EMLSAT00000012577, EMLSAT00000012577-708424 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012577
Unique NameEMLSAT00000012577-708424
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s937supercontigLSalAtl2s937:136997..140196 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012577 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012577EMLSAG00000012577-695343Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056485EMLSAE00000056485-765413Lepeophtheirus salmonisexon
EMLSAE00000056486EMLSAE00000056486-765414Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773039auto773039Lepeophtheirus salmonispolypeptide
EMLSAP00000012577EMLSAP00000012577Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012577

>EMLSAP00000012577 ID=EMLSAP00000012577|Name=EMLSAP00000012577|organism=Lepeophtheirus salmonis|type=polypeptide|length=167bp
MAPKGPKLLGPEVHATXHPLLYNLSSMDRSQVLLKYSFLALSAILAVAFS
APSHPYRPAPYHPAPAPYHPAPSPAPAAYQYQYAVSDEYAGLNFGADEAR
DGYSTNGKYSVALPDGRIQTVSYNVADAYSGYVADVTYSGEPQYAPYKSA
PAYKPAPVYRPAPVYHV
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mRNA from alignment at LSalAtl2s937:136997..140196+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012577-708424 ID=EMLSAT00000012577-708424|Name=EMLSAT00000012577|organism=Lepeophtheirus salmonis|type=mRNA|length=3200bp|location=Sequence derived from alignment at LSalAtl2s937:136997..140196+ (Lepeophtheirus salmonis)
ATGGCTCCGAAAGGGCCAAAGCTTCTTGGACCTGAAGTTCATGCTACCKC CCATCCACTCTTGTACAATCTTAGCAGTATGGACCGTAGCCAAGTCCTAC TGAAATACGTACGTGGCATTGTTGGACTTATTCATGGTCGTAGTGATCTA TGGAACCACATTTTCCTTGAACACCATCAAGTAGCCCGCGGGTGGGTTAC CCGTATCCAATAGGAAACCAAATTGGAGGCATTTTTTCTTCAGTTGATGC CACAACCCTAACATCATCAATCGAGCGGTGTTTGGTCTTTGTTTCTGTCC TGATGCTGTTATCAGCCTTCCCGAAGCATAGCACTCTATCATTTTGCTTG TTGTAGAAGGGGTCAATGATAAAGGTCATTTAGTCAGAGAAAAAAATTAC CTGGTTGCTGTTGTGCTGCAGATCATTCAAGAATGGTTGYCGAAGMTCTT TTTMACATTGGGACCGGAGMAGTCTCTGAAGCAACCTTCCTCCAGCCTTT TGGATGGCCTTGCCCACAGTAGACCGATGTACCTTCTGCTCTTTGGTTAA TTCTGATATCTTCATCTTTGTGTTTGACCTTAAATGCATCCATAACGTCT TCAGGCTTCACTTTGGTGGGTCTTCCACACTTTCGTTTTTCTTTAAGGTT ATTCACATCAGCCAAACGATTTCTGATCCGACAGACTGTGGTCTTACTGT CGTTTAAGGCCTACGTTATGTCGAAGGTGATCCTCCTGGATTAAATTGCG TATAATGGCTCTTCTTGCCTCCATCATGACATATACAGAATTTGTGTTTA CAAAATGTACATTGCACATCAATCAAAGGCTTAGAATCCAAGCTTATCAA CAATAATGGGAACTTTAAGATTTAATAGACAATACCTTTTTAAAACTGTA TTTTTAGAAGGTCTCATTACTTATTTCTACAACCGGTATGTTAATTCTTT ATTAGATCATCGAGCTGGAACATCTTCCTCATAAAGAAAAAAATTATAGA ATGATCACCTAACTTAGTCGTTAATAATTGTAAAAATGTGTATTTAAAAT ATTAATATTCAGGTATTTATTAATATAATTATACTTCTCTACACTTTTTT TATAGAATATAAGTGATCGAATAGAATCGAAGTGACATGTTTGTGTCCAG TTTTTTATGTTAAAGTGCGAGTTCTACGCCAAGTCTTCCAAATGTCCTCC TTATAATCAAAACTGAATACATAGTATACCGATTACTAAACAAAGTTTTC ACCCACTTTATATTATGGATTTTTTTGGTACTTAATATCAAACTTTATTA GAAGACAATTCCTAATTAGACATATCGTAATAATAATATAAAACTCAGAC TTTCATCAATAATAAAAAAGCCCTTATTCCCTCAAAAACGTGCTTCAGCT AGAGTAGAAATAACGAACGAATCTAAGTAAATTAGCTTGGTTCAAGTTTT GTCATTTCTCATTTATTCATTTGCAGAGGACACTTAAATTCTGTCCACGA TTAATACTCTCCTGGATTCAATTTGCTTCAATATGATGCAATCAAGGGAA TTGTGAGCAGGCAAGGATGGAGGCAAGAAAAGCAACATAAATCCAAAAAT GTCTCGGGGGTTTAAGTAGTATTTATATTGTGTACCTGCGAATTGCAAAT TATTTAGTCAGTGATTGAAACCTTTCCAAAGTTTGATTCACAATTTTCTA GGATGTGCTGTATATTATAGCAGTTGTCTCCTCCCATAAGACGTATCTTT ATTCGAATTGCATACCAATGATGGAGATCAGTATAATTCCTACCAAATTT TGCACACCTTGACATTGGAGCACAATATGCCTGAAGTCTTATTACAGATG TGATATCATATCTTGAAAATGCGTCCAGATATAACAATATCTTTTTTATA AATACAGAATATTAACAGCTGAATATTTATTAAGTACAGACCTTATTGAG TTCAATTCATAATATCTCTTAAAATCATTATGAAAAAGTTTGCAATAATT CAATTAACAGCCGCCACATTCTACACAAATCATTTTATTTTCCTCCATTT CACCAACTTGAGTCATAGATCCTTCATTTTATACATGTTACTTTAATACC TTACAGTTTGTAGTGTATAACCTGTATGTAGACACATTTTTCGATTGTAA TTATTCTGAAATAAACATATTAAACAATATTCGTTGTAGGTAATGAGTTT TTTATTTAAATTTAAATAAATGTCAAACATAACATTTTCAGCCCTTATTT TACTCTTATACATACATAAAAAGAATACAGGACTCATTTGGGGGAAGAAA GAATACAATTTTTAAACTTGGGGTCTAGAGTTCCACAGATTAATATACAA AATAATTTGACCTAGCACTTTAAATTTTCAAATGAAGTTTCTAAAAATAT AAGTATAAAATGTTAGTATTTTTAAAAATATGTATGTAAAGACGGAAGGA AACAATGAAGTGCAGGGATGAACTTACGTAGAGGAATGCGTAGCTGCGTC AACGCCCATTTTTTATGAATAGTGCAGCAATGAACAATTATGTACTGAAT TTGTCTTTAGATGATATCACCTACTATAAAAGGTTTAAAGAACTTGTGTA ATTGTATCAGTTGTAATCCTCCAATATTCAACTCAACAACATGAAGGTCA CAACACTCTAAATAAAAAGCTAATTTGACTTTTTAATTTTCTTTTTCCTT TACAGTCCTTCCTTGCTTTATCCGCCATCTTGGCTGTTGCATTCTCTGCA CCTTCCCATCCCTACAGACCCGCTCCCTACCATCCAGCCCCTGCTCCATA CCACCCTGCTCCTTCTCCCGCCCCAGCTGCTTATCAATACCAATATGCTG TCAGTGATGAATATGCTGGACTCAACTTTGGAGCTGATGAGGCCCGTGAT GGATACTCCACCAACGGAAAGTACTCAGTTGCCCTTCCTGACGGTCGTAT CCAAACCGTGTCCTACAATGTTGCTGATGCTTACTCTGGCTATGTTGCTG ACGTTACTTACTCTGGAGAACCCCAATACGCTCCTTATAAATCTGCTCCT GCCTACAAACCAGCTCCTGTCTACAGACCTGCCCCTGTCTATCACGTTTA AGGTTTAATATTGTCAATGTGTTATATCAACTAAGTCACTTATTACGTAT TTATTTATTTGAATAAACATATTTTAAAGAATGACGGTTTTGAATAGTCA
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