EMLSAT00000012547, EMLSAT00000012547-708394 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012547
Unique NameEMLSAT00000012547-708394
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s924supercontigLSalAtl2s924:36363..37898 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012547 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012547EMLSAG00000012547-695313Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056369EMLSAE00000056369-765297Lepeophtheirus salmonisexon
EMLSAE00000056370EMLSAE00000056370-765298Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770142auto770142Lepeophtheirus salmonispolypeptide
EMLSAP00000012547EMLSAP00000012547Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012547

>EMLSAP00000012547 ID=EMLSAP00000012547|Name=EMLSAP00000012547|organism=Lepeophtheirus salmonis|type=polypeptide|length=321bp
MGSTETLCLRWNEFESSIKHGFSVLRSDKDFFDVTLACGSHQIKAHKLIL
STCSAFFRTLIKSVPHQHPLLYLRGVDFNNLESVLCFMYSGEVRVNPEDL
DQFLSLAQELQVNGLMQDQSSSEVVKSEPTLFNEVKKIEPIFEPTAPKRS
LNASNIIKLKKEPSPISNPSKRISTELPDDEDSDIEVIPPSGSSTMMHVS
SQEELNDVPNEEDENDEMEPEYTEEESLMNASDSSHKMNELLDEELLKFV
SKRDEDKKFKCLKCSLTFRSKQVAKFHVEAKHFITDGFECDKCSRRCKTR
RSLTMHKFRVHKKDPEYFSTI
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mRNA from alignment at LSalAtl2s924:36363..37898+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012547-708394 ID=EMLSAT00000012547-708394|Name=EMLSAT00000012547|organism=Lepeophtheirus salmonis|type=mRNA|length=1536bp|location=Sequence derived from alignment at LSalAtl2s924:36363..37898+ (Lepeophtheirus salmonis)
CGGCTATTCATCCTTCAATCTATTATTTTCATATACATGAAATATCTTCA
ATTCTAAAAAAATATTGTTGGATAAATGATACATTATAAATAATGGAATC
ATTTTTTCATACTAGTGTTTGAAAATGTACTTAAATGTTTGGTATTTGTA
CGTCGTTCATGACTGAATGAGAGAAGAAAAGGTTTGGGCATGAGGCAAAA
GTAAACAGCACTCGCAGTTGAGTATTATTATGATAATGTTGTGAGTCTTC
CTTAGTTTATACTTTATATTCTGACTTTGCCTTTTAGTTTTACAATTCTC
GACTTATCCGATCTCTGAGAACGTTCATTATTGCTACGAGAATTCTTTGC
GATATCATCAATTGATAAAAAAGAAGAAAATGGGCTCAACCGAGACACTT
TGTCTTCGTTGGAACGAGTTTGAATCAAGTATAAAACATGGCTTTTCGGT
ACTACGAAGTGACAAGGATTTCTTTGACGTTACCTTGGCATGTGGATCCC
ATCAAATTAAGGCTCACAAATTAATACTAAGTACTTGTTCCGCCTTTTTT
CGAACCTTGATCAAATCCGTGCCTCATCAGCATCCTCTTTTATATCTACG
TGGAGTAGATTTCAATAATTTAGAATCAGTACTTTGTTTTATGTACAGTG
GAGAAGTGCGTGTGAATCCTGAGGATTTAGATCAATTCTTATCTCTTGCA
CAAGAACTCCAAGTTAACGGTTTAATGCAAGATCAATCCTCGTCTGAAGT
AGTAAAGTCTGAACCAACATTATTTAATGAAGTTAAAAAAATTGAGCCAA
TTTTCGAACCGACTGCTCCAAAAAGATCTTTGAATGCTTCAAATATTATT
AAATTAAAAAAGGAACCTTCTCCTATCTCCAATCCAAGTAAAAGGATTTC
TACTGAGCTGCCTGATGATGAAGATTCTGACATTGAGGTTATTCCGCCTT
CAGGATCAAGTACAATGATGCACGTTTCATCTCAGGAAGAATTAAATGAC
GTGCCTAATGAGGAAGATGAAAATGATGAAATGGAACCGGAATATACTGA
GGAAGAATCTTTAATGAATGCATCAGACTCATCCCATAAAATGAATGGTA
TTACTTACATACCATCAAATTCTTAATTCAATTCGTATTTCTTTGTTTCC
AAATAAACAACTAAAACTAAGGATAAAAAAACAAAAAAACACAACAACAT
TGCGTTATGTAAAATTATATTGATTCGCTCCCTTATTAAAATATTTATAA
CTTTTTTCAGAATTATTAGATGAAGAACTCCTCAAATTTGTTTCAAAGCG
CGATGAAGATAAGAAATTTAAGTGTCTCAAATGTTCTCTCACATTCAGAT
CCAAGCAAGTTGCAAAATTCCATGTAGAGGCAAAACATTTTATTACGGAT
GGTTTTGAATGCGATAAATGTTCTCGGAGGTGTAAAACAAGACGTTCACT
GACCATGCACAAATTTCGAGTCCACAAAAAAGATCCTGAATATTTCTCAA
CAATATAAAGAAGATTTTTAGCTATTTATTAAATTT
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