EMLSAT00000012505, EMLSAT00000012505-708352 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012505
Unique NameEMLSAT00000012505-708352
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s921supercontigLSalAtl2s921:15362..16768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012505 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012505EMLSAG00000012505-695271Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056174EMLSAE00000056174-765102Lepeophtheirus salmonisexon
EMLSAE00000056175EMLSAE00000056175-765103Lepeophtheirus salmonisexon
EMLSAE00000056176EMLSAE00000056176-765104Lepeophtheirus salmonisexon
EMLSAE00000056177EMLSAE00000056177-765105Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769209auto769209Lepeophtheirus salmonispolypeptide
EMLSAP00000012505EMLSAP00000012505Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012505

>EMLSAP00000012505 ID=EMLSAP00000012505|Name=EMLSAP00000012505|organism=Lepeophtheirus salmonis|type=polypeptide|length=364bp
MAXMNVLMPVAGXIKARFRGAKADIDSPFFKLHYRTTATIMFISCILVTC
NDFFGSTINCISNTIPGNVMNTYCWIMSTFTVPSLNAAGHGKEYAHQGVQ
NYIPGETPKTHHAYYQWVPFVLFLQGVLFYFPHYLWKVFEDRKLDKITKD
LRGRTLSLEQRSKQCDDLIRYIDETFHTHNFYAFKYFMCDFINLINVIVQ
MYIINSFLGGVFMAYGTDVLAWSEADPETRTDPLQEVFPRITKCEFMIYG
RSGTIERHDAMCLLALNIINEKIFIFMWFWFXFLAVVTSLYMLYVIAVIS
IPSMRKYMLERNSKNLHTDTDMNILTDKAEMGDWFLIFLLSRNLDSVLFN
DFIIRLAERLKNKA
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mRNA from alignment at LSalAtl2s921:15362..16768-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012505-708352 ID=EMLSAT00000012505-708352|Name=EMLSAT00000012505|organism=Lepeophtheirus salmonis|type=mRNA|length=1407bp|location=Sequence derived from alignment at LSalAtl2s921:15362..16768- (Lepeophtheirus salmonis)
ATGGCTGKCATGAATGTATTGATGCCCGTGGCTGGGSTGATTAAAGTAAG
AATCCATACTATTAATATATGTAGCTTTATGTTTAAATAATTGTTTCTTT
CTTTTAGGCCCGGTTCCGTGGAGCAAAAGCTGACATTGACTCACCTTTCT
TCAAGCTTCACTATAGAACCACAGCTACTATTATGTTCATTTCTTGTATC
CTTGTGACTTGTAATGACTTTTTCGGAAGCACGATTAATTGTATTAGTAA
TACAATTCCTGGAAATGTAATGAACACTTATTGTTGGATTATGTCCACTT
TTACGGTGCCAAGTATGAAATTTGAAGAAAAAGTAAATGACCTTGAATAA
ATCATACTCTTTTGTGTGCATTTTCCAGGTTTAAATGCCGCTGGACATGG
AAAGGAATACGCTCATCAAGGTGTACAGAATTATATTCCTGGAGAAACTC
CCAAGACTCATCATGCCTACTATCAATGGGTGCCCTTTGTGCTTTTCTTG
CAAGGTGTCCTTTTTTACTTTCCTCATTATCTTTGGAAAGTGTTTGAGGA
TCGCAAGCTTGACAAAATTACTAAAGATCTCCGTGGACGCACTCTCTCCC
TTGAACAAAGAAGCAAACAGTGTGACGATCTTATTCGTTATATTGATGAA
ACATTCCATACTCATAACTTCTACGCTTTTAAATACTTCATGTGTGACTT
CATCAACCTTATTAACGTGATTGTTCAAATGTACATCATTAATAGTTTCT
TAGGTAAGAGATTTATCTATTTATACCATGAAGGAATATTTGCAATTTGT
TTCTGTTGGATATTCCCATGAAATTCCACTAAATTCAGTTACAGGCTGGG
GGTATATTTTTGTTTAAATGAAAGAGTCTATCATCATTTCTTAAATGGTA
TCAACTTACATATTCATGTTACGTTATACTTAAATAGGAGGAGTCTTTAT
GGCTTATGGAACTGATGTCCTTGCCTGGTCTGAAGCTGACCCTGAAACAC
GTACTGATCCCTTACAAGAGGTTTTCCCTCGTATCACCAAATGTGAATTC
ATGATTTATGGACGATCTGGTACGATTGAAAGACATGATGCCATGTGTCT
TTTGGCTCTCAACATCATCAACGAAAAAATTTTCATTTTCATGTGGTTTT
GGTTCWTTTTCYTAGCCGTTGTGACATCCTTGTATATGCTCTACGTGATT
GCTGTCATTTCTATCCCTTCCATGCGCAAGTATATGTTAGAAAGAAACTC
CAAGAACTTGCATACTGATACTGACATGAACATCTTGACTGACAAGGCTG
AAATGGGAGATTGGTTCCTTATTTTTCTTTTGAGTCGAAATCTTGACTCT
GTTCTTTTCAATGACTTCATCATCCGATTAGCTGAAAGGCTAAAAAATAA
AGCATAG
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