EMLSAT00000012488, EMLSAT00000012488-708335 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012488
Unique NameEMLSAT00000012488-708335
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s91supercontigLSalAtl2s91:475359..477762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012488 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012488EMLSAG00000012488-695254Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056088EMLSAE00000056088-765016Lepeophtheirus salmonisexon
EMLSAE00000056089EMLSAE00000056089-765017Lepeophtheirus salmonisexon
EMLSAE00000056090EMLSAE00000056090-765018Lepeophtheirus salmonisexon
EMLSAE00000056091EMLSAE00000056091-765019Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777996auto777996Lepeophtheirus salmonispolypeptide
EMLSAP00000012488EMLSAP00000012488Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012488

>EMLSAP00000012488 ID=EMLSAP00000012488|Name=EMLSAP00000012488|organism=Lepeophtheirus salmonis|type=polypeptide|length=445bp
MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPNGQYAGTTDLQLERIDVY
YNEAGNSKYVPRAILIDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNN
WAKGHYTEGAELVXSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL
LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETY
CIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL
RKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTXAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVK
TAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG
EGMDEMEFTEAESNMNDLVSEYQQYQEASVDDDEYFDEEGEAEVE
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mRNA from alignment at LSalAtl2s91:475359..477762-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012488-708335 ID=EMLSAT00000012488-708335|Name=EMLSAT00000012488|organism=Lepeophtheirus salmonis|type=mRNA|length=2404bp|location=Sequence derived from alignment at LSalAtl2s91:475359..477762- (Lepeophtheirus salmonis)
ATGAGAGAAATCGTTCACATTCAAGCCGGTCAATGCGGAAACCAAATTGG
AGCTAAAGTAAGCCTTCTCGACTTCTACACATTTTTTGAATAGGATTAGT
AAAAAAAGTGGTGGTGTTCGTTAGTCCTGCGCCATTTTGTTTTTTCCCTC
CCTTYTTCATTTGAACAATGTTCGTTAATTTTTTTTTTTTTTTTGGTCGC
TCTTTTTTTCAAACGAATTTCTGTTAAATCTGATTGGTTCAGGCGTAGGA
TGGGGATTGGGTGGTTAAAAGTAAGGAGGGCGTCGCCCTCGATCCTCCAT
GATGAATAATATTCCATCATGATAAAATAATCGTACTTGAAAAGATGGTT
CGGGTGGAATGTGCGAGGTGCATTAGAAAGTGGTATGAGGAGGAAGATGA
AAAACTACTGAATAGAAGGGGTGAACCGTTAGGTAAAAAGAGAAACTGAG
GCCTAAATTTAGCGAGTAGTCATTACCTGGGGTGTTATATTATAGGAATT
TAAAATGGATGAATAGAAAATGACTTGAGATGTGAGAGTGAGTCATGGTG
TTCGGAGGAGTAGGAAGTAGTTTGTGAGTCAAAAGAGGAAGGGGGGGGGG
GGCTATAGKGAAAGAGAWGAAGCCGCAAATATTTAATATCATGAGCGCAC
TTAATGATGCCGCTCTCTATTTGGAGGTCGAATGACTCATTTCTTCAAGG
GAACAAAAGGGACTTCCTTCCTTGATTTCTTTCTTTCTTTTGAAAAGGGG
ATGAATTGATCTTGGACGCATATGTTTCTTTGAAATGGGTGTGATGGCTT
AAAGCAATGAGCAAGAGGTGGAGGGGGGAAAGGAGGGAAGTGAATGATAA
ATGAGTGGGTGGGKGAGAGGGAGGAAAGTTAACTACATGCAAAGAGCAGG
GGATGTTAAATGAGAGGCTAGKAGTGGGTGTGGTTGATTCATACCTTCGA
ATCTCCTGATCTTTGTAATAACAACTCTTAATTATTTACCCCTGCTAGTT
CTGGGAAATCATCTCCGACGAACATGGAATTGACCCCAATGGCCAATATG
CTGGCACCACAGATTTACAATTGGAGCGTATCGACGTCTACTATAATGAA
GCCGGAAACTCAAAATATGTGCCCCGCGCCATTCTGATTGATTTGGAGCC
AGGAACCATGGACTCTGTCCGATCTGGACCCTACGGTCAAATCTTCAGAC
CTGACAACTTTGTCTTTGGTCAATCTGGTGCCGGAAACAATTGGGCTAAG
GGGCATTATACAGAAGGTGCTGAATTAGTAGMCTCTGTTTTGGATGTTGT
GAGAAAGGAAGCCGAATCCTGTGACTGTTTACAAGGCTTCCAACTGACCC
ATTCCTTGGGTGGTGGAACTGGCTCCGGTATGGGAACTTTACTCATTTCC
AAGATCCGTGAAGAGTATCCCGACCGTATCATGAACACATACTCCGTTGT
TCCTTCCCCCAAAGTATCAGACACCGTTGTGGAGCCCTACAATGCAACCC
TCTCAGTCCATCAACTAGTTGAAAACACAGATGAAACATACTGCATTGAT
AATGAGGCCCTCTATGACATTTGCTTCAGAACCTTGAAGTTGACCAACCC
CACCTATGGTGATTTGAACCATTTGGTCTCCCTTACCATGTCTGGTGTCA
CCACCTGTCTCAGATTCCCCGGTCAACTCAATGCTGATCTCCGTAAGTTG
GCTGTCAACATGGTTCCCTTCCCACGTTTACATTTCTTCATGCCCGGATT
CGCTCCCTTAACTGCTCGTGGATCCCAACAATATAGAGCTCTCACAGTTC
CTGAACTTACCCAACAAATGTTCGATGCCAAGAACATGATGGCTGCCTGC
GACCCCAGACACGGAAGATACCTTACCSTCGCAGCTGTCTTCAGAGGACG
CATGTCAATGAAGGAGGTTGACGAACAAATGTTGAATGTACAGAACAAAA
ACTCAAGGTACACATCTCTCACTTTCTATTCTGAATCTCTAATTATTATT
ACTATTTTCCTTATAGTTACTTCGTCGAATGGATCCCCAATAACGTCAAA
ACCGCTGTCTGTGACATTCCTCCTAGAGGTTTGAAGATGGCTTCCACCTT
CATTGGCAACTCCACTGCCATCCAAGAGCTCTTTAAGAGAATCTCAGAAC
AATTCACCGCCATGTTCAGAAGAAAAGCTTTCTTGCATTGGTACACTGGT
GAGGGCATGGACGAGATGGAATTCACAGAAGCTGAGAGCAACATGAACGG
TGAGTTGTTGCTTACTATCTATTTCATTGCAACAGTTGTTTTATCAACAT
ATTTTTCCCCTTTAGATTTGGTTTCCGAATATCAACAATACCAAGAAGCT
TCCGTTGATGATGATGAATACTTCGACGAGGAGGGAGAAGCTGAGGTTGA
ATAA
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