAP00000012449|organism=Lepeophtheirus salmonis|type=polypeptide|length=935bp
TTLGQERNXSLSSSTTISSPPARQRPQRPPSGGFGSLLSGLLGSITQTAD
TSDCPGKCIHALASLVCDQVLEEVKCPNQSLRCCVESDFPPRRKKRPPPP
PPLPVKQQSSNQVQNNQPDIQRLTTNPPLTTTTISTTTRTTTTTTRTTTY
TTPTPTTTEPRRQTPPATTSITNRFQEPVREDSSDYIDYDYPSNDGDRDD
TXAESNGSGTPSCPGVCVAQRLANFCEAILDVNQLCKSDLRCCVAKRVFE
NGNYPPELIIXNXEXPAAAIPVAETTXTTTRRPPPRPKRPPPRQDNSHIC
RGTCVTGFFALLCDEIDQRAPCPGNGRCCITRTPGKPPGHRKPPPRPKEC
PGVCIPQLMSAFCNEPSIIRNTHTCQKGTICCDSRNLNGLNVNAQDRVTL
TTTTTPPPPPPPPLPPQRAPPPPRPYGGSPDLASLFLNVAPTLLNAATGN
SDAGQTAAALLPVLAPVLGSILGGGGGSPQSPPRNPISQPVAPQQAPSLG
SSLAQTFLPALANTFLGGGGGAPPRNSYRPTTTTTTTTTRTTTTPEPADD
RPECPGTCIGPYLSFTCFGNAATTSLFKCEKKKSTCCSPKSAINERESFL
HFKTNQIPIKRNDSVHTSFYENRPQVGPLQKFADNQFNPNDHGNGLFPFP
SNVGSGVNKFHIAKEQRPTLEHPVTNKYVCGVKGTYRSGRVVGGDDASPG
EWCWQVALINSLNQYLCGGALIGTQWVLTAAHCVTNIVRAGDSIYVRVGD
HDLTQKFGSPGAQTLRVATTYIHHNHNSQTLDNDIAILKLHGEADLKEGV
CLVCLPARGTSQQAGKVCTVTGYGYMGESGPIPLRVREAQVPVVNDNECV
RKINAVTEKIFILPASSFCAGGLEGHDACQGDGGGPLVCEDSGYYXLTGL
VSWGFGCGRRDVPGVYVKISSFIGWINQIISVNNV

mRNA from alignment at LSalAtl2s914:71788..76892-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000012449-708296 ID=EMLSAT00000012449-708296|Name=EMLSAT00000012449|organism=Lepeophtheirus salmonis|type=mRNA|length=5105bp|location=Sequence derived from alignment at LSalAtl2s914:71788..76892- (Lepeophtheirus salmonis)
ACAACTCTTGGGCAGGAAAGGAACAMCTCCTTATCCTCCTCTACGACAAT
ATCCTCMCCGCCTGCAAGACAACGMCCTCAGCGGCCACCATCAGGTGGAT
TTGGTTCCTTACTCTCAGGTAAGTTCTACTACTACAACCATAATATGTAA
TATTATCTTCGTCCTGCATTACTCAATATGCAAATCGTACATACTATGAG
GCATACCTATGTTCTACCTATGAATGTATGTTGAAATGTCTGTTCAATTT
CGTGGAAGGGCATTATTCACATATGCCTTTAACCTATATACATTTATTTT
TTTAAATAATGGTTTTTTTCTCTTTCTCTTTTTTGCTTTTAATTAATGGT
AGTAGGTATTGTAATAATAATAAATAAATAACATTCAGGCCTTCAGGTCA
GTAGGATTTTTTCCTCTCTATTATTTTTTATCATCTCCCTTCAAATTATA
ACTGTTGTTCATTTTTCTGAAAGGAAAATTAAATGAAGAAGAGAGAGTGA
GCGCGGCGACCTATGTATGTTCCGATCAGCAGCAGGCTTGTTGATGTTGC
CTACAACTTTCTTTTTTATTCTTCTGTTCTTCGTGATGATTTATATTGAC
CTATATATCCATGACTTGATCTTTTTTTCTTCTTGTTCTTTTTTTAAGGC
AAGAATGGTTCTTGGGTATTCATTTTTATTTTTTCTGTCAATTTTTACCT
CATCTGTCTTCCATCATTGCTGCTTAGTCCCCCCCCCCTTCTTTTTTAAG
GAGTGTTATTTGGGTACTTGAAGAAAATATTCAAGTATATGTATGTATAT
TTTTTTAGATTCACTTGGACGGTATAGAAAGGGAAAACCATAAGTAGTGA
GATCATTTGAAGCTCTCTTGTTGGTGGGAAACCGGTTCATCAATCAGACT
GACCTATTTTCTTATTTTCCTTCCATCCCATTTTAGTCTTTATTACTTAT
AAAATAGCTGTTCATTAGCATATGACCACAGGTCTGAAGCATATGGTCCT
CTCTCTCTCTTTCTTTCTAACTTCCCAATTTACTTTCACATTTACACAAG
CAAAAAACACAACATATTTTAAAAACAAATATACAGACAAAAAGAAATAC
CTTTAATTACGGGTATACTCACAAATTCAAATAAGTTGGATGTATATGAC
TTTCAACATCTCCTTCTTCCAGGTTTATTAGGCTCCATTACGCAAACAGC
TGACACAAGTGACTGTCCAGGAAAGTGCATCCATGCACTTGCAAGTCTTG
TTTGTGATCAGGTCTTGGAGGAAGTCAAATGTCCAAATCAAAGTCTAAGA
TGCTGCGTAGAGTCCGATTTCCCTCCTCGGCGGAAAAAGCGGCCTCCCCC
MCCTCCCCCGCTACCAGTTAAGCAACAATCTTCAAATCAGGTACAAAACA
ATCAACCCGACATACAAAGACTTACTACAAACCCCCCCTTGACAACAACA
ACCATTTCAACCACGACAAGAACGACAACAACAACGACAAGGACCACAAC
CTATACAACCCCTACACCTACCACAACAGAACCTAGACGACAAACTCCTC
CTGCAACTACCTCTATCACCAATAGATTCCAAGAGCCCGTCAGGGTAAAT
ACTCCTGTCTATTCCTATTCCTGTTTATTCCTGAATATCCAAACTCTACA
AAAACTAATTCTATTTTTTCCCCTTCTAATTTCAGGAGGATTCTAGTGAC
TACATTGACTACGATTATCCATCTAACGATGGTGACCGGGATGATACAMC
CGCCGAATCTAACGGATCTGGCACTCGTAGGTTAACTTTTCCATGCACCT
ATTTATTAACCATCTTTTTTCTACTCATTCCATCTCTATCTTTAGCATGA
TCATATATACAATTTTTATAAGTTATAGCTGAACTTTTCATTTCTCAAGT
AAAAAGTAACAATTGTATATCATCACAAGTTTTTTTATATCTTAGAATGT
ACATTCAATTCAAATGTGACTCTGATCATTATAGCCCCCTGTAGTTTAGT
CCATCCTCACACTATACTTTAATTCACATCTTTTTATTGTATGCATACAA
ATATTGTATGGTACATACATTTAGAAAACAGCACCCACGTTATGCTGCAC
CTATTCGGCGTTGTATCCACAAAGGTTGTTTCCATAGTATGCATTTTCTC
ATTAAAAAAATGAGCTGTATTTTGATATTTTAAGATCCAAATATATACAA
AAAGTTACAAATATATTATATGAACTACAGGGGTATCATGATTTTAAATC
CAATTGAATTGGGTGTGTTCAAACTATGTAGTCCACAGATTTTATATTGT
TTGTTATTTAATAGCCTCATGTCCCGGTGTTTGTGTTGCGCAAAGATTGG
CAAATTTTTGTGAGGCTATTCTGGATGTGAATCAACTCTGTAAATCTGAT
TTACGTTGTTGTGTTGCTAAAAGAGTCTTCGAAAATGGAAATTATCCACC
TGAGCTCATAATTCAMAATAAKGAGTYCCCTGCCGCTGCCATMCCCGTTG
CTGAAACAACAMCAACCACAACCAGAAGACCCCCACCAAGACCTAAGAGG
CCTCCACCTCGACAAGATAACAGTCATATTTGCCGAGGGACTTGTGTGAC
AGGGTTTTTTGCTCTACTTTGTGATGAAATAGATCAACGTGCTCCCTGTC
CTGGAAATGGAAGATGCTGCATTACTCGAACCCCAGGTAAGCCCCCTGGT
CATCGCAAACCTCCGCCAAGACCCAAAGAGTGTCCTGGAGTTTGCATTCC
TCAGCTCATGTCTGCATTCTGTAATGAACCTTCTATTATCCGAAACACCC
ATACTTGTCAAAAGGGAACCATATGCTGTGACTCTCGTAATCTCAATGGT
CTGAATGTAAATGCACAAGATCGAGTTACTCTCACAACAACCACAACGCC
ACCACCTCCTCCTCCCCCACCTCTMCCTCCACAGCGTGCTCCCCCACCAC
CCAGACCATATGGTGGATCTCCGGATCTTGCATCTCTTTTCCTCAATGTG
GCACCAACACTCCTCAATGCAGCAACAGGAAACAGTGATGCAGGACAAAC
GGCAGCCGCTTTGCTTCCCGTCCTTGCACCTGTCCTTGGATCCATCCTTG
GGGGAGGAGGTGGTAGTCCTCAATCCCCACCAAGAAATCCAATTTCTCAG
CCTGTTGCACCCCAACAAGCTCCTTCTTTGGGATCATCATTGGCTCAAAC
CTTTCTACCTGCATTGGCAAATACATTCCTTGGAGGAGGAGGTGGAGCAC
CACCTAGGAATTCTTATCGMCCCACAACCACTACTACTACAACAACCACG
AGAACTACTACCACACCAGAACCTGCTGATGATAGACCAGAGTGTCCTGG
AACCTGTATTGGACCCTACTTATCCTTTACTTGCTTTGGTAAGTTCCCAT
TTCTTAATCATAATATTAGGTTTAAAATCATCGAATGTGTAACATTTATT
TTTGATTACAAAAATAGAAACTTTATCCTATTAAGGAGGATATACCTTTA
AAAAAATGACTGTTGAAAGGCTTAGAATTTGTTTCTAAATAAGTAAAATG
GATTAATTGATATGGAATATTAATAAATTTTTCTCATGCATAAAAAATTC
TTCAAAAATAAAGTTGTGAAATGTTATTGTTATCATTTGATTGCTTTTAA
AATGACTACCTGTCATCATTATTATACGTATGTTTTGATGAAAGACATAG
GTACATTGGAATATTTACTTTCATTATTATAAGTGAAATGAAATGAAACG
AAAATGAAACAAGGACACATTTTATTTTTCATTTACTTCAGGAAATGCTG
CAACCACAAGTTTATTCAAATGTGAAAAGAAAAAATCAACATGTTGCTCT
CCCAAATCAGCCATCAACGAAAGAGAATCCTTCCTTCATTTTAAAACCAA
TCAAATCCCTATCAAAAGAAACGACTCTGTTCACACGTCCTTTTACGAAA
ACCGACCTCAAGTTGGACCTCTTCAGAAATTTGCTGATAATCAATTCAAT
CCCAATGATCATGGAAATGGTCTCTTTCCCTTCCCCAGCAACGTTGGCAG
TGGTGTGAATAAGTTTCATATTGCGAAGGAACAACGGCCTACTCTGGAAC
ATCCCGTCACAAACAAATATGTTTGCGGTGTTAAAGGAACTTATCGATCT
GGACGTGTGGTTGGAGGAGATGATGCCTCTCCTGGAGAGTGGTGCTGGCA
AGTAGCACTTATCAACTCTCTCAATCAATACCTCTGTGGAGGTGCTTTGA
TTGGAACACAATGGGTCCTCACTGCGGCACATTGTGTTACAAAGTAAGTA
GACATACCTTATCACCAAATATTTAGCTAGAACATATTCTTATGAGTTGT
TTTGTTTTTTCTTGAATATTCAGCATCGTAAGAGCTGGTGACTCTATTTA
TGTTCGAGTAGGGGATCACGACTTGACACAAAAATTTGGAAGTCCTGGAG
CACAAACTCTTCGTGTTGCCACAACCTATATCCATCATAATCACAACTCT
CAAACCCTAGATAACGACATTGCAATTCTTAAACTTCATGGCGAAGCGGA
TTTGAAGGAAGGTGTCTGCTTGGTTTGTCTTCCTGCACGAGGAACAAGTC
AGCAAGCAGGGAAAGTGTGTACCGTTACAGGTTATGGTTACATGGGAGAA
TGTGAGTTTCAATTTCTTTATTCCCCTTTTTTTAAATAAGACATACATTG
TATTAACAATATTATTGTAGCGGGTCCCATTCCATTGAGAGTAAGAGAGG
CACAAGTTCCGGTCGTGAATGACAACGAGTGTGTTCGTAAAATCAATGCA
GTAACAGAAAAGATATTCATTCTCCCTGCATCCAGCTTTTGCGCTGGTGG
GTTGGAGGGACATGACGCATGCCAAGTGAGAGATCCCATCCCCGATATCC
ATAAATATTCTACTTTCATTTTTTTATTACTTTACAGGGAGACGGAGGAG
GTCCATTGGTGTGTGAGGATAGCGGTTACTATKAGCTTACTGGTCTTGTA
TCTTGGGGATTTGGTTGTGGAAGGAGGGACGTTCCAGGTGTTTATGTCAA
AATATCTTCTTTCATCGGATGGATAAATCAAATCATTAGTGTCAACAATG
TTTAA

Add to Basket

Search form