EMLSAT00000012727, EMLSAT00000012727-708574 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012727
Unique NameEMLSAT00000012727-708574
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s967supercontigLSalAtl2s967:120685..121866 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012727 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012727EMLSAG00000012727-695493Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057136EMLSAE00000057136-766064Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772672auto772672Lepeophtheirus salmonispolypeptide
EMLSAP00000012727EMLSAP00000012727Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012727

>EMLSAP00000012727 ID=EMLSAP00000012727|Name=EMLSAP00000012727|organism=Lepeophtheirus salmonis|type=polypeptide|length=393bp
MNFLGYTVFLLFLLLSYLFISWCTFWLVTSKAEDSKDIYNSGSTLPINSN
DTKSKLVVKDSEEVSEEMRRIKAFEKKXISNMNKTVMDNGKKILAGKFEN
KFKVNFNGGRVGALLDISQTPSELLCDMKKKVKLHIFKKGDPFFRTKQLD
QFFRSXPFLSNKTYNSCAVVTNSGSLINSGLGTFIXSHDLIIRFNDGPTS
GFEKDVGSKTSLRVVNSQIIFXPEFGFLGSKSLYSSSAVLVWDPTNYTAS
VSEWYSHPDQPFFENFFAKRRMKPEEPLYLLHPGSLWSIWDWLXXHSKWP
MVPHPTTSGFLGLAIAIQHCRIVRSFEYIPSLRYGNRCHYYGTQIYPGDP
CTYGAWHPVSTEKLMGLALNIGKKKEIYSDGFLTIPGFAGLNC
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mRNA from alignment at LSalAtl2s967:120685..121866-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012727-708574 ID=EMLSAT00000012727-708574|Name=EMLSAT00000012727|organism=Lepeophtheirus salmonis|type=mRNA|length=1182bp|location=Sequence derived from alignment at LSalAtl2s967:120685..121866- (Lepeophtheirus salmonis)
ATGAATTTCCTTGGATATACTGTATTTCTCTTGTTCTTACTCTTAAGCTA
TCTCTTCATTAGCTGGTGTACGTTTTGGCTAGTGACCTCCAAAGCAGAGG
ATTCTAAGGACATTTACAATTCAGGATCCACTCTTCCAATAAATTCTAAT
GATACAAAAAGTAAACTTGTAGTGAAGGATAGTGAAGAAGTGTCTGAGGA
AATGAGGCGGATCAAAGCCTTTGAAAAGAAAYTTATCTCCAATATGAATA
AAACCGTTATGGATAATGGAAAGAAGATCCTTGCTGGAAAATTTGAAAAT
AAATTTAAAGTCAACTTCAATGGTGGTCGGGTGGGAGCATTGCTAGACAT
CAGCCAGACCCCATCAGAGCTTCTCTGTGATATGAAAAAAAAAGTCAAGT
TGCATATCTTTAAAAAAGGTGATCCTTTTTTTAGAACTAAGCAATTAGAT
CAATTCTTCAGGTCCASTCCTTTTCTTAGTAACAAAACATACAACAGCTG
TGCTGTAGTGACAAATTCTGGTTCTTTGATTAACTCTGGACTTGGAACCT
TCATTGKCAGCCATGATTTAATAATACGCTTTAACGATGGTCCTACATCT
GGATTCGAAAAAGACGTAGGTTCGAAAACTTCTCTTCGTGTTGTAAATAG
CCAAATTATATTTAAMCCCGAATTCGGGTTTCTGGGTTCTAAAAGCCTAT
ATTCCTCCTCTGCAGTACTCGTTTGGGACCCAACTAATTATACGGCTAGT
GTTTCAGAGTGGTACTCACATCCAGATCAGCCTTTTTTTGAGAATTTTTT
TGCAAAGCGACGCATGAAACCAGAAGAACCTTTGTATCTTTTACATCCAG
GAAGTCTATGGTCCATTTGGGACTGGCTAKAAWCTCATTCAAAATGGCCG
ATGGTTCCACATCCAACGACTTCTGGCTTTTTGGGATTAGCTATTGCAAT
CCAACATTGCAGAATTGTTAGGAGTTTTGAATATATTCCATCGCTTCGCT
ATGGTAATAGATGCCATTACTATGGAACTCAAATATATCCTGGTGACCCA
TGTACCTACGGAGCCTGGCATCCTGTTTCTACTGAAAAGTTAATGGGGTT
GGCTCTCAACATTGGAAAAAAGAAAGAAATTTACTCAGATGGATTTTTAA
CCATTCCAGGATTCGCAGGGCTTAATTGTTAA
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