EMLSAT00000012535, EMLSAT00000012535-708382 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012535
Unique NameEMLSAT00000012535-708382
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s923supercontigLSalAtl2s923:120555..122119 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012535 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012535EMLSAG00000012535-695301Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056326EMLSAE00000056326-765254Lepeophtheirus salmonisexon
EMLSAE00000056327EMLSAE00000056327-765255Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772645auto772645Lepeophtheirus salmonispolypeptide
EMLSAP00000012535EMLSAP00000012535Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012535

>EMLSAP00000012535 ID=EMLSAP00000012535|Name=EMLSAP00000012535|organism=Lepeophtheirus salmonis|type=polypeptide|length=334bp
MGSEERLCLRWDDFELNFKNGFSQXRHDEELFDIXLATASNQIKAHKVIL
SSCSPFFRSLIMSLSSHQHPLLYLSGINFKHLESLMSFMYKGEVHVGQEE
LDDFLKVAQELKIKGLCASTPDKMDRINAVSPLPKHKKTSTHSSSGVESI
ILKKETSIPSKTLVEDNEIEILSDVDQDIQPTDNEMQSIEDSVNIINHDE
GLSSSFECEDNKDFITYQDHESMKDSNFLMIPGVSDARSSLDDNEEYVRA
LNLEISKFVVDKDMNGNFRCKRCSYVSPRRDTIRAHIEAIHFITSGFKCN
ICQRTFKTRQSLKTHKLKYHKPGPVLFRKEQFNW
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mRNA from alignment at LSalAtl2s923:120555..122119+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012535-708382 ID=EMLSAT00000012535-708382|Name=EMLSAT00000012535|organism=Lepeophtheirus salmonis|type=mRNA|length=1565bp|location=Sequence derived from alignment at LSalAtl2s923:120555..122119+ (Lepeophtheirus salmonis)
CAGAATTCAAAATATATAGGATCCGCAGGCTCTGTAAAACCAACCAGCGT
ATCACTAATGCATAAGTATTGATTTGAATTCCATGACGTAAGAGTGTTTG
TGACGTCAAATTTAAAGAACAGTAAATAAACAATACATTCGAGTTTTGTT
TTAAGTTTTTATGTAGTCCTTGATTCTATTCTGTCATAAACTCTCAGTTC
TAGAAGCCTTTGACAGTGATTACAACAATAATAAGTAACAACTAACAAGT
GTTAATCTAGAAAATTTGTATGAATATTATCTAGACCTTTATTATTGAAT
AAAATGGGATCAGAAGAGCGGCTCTGCCTTCGGTGGGATGATTTTGAATT
GAATTTTAAAAACGGATTCTCGCAACRCCGCCATGATGAAGAGCTATTCG
ACATCKCTCTCGCCACTGCTTCCAATCAAATCAAGGCTCACAAAGTAATT
TTGTCATCCTGTTCTCCTTTCTTCCGTTCGCTCATCATGTCTCTTTCGTC
GCATCAACATCCTCTCCTCTACCTCAGCGGAATCAACTTTAAACATTTGG
AGTCTCTTATGTCGTTTATGTATAAGGGAGAGGTTCATGTTGGTCAAGAA
GAGCTGGATGATTTCCTTAAGGTAGCTCAAGAACTTAAAATAAAGGGCTT
ATGCGCTTCAACTCCGGATAAAATGGATCGGATTAATGCTGTGTCACCCT
TGCCTAAGCATAAAAAAACCTCTACTCATTCCTCATCAGGGGTAGAGTCT
ATCATCTTGAAAAAAGAAACATCTATTCCTTCTAAAACTCTCGTTGAAGA
TAACGAGATAGAAATTTTAAGTGATGTCGACCAGGATATTCAACCTACCG
ACAATGAAATGCAGTCTATTGAAGATTCTGTTAATATAATTAATCATGAT
GAAGGCCTTTCCAGTTCATTTGAGTGTGAAGATAACAAGGATTTCATTAC
CTATCAAGATCATGAATCCATGAAAGATTCAAATTTCCTAATGATACCAG
GAGTATCAGATGCTAGATCTTCCTTGGATGACAATGAAGGTGGGTTGAAC
AATCTGTTAACTATATCCATGAATATCAATCCATTATTTTCTTTTTTCAT
TCCAGAATACGTACGTGCTCTAAATCTTGAGATATCTAAATTTGTTGTAG
ATAAAGATATGAATGGTAATTTTCGATGTAAACGATGCAGCTATGTAAGT
CCACGAAGAGACACAATTAGAGCACATATAGAGGCGATACATTTCATCAC
TAGTGGTTTCAAGTGTAACATATGTCAAAGAACATTTAAAACACGGCAGT
CTCTTAAAACTCATAAATTAAAATATCATAAACCAGGGCCTGTCCTTTTC
CGAAAAGAACAATTTAATTGGTAGGGATATTCTATTTAATTTAGAATTCC
ATTTCACATCTTCATTTTTATATTATAATCCTCAAACGATCTAACATTTT
ACTATAAATTATTTTAGTACTTATCCTATATAGAATGGCAAACTTTATGA
CGTGCTCTCTTTATTTTAACTTTATTTGATTGCCATTATTGTATAATTAA
TTATTTTTCACTTCT
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