EMLSAT00000012735, EMLSAT00000012735-708582 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012735
Unique NameEMLSAT00000012735-708582
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s967supercontigLSalAtl2s967:76673..79801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012735 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012735EMLSAG00000012735-695501Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057164EMLSAE00000057164-766092Lepeophtheirus salmonisexon
EMLSAE00000057165EMLSAE00000057165-766093Lepeophtheirus salmonisexon
EMLSAE00000057166EMLSAE00000057166-766094Lepeophtheirus salmonisexon
EMLSAE00000057167EMLSAE00000057167-766095Lepeophtheirus salmonisexon
EMLSAE00000057168EMLSAE00000057168-766096Lepeophtheirus salmonisexon
EMLSAE00000057169EMLSAE00000057169-766097Lepeophtheirus salmonisexon
EMLSAE00000057170EMLSAE00000057170-766098Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771497auto771497Lepeophtheirus salmonispolypeptide
EMLSAP00000012735EMLSAP00000012735Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012735

>EMLSAP00000012735 ID=EMLSAP00000012735|Name=EMLSAP00000012735|organism=Lepeophtheirus salmonis|type=polypeptide|length=680bp
MIRRRNVALFFCLSIFILDSRGNAQISFGDQATNSNQNLFNILNKSSVSI
STRNSLNTPSTRNSGSRCITPRGEPGVCSFISDFRCGEVLSAIQRVGITQ
QVINYLRRAIQPPCGFDRTDYTLCCKDSSVLPPPGPTPTSPTTTTTTTTT
TTETQQPSSNICGITGFNTRVTGGKVSLPGVWPWAVILGQISNGNIEVIC
GGTLISDRHVLTAAXCFXGQRAITIARLGEHDITSDSDGATPQDIGVAQV
SAHEGYNGVDLKNDIAIVTLSQSAVFTQRVRPACLPMPNDILPTNEAVIV
GWGATSTRGPTVDKLREATVPLISASECDQFYSGIERITIDGRQICGRPG
PRDSCSGDSGGPILLNYIFQSFYEFKSKCGMLNIAKLIIVSFLFRIERTS
SHSKDNTIDLLESVTVPFYDSSNVYPVKGYQGRKAFGFQAGSNIMIPLHL
IYDKEYLENFWIQTVFKPSDDQGGYLFAILNSFERGIKLGIEILPTLEKT
QSLHVHINGDQDQDPIYITLRHLKPQWNFLDFKFVNGNLTVEHNCVLVSK
NKLKLGREKILLDRSSTLYLAQAGSKLHGEFEGIIQEMKIVLGENQRNHC
IMNGSLEVIGENGIKKKIDDMYTLKGTKGNKGDPGAPGTTGANGKKGPVG
PPGPSGKDGSRGPPGLPGLPSISPLNGSND
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mRNA from alignment at LSalAtl2s967:76673..79801-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012735-708582 ID=EMLSAT00000012735-708582|Name=EMLSAT00000012735|organism=Lepeophtheirus salmonis|type=mRNA|length=3129bp|location=Sequence derived from alignment at LSalAtl2s967:76673..79801- (Lepeophtheirus salmonis)
ATGATTAGGAGGAGGAACGTAGCCTTGTTTTTTTGTTTGTCTATATTTAT TCTCGATTCGAGAGGGAATGCCCAAATCTCTTTTGGGGATCAAGCTACGA ACTCAAATCAAAACCTTTTTAATATTCTAAATAAAAGTAGTGTTTCAATT TCTACTCGAAATTCTTTAAATACTCCAAGTACACGGAATTCAGGAAGTCG TTGTATAACTCCGAGAGGAGAGCCTGGAGTTTGTAGCTTTATCTCGGATT TCCGATGTGGAGAAGTTCTTAGTGCAATTCAACGAGTTGGAATCACTCAA CAAGTCATCAATTACCTTCGACGGGCCATACAGCCCCCTTGTGGATTTGA TCGTACTGATTACACTCTTTGCTGTAAAGATTCAAGTGTACTACCTCCTC CAGGGCCTACMCCCACAAGYCCAACGACAACCACAACGACAACAACCACA ACGACGGAAACTCAACAGCCCTCTTCAAATATTTGTGGAATCACTGGGTT CAACACTCGAGTAACCGGGGGTAAAGTATCTTTACCAGGAGTTTGGCCAT GGGCAGTCATTTTGGGACAAATAAGTAATGGAAATATTGAAGTGATTTGT GGTGGAACTCTCATCTCGGATCGGCATGTACTAACAGCGGCTCMTTGTTT TWGGGGTCAAAGAGCCATTACTATTGCTCGATTAGGGGAACATGACATTA CTTCAGATTCTGATGGAGCAACGCCTCAGGATATTGGAGTGGCTCAAGTA AGTGCCCATGAGGGTTATAACGGCGTTGACCTCAAAAATGATATAGCAAT AGTCACACTCTCTCAAAGTGCAGTGTTTACACAAAGAGTACGCCCTGCTT GTCTTCCAATGCCAAATGATATCCTTCCAACAAATGAAGCTGTTATTGTG GGATGGGGAGCAACAAGTACTAGAGGACCTACTGTGGACAAATTAAGAGA GGCAACAGTTCCTCTTATATCTGCTAGTGAGTGTGATCAATTTTATAGTG GAATAGAACGGATCACTATTGATGGAAGACAAATATGCGGAAGACCGGGG CCAAGAGATTCCTGTTCTGGTGATTCTGGAGGACCAATGTTGAGTGATAA AATTTCAAGTAGATGGACAGTTATAGGAGTCACCTCCTTTGGTGTTGAAT GCGCAAGAAATGATTTCCCTGGTGTCTATACGAGCGTTCAATCTTATCTA CCATGGATTAATCAAAGAATTTGAGAGTTCCATAGAATTTGATTATTTCA TCAATGATGACAAGTCGATAATCGGATAATTTGTATACATTTGATAACAC AAATAAAGTATTAAGATTTTTACAGTCTTTAAGCGATGATCAAATTAAGA GGTTTTGTGAGTTGTCTATAAGAAAGTTTCGAAGCATGCATGAGTCTGCT AACAGATTGAAACATATTTTTACATTTATTTGATCTTAAATTTATAATTA TATCTAGGTATTGTAACTAATATGTAAAATAAAATTTAATTAAAGTTAAC CGTGTTAATTATTTTCTTGTTTGTACATTGAACATCCATCCATAGCCTTA TACATTCTTGCTTTTCCATGGCTAAATTTCGGAGAAAAATCATCAAATGA TGTTGAGCTGAAGGATGGTAATGCTGTAGGTGTGACTTTCTATATCATCA TTCATATATTGAATCTAGAGAGATTTATACAATATGAGGTAGGGGAGAGA AAAACCATGAGTGCTTTCTTTGGCATTGGCTACATAAAGTCTATTAAATT ATATTTTTCAGTCATTTTATGAATTCAAATCAAAGTGCGGCATGCTTAAT ATAGCTAAATTGATCATTGTGAGCTTCCTATTTAGGATCGAGAGTAAGTC ATGAGCATAATGTTGCAAATGAAAGAGATTCAAAAACATTATTTCTCTTT ACCTAGGAACGTCAAGTCACTCCAAGGATAATACCATAGATCTTTTAGAA TCCGTTACAGTTCCTTTTTATGATTCTTCCAATGTTTACCCAGTTAAAGG CTATCAAGGAAGAAAGGCATTCGGATTTCAAGCTGGCTCTAATATCATGA TACCACTTCATTTAATATATGATAAAGAGTATTTGGAGAATTTTTGGATT CAAACCGTATTTAAGCCCTCTGATGATCAGGTTTGAACTATTTATGGGGA AGCATATCATACCAATACATTTATTTGTAATTTATTAATAGGGTGGATAC CTTTTTGCCATATTGAATTCCTTTGAAAGGGGTATCAAATTGGGTATAGA AATCCTTCCTACTCTAGAGAAAACCCAATCCCTTCATGTTCATATTAATG GTGATCAAGACCAGGATCCTATTTATATTACTCTGAGACATCTTAAGCCT CAGTGGAACTTTTTGGACTTTAAAGTAATTAAATCGGGGCTTTTTACCCT ATAAATATAATTTTTGGGAGTACGTAACATTATTAATTATTTTCAAGTTT GTTAATGGAAATCTCACTGTAGAACACAATTGCGTTCTTGTCTCTAAAAA TAAGTTGAAGTTAGGAAGAGAAAAGATACTGTTAGATCGATCATCCACGC TTTACTTGGCACAAGCCGGATCTAAACTCCATGGAGAATTCGAGGTTTAC ATCTATAATCCATATGTATATTATAAAAATTTTATGTATTTATTTATATT TTCTATTATTTTAGGGTATAATTCAGGAAATGAAAATCGTATTGGGAGAG AATCAGAGGAATCATTGTATCATGAATGGTAGTTTGGAGGTCATTGGAGA GAATGGTATTAAAAAGAAAATTGACGTATGTAGTAGTTACATCCCTTATT AAACTATTGTAATGTATGTATAATATGATACAATTTCCCTTGTGTGGAAT AAATGGGTCACATCACTCATGACTGTTAAATGTTTTCTTTTCTATCCCTC CCCCCTGGATGACCTTAATTTATTAATGCGTTACTCTTTTACACAGGATA TGTATACTCTTAAAGGAACCAAGGGAAATAAAGGGGATCCTGGGGCTCCT GGTACCACGGGTGCGAATGGTAAAAAAGGTCCAGTAGGTCCGCCAGGGCC ATCTGGTAAAGATGGATCCCGAGGTCCTCCTGGATTACCCGGTCTTCCAT CAATCTCTCCACTTAATGGATCAAACGAT
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