EMLSAT00000012715, EMLSAT00000012715-708562 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012715
Unique NameEMLSAT00000012715-708562
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s965supercontigLSalAtl2s965:433029..434186 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012715 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012715EMLSAG00000012715-695481Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057064EMLSAE00000057064-765992Lepeophtheirus salmonisexon
EMLSAE00000057065EMLSAE00000057065-765993Lepeophtheirus salmonisexon
EMLSAE00000057066EMLSAE00000057066-765994Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777634auto777634Lepeophtheirus salmonispolypeptide
EMLSAP00000012715EMLSAP00000012715Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012715

>EMLSAP00000012715 ID=EMLSAP00000012715|Name=EMLSAP00000012715|organism=Lepeophtheirus salmonis|type=polypeptide|length=140bp
MNSRNSVKRYKLVVVGDGACGKTSLLTVFKTGIFPKSQEFYDRLRILTYP
ADVIIICFAIDRPETLANVRKRWIPEVRQHCKGVPILLVGNKIDLRDDRM
VLSNLRKVQKAPVLFAETRSMAYSINATAFHECSAKLLDG
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mRNA from alignment at LSalAtl2s965:433029..434186-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012715-708562 ID=EMLSAT00000012715-708562|Name=EMLSAT00000012715|organism=Lepeophtheirus salmonis|type=mRNA|length=1158bp|location=Sequence derived from alignment at LSalAtl2s965:433029..434186- (Lepeophtheirus salmonis)
ATGAATTCAAGAAATTCTGTTAAACGCTATAAACTGGTGGTGGTCGGTGA
TGGAGCTTGTGGAAAAACGAGTTTGCTAACTGTCTTTAAAACAGGGATAT
TTCCAAAAAGTGAATACGTTCCGACTGTTTTTGAATCTGATATTGCTTAC
ATGAATGTTGATAATGTTGACATTGAGTTGTCTTTATGGGATACTGCAGG
TAATAATTAGACTAGGGCCTGTTCACATATTTTCTGTTCACCTGTTCTTT
TCTGAAAAATTTCAAATACCACGTAATCCATTTTTTTCCAAATGGAATTG
GCTACGAAAAAACTTTTTTCCTAGCTAGATGTCAATTTTTAGGTACTGCA
TAGGACGTCACTTTATCATTTTCCTAAGTGATATATAAATTTTTTTCTTT
CCTTTTCAGAATTTACGTATCTGAATTTATGAAGGTTACTTAGTTATTTA
TAAAGTAATTCATGATACCTTCAGTATCCCCAAGCAGAAAAAAATATTGT
TGTAGCCGACTAAATTTGAACAAAATATGAACTCGTTGTAGTCGTTTTGC
TTCTTGGTTAAGCTTTGGTAATTGATTAAAAATATGTGTATGGAAAAAAA
TAGAAAATATGTAAAGAAATGAACGCTATTCCAAGATTTTTCCTCTAATC
TTTCAATTTTTTGTCCGTTCAGGCGCTCAAAAATAACGGAAAGCATGAAC
AGCGTTCATTTTCTACTTAATATTCAGTCTTAAATATGATAGTAAACTGC
AGATCCTTACTAATAATGTATCTTCTTTCTTATGTTATCAAGGTCAAGAA
TTTTATGATCGACTTCGTATATTAACATATCCTGCTGATGTAATCATCAT
TTGTTTTGCAATTGATCGTCCAGGTAACTACATTTTTATTATTAACACTA
AACTATTATAGTTATTATTAAAATTTAGAGACTTTAGCTAATGTACGGAA
ACGATGGATACCAGAGGTGAGACAGCATTGCAAAGGAGTACCCATACTTC
TGGTGGGAAATAAGATTGATCTCAGGGATGATCGCATGGTTTTATCTAAT
TTGAGAAAAGTTCAAAAAGCTCCAGTATTATTTGCTGAGACTAGATCAAT
GGCTTATAGCATCAACGCAACAGCATTTCATGAGTGTTCAGCAAAACTAT
TGGATGGT
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