EMLSAT00000012514, EMLSAT00000012514-708361 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012514
Unique NameEMLSAT00000012514-708361
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s921supercontigLSalAtl2s921:229691..231142 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012514 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012514EMLSAG00000012514-695280Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056217EMLSAE00000056217-765145Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774956auto774956Lepeophtheirus salmonispolypeptide
EMLSAP00000012514EMLSAP00000012514Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012514

>EMLSAP00000012514 ID=EMLSAP00000012514|Name=EMLSAP00000012514|organism=Lepeophtheirus salmonis|type=polypeptide|length=483bp
MNRKKKKCCSSSWEEEDEEDEVVEEPRSKLRTRKLDKMEEMLKKERVLLR
KMSGIFKKAPEGRDASETALLQRHPQLLEVVSQRASKRETELIRRQEIAD
PLDMMEKKCIKLAEAIRKSKSLVVYTGAGISTAANIPDYRGPNGVWTRLE
KGLDIGEYHLERSEPTLTHMALFSLFKRGKLKHIVSQNCDGLHLRSGIPR
HSLSELHGNMFIEICKRCRPMRPFVRLFDVTERTSKNRHSTKRRCYVCGN
SLVDTIVHFGERGSLKWPINWDGASKAADRADVILCLGSSLKVLRRYPWL
WCMDKPKNERPKLFIVNLQWTPKDKHATLKLNGRCDEIMKRVFDHLKLDV
PSYYSLNDPLLSFATRLNALELHTTSKTPLCDLPHIKEEKALQKIKEAID
FDHNYTSFEEFPRKRQSRVKSNIVIGXXKKXKPIDFKSISWPRDALYLTY
ENKFEFMENKDDKDELSFPCDCCDPAKKKRYKL
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mRNA from alignment at LSalAtl2s921:229691..231142-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012514-708361 ID=EMLSAT00000012514-708361|Name=EMLSAT00000012514|organism=Lepeophtheirus salmonis|type=mRNA|length=1452bp|location=Sequence derived from alignment at LSalAtl2s921:229691..231142- (Lepeophtheirus salmonis)
ATGAATCGCAAGAAGAAGAAATGTTGTTCGTCCTCTTGGGAGGAGGAGGA
TGAAGAGGACGAGGTGGTGGAGGAGCCTCGTTCCAAGCTCCGTACCCGAA
AACTTGACAAAATGGAGGAAATGTTGAAAAAGGAGAGAGTCCTTCTTCGA
AAGATGAGTGGCATCTTCAAAAAAGCCCCCGAGGGACGAGATGCGAGTGA
GACAGCTCTTTTGCAAAGACATCCCCAGCTCTTGGAAGTAGTGTCCCAAA
GGGCCTCCAAAAGAGAAACGGAACTGATTCGAAGACAGGAAATTGCTGAT
CCTCTGGATATGATGGAGAAGAAGTGTATCAAGTTGGCTGAGGCCATTCG
AAAGTCCAAGTCACTGGTGGTGTACACCGGGGCTGGTATTTCAACAGCTG
CTAATATCCCTGATTATCGAGGTCCTAATGGTGTGTGGACCCGCTTAGAA
AAAGGGCTGGACATTGGGGAGTACCATTTGGAGAGATCTGAGCCCACGCT
AACGCATATGGCACTCTTCTCACTCTTCAAAAGGGGGAAGCTCAAGCATA
TTGTGTCACAAAACTGTGATGGACTTCATCTTCGTTCAGGAATTCCTAGA
CATAGTCTTTCAGAACTCCATGGGAATATGTTTATCGAAATTTGTAAGAG
ATGTCGTCCCATGAGACCTTTTGTTCGTTTATTCGATGTCACAGAGAGAA
CCTCAAAAAATAGACATTCTACGAAGCGTCGTTGCTACGTGTGTGGAAAT
TCCTTGGTGGACACCATTGTTCATTTTGGAGAAAGAGGCTCTCTAAAATG
GCCCATCAATTGGGATGGTGCTTCCAAAGCTGCTGATCGAGCAGATGTCA
TTCTTTGCTTAGGATCTAGCTTGAAGGTTTTGCGCCGCTATCCCTGGCTT
TGGTGTATGGATAAACCTAAGAATGAAAGACCCAAGTTATTTATTGTTAA
CTTGCAATGGACACCAAAAGATAAACATGCAACTCTCAAGCTTAATGGAC
GCTGTGATGAAATCATGAAAAGAGTATTTGATCATCTTAAGCTGGATGTG
CCATCCTATTATTCCTTAAATGATCCTTTACTCTCATTTGCTACAAGGTT
AAATGCTTTAGAGTTGCATACTACCTCAAAAACTCCTCTCTGTGATCTAC
CCCATATTAAAGAAGAGAAGGCCCTTCAAAAAATTAAGGAAGCAATAGAT
TTTGATCATAATTATACATCTTTTGAAGAATTTCCAAGGAAAAGACAATC
TAGAGTCAAATCTAATATAGTTATTGGAMAATAWAAGAAGAGMAAGCCAA
TAGACTTTAAAAGTATTTCTTGGCCAAGAGATGCTTTATATTTAACGTAT
GAAAATAAATTTGAATTCATGGAAAATAAGGACGATAAAGATGAACTATC
CTTCCCCTGTGATTGTTGTGATCCTGCTAAAAAGAAGCGTTACAAACTAT
GA
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