EMLSAT00000012537, EMLSAT00000012537-708384 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012537
Unique NameEMLSAT00000012537-708384
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s923supercontigLSalAtl2s923:137682..138537 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012537 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012537EMLSAG00000012537-695303Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056336EMLSAE00000056336-765264Lepeophtheirus salmonisexon
EMLSAE00000056337EMLSAE00000056337-765265Lepeophtheirus salmonisexon
EMLSAE00000056338EMLSAE00000056338-765266Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773045auto773045Lepeophtheirus salmonispolypeptide
EMLSAP00000012537EMLSAP00000012537Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012537

>EMLSAP00000012537 ID=EMLSAP00000012537|Name=EMLSAP00000012537|organism=Lepeophtheirus salmonis|type=polypeptide|length=244bp
MTNNISYEVIDTPSQLPGWLGAAFGSSLVGLAGMLPXXFXSDVKTRPLMY
RFLLSFAVGGLLGDTFLQILPESYSRCGNNQSQVGLGILLGLFVCLFIET
FSHSPQGSGYSNLLANSVDNLNHGLSIGSAFSVSTKVGILTTVCILLHEI
PHEIGDFALLLESGFTSTQAAKAXFGXXAVGVCGAILALGADSIESLSLW
ILPFTAGGFLNIALVSSLPGXLASSKSKEDSVITAFGILSEMNP
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mRNA from alignment at LSalAtl2s923:137682..138537-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012537-708384 ID=EMLSAT00000012537-708384|Name=EMLSAT00000012537|organism=Lepeophtheirus salmonis|type=mRNA|length=856bp|location=Sequence derived from alignment at LSalAtl2s923:137682..138537- (Lepeophtheirus salmonis)
ATGACCAATAATATATCATACGAAGTCATCGATACTCCAAGTCAATTACC
AGGATGGCTTGGTGCAGCCTTTGGATCCAGTCTTGTTGGATTGGCTGGYA
TGCTTCCCRGTTTWTTTTTMTCTGATGTCAAAACACGTCCCCTAATGTAT
CGTTTTTTACTCAGTTTTGCCGTTGGCGGTCTTCTTGGAGATACTTTCCT
GCAAATATTACCAGAGTCTTATAGTCGTTGTGGAAATAACCAATCCCAAG
TTGGACTTGGAATACTTCTGGGTCTCTTTGTTTGTTTATTTATTGAAACT
TTCTCACATAGTCCACAAGGATCTGGGTACTCTAATCTGTTAGCAAATTC
TGTCGATAACTTAAATCATGGACTTTCTATTGGTAAATCCAACTCTTTTT
ATTTTAGTAATTAAAAAGGATTACTTTTACATATAGACTTTATTTTTAGG
AAGTGCATTCAGTGTTTCAACCAAGGTTGGAATATTGACAACTGTTTGCA
TACTCTTACACGAAATACCCCATGAAATAGGAGATTTTGCTCTACTTCTG
GAATCGGGATTTACTTCCACTCAAGCAGCAAAAGCACANTTTGGTKCASC
TGCCGTAGGTGTTTGTGGTGCAATATTAGCTCTTGGAGCAGATTCAATAG
AGAGTCTCTCTTTATGGATTTTACCCTTTACTGCAGGTGGTTTTTTAAAT
ATTGCATTAGTTTCGTCATTGCCTGGAATKCTCGCTTCATCTAAGTCAAA
AGAGGATTCAGTCATAACCGCCTTTGGGATTCTATCAGGTGTTTACATTA
TCTATATAATGTCTATGATATTGTGATGATCTATATATACAGAAATGAAC
CCTTAA
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