EMLSAT00000012513, EMLSAT00000012513-708360 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012513
Unique NameEMLSAT00000012513-708360
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s921supercontigLSalAtl2s921:227443..228842 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012513 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012513EMLSAG00000012513-695279Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056214EMLSAE00000056214-765142Lepeophtheirus salmonisexon
EMLSAE00000056215EMLSAE00000056215-765143Lepeophtheirus salmonisexon
EMLSAE00000056216EMLSAE00000056216-765144Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774885auto774885Lepeophtheirus salmonispolypeptide
EMLSAP00000012513EMLSAP00000012513Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012513

>EMLSAP00000012513 ID=EMLSAP00000012513|Name=EMLSAP00000012513|organism=Lepeophtheirus salmonis|type=polypeptide|length=340bp
MAVNTNYNDQSNTSPVDQILKDWAKVEDQNLAEKIHFEEIKSHLSENKRK
NIQIREDFPKALLEQEHEFQLQLEEACACDMLDPTPKVKYNDNEYKVELA
RPAMIQDDEPIYENTSRGAGMIQASDSVFQALSYSDIASSRKAEEILKQE
QEDEKLAKRLQSSENSFDETKDYKYALRLQEKERAKIARAKERSRIKKLV
LENAKAQNTATIAEVPAPITTTEPLDIVIAPESQSXENXXKDTTXEPQKQ
ELSESQKHLLEKYKQRLDQYDDIVPPYMPMQCQSGKKSLALEDKLKKRKE
KEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSQQ
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mRNA from alignment at LSalAtl2s921:227443..228842+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012513-708360 ID=EMLSAT00000012513-708360|Name=EMLSAT00000012513|organism=Lepeophtheirus salmonis|type=mRNA|length=1400bp|location=Sequence derived from alignment at LSalAtl2s921:227443..228842+ (Lepeophtheirus salmonis)
ATTTTTTTTTAAATTTTTCCAGGCTTGCGCTTACTCTTACCTGTGGTATG
CAGCTTAGTTATTATACCTTATTTAAACCTTAGTCTCAGTCACTTTATAT
TTTATTTCATTCTCTAGAGACAGTAACTACCACTTGATAATAATAAATCT
AAAGCTACTGAGACAAAACCATGAAAAAGAAGTCATTTTGATTCTCTTCG
CTCATTGATATTTCAATAAACGACAATCAATCGCCATGGCAGTCAACACA
AATTATAATGATCAATCGAATGTATGTAAACATCTAATACTAAATACTTT
TCAAAATTGTCATTAATAAGTTTTTCCGCCTTTAAAGACGAGTCCTGTGG
ATCAAATATTAAAGGATTGGGCAAAAGTTGAAGATCAGAATTTAGCTGAA
AAAATTCATTTTGAAGAAATAAAGAGTCATCTTAGTGAAAATAAGAGAAA
AAATATCCAAATAAGGTATATGAATTCAGATATTACCTATATATTAATTA
ATTAATTTTTGATACCTCATGTAAATCATTTATTCTTACAGAGAGGATTT
TCCAAAAGCCTTACTCGAACAAGAACATGAGTTTCAACTCCAACTTGAAG
AAGCTTGTGCCTGTGATATGTTGGATCCAACTCCAAAAGTAAAATACAAC
GATAATGAATATAAAGTGGAGTTAGCACGCCCAGCCATGATACAAGATGA
TGAACCCATTTATGAAAATACATCCAGAGGAGCAGGTATGATACAAGCCT
CAGACTCAGTGTTCCAAGCTCTTAGTTACAGTGATATAGCATCTTCAAGA
AAGGCAGAAGAAATATTGAAACAGGAGCAAGAAGATGAAAAATTAGCAAA
AAGGCTTCAAAGTTCAGAAAACTCATTTGACGAAACGAAGGACTATAAAT
ATGCTCTACGTTTACAAGAAAAAGAGAGAGCTAAAATAGCTAGAGCCAAA
GAGCGGTCACGAATAAAGAAACTAGTTTTGGAAAACGCCAAAGCTCAAAA
CACCGCAACGATTGCTGAAGTACCTGCACCCATCACCACTACTGAACCTC
TTGATATAGTCATAGCTCCCGAATCACAATCTGKAGAAAATYAATKAAAA
GATACGACAAASGAGCCTCAAAAGCAGGAGCTTTCAGAATCTCAAAAACA
TCTGTTAGAAAAATACAAGCAACGTTTAGATCAGTACGATGATATTGTTC
CTCCATATATGCCTATGCAATGTCAGTCTGGYAAAAAGTCATTAGCCCTC
GAAGACAAACTAAAGAAGAGAAAAGAAAAGGAAGGCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTCTCAGCAATAA
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