EMLSAT00000012752, EMLSAT00000012752-708599 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012752
Unique NameEMLSAT00000012752-708599
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s968supercontigLSalAtl2s968:231997..233606 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012752 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012752EMLSAG00000012752-695518Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057248EMLSAE00000057248-766176Lepeophtheirus salmonisexon
EMLSAE00000057249EMLSAE00000057249-766177Lepeophtheirus salmonisexon
EMLSAE00000057250EMLSAE00000057250-766178Lepeophtheirus salmonisexon
EMLSAE00000057251EMLSAE00000057251-766179Lepeophtheirus salmonisexon
EMLSAE00000057252EMLSAE00000057252-766180Lepeophtheirus salmonisexon
EMLSAE00000057253EMLSAE00000057253-766181Lepeophtheirus salmonisexon
EMLSAE00000057254EMLSAE00000057254-766182Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774978auto774978Lepeophtheirus salmonispolypeptide
EMLSAP00000012752EMLSAP00000012752Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012752

>EMLSAP00000012752 ID=EMLSAP00000012752|Name=EMLSAP00000012752|organism=Lepeophtheirus salmonis|type=polypeptide|length=335bp
MCICLIGQYIHSSWKEEKKWTKLSVSQSNTQQSTEASTDYSSIRIVCIVF
TKIVNHNTRAKAIKETWGKRCKALIFISNSTVHLSDVSVFNINRTDDYNL
IWGKTKAGFKHAFELFKDEADFFMKTDDDSFVVIENLQKMLVDKNVKPTD
PIWFGNHFRLFTELGYMAGGGKTIHDSNLCHILHVKIRESARRFVKLGLE
IKDQNQCRTASDNGFEDLEMGRCLGSLGVVPGDSRDEYGRARMFCFNAET
VLNTWLPEKSFWYWKYIKHPQYFGHPGCCSDRTVSYHYVTTKNIYLYDYL
MYSAFVRGENNQKRTPPLPETLIQNINVDWKAIRG
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mRNA from alignment at LSalAtl2s968:231997..233606-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012752-708599 ID=EMLSAT00000012752-708599|Name=EMLSAT00000012752|organism=Lepeophtheirus salmonis|type=mRNA|length=1610bp|location=Sequence derived from alignment at LSalAtl2s968:231997..233606- (Lepeophtheirus salmonis)
GACTTATGTGCATTTGTCTCATTGGCCAGTACATCCACAGTTCATGGAAA GAAGAGAAAAAATGGACAAAACTAAGTGGTATGTTTTTATGAAGATTACT TCATTATATATTATTTAATAAAATCAGGACAAATTAAAAGCAGTGTAATA CTCCTGGACCACATTTTTTTATTGTTCTCCGTAATTTTAATTTTAAGTAC ATATTTGTATCTCCTCTAGTTTCTCAGTCTAATACCCAACAAAGTACTGA AGCAAGTACAGATTATTCATCTATTAGGATTGTATGCATTGTTTTTACTA AAATAGTAAATCATAATACCAGAGCCAAGGCCATCAAGGAGACTTGGGGC AAAAGATGCAAGGCGCTCATTTTTATTTCAAACTCCACAGTTCATCGTAG GTATCCGACACTGCATTATAGCCATTTAATCTTACTTATAATCCTAGTTT CGGATGTAAGTGTATTCAATATTAATCGAACAGATGACTACAACTTAATT TGGGGTAAAACGAAAGCGGGATTCAAGCATGCCTTTGAGCTATTCAAGTA AGACCTAATCTAGCTGGTATCCTATTAATAATATTGATAGTTATGGTCAT AAATATCCTATGCATTTAAAAATTTGTTTGTAGTAGGATTAACTGATTCT TTATAAGGGGATTATTAGAGGTGTCCCAAGATTATGGAACTAATTTTTTT TGATAAATAGGGATGAAGCAGATTTTTTCATGAAAACAGATGATGATAGC TTTGTAGTCATTGAAAATCTTCAAAAAATGCTCGTAGACAAGAATGTGAA ACCCACGGATCCAATATGGTTTGGAAACCACTTTCGTCTATTTACTGAGC TGGGGTATATGGCAGGAGGAGGMAAAACTATTCATGATTCTAATTTATGT CATATATTACATGTGAAAATGTAATACTTATTTAAGGGTACGTTCTTAGT CGAGAATCTGCACGAAGATTTGTAAAATTAGGGCTCGAAATAAAAGATCA AAATCAATGTAGAACGGCCAGCGATAATGGATTTGAAGATCTTGAAATGG GAAGGTGTCTTGGTTCTCTTGGAGTTGTTCCGGGTGAGCTTAAAAGAAAT GAATGTTAATCTCACAACGTCCTCAGCGAAAAATGAATTAATACATAATA TGTATTTAAGTTTTCTCTGAACTTATGATATTTTTAAATAATAGGCGATT CAAGGGACGAATATGGACGTGCTAGAATGTTTTGTTTCAATGCAGAAACA GTCTTAAATACATGGCTTCCCGAAAAAAGTTTTTGGTACTGGAAATACAT TAAACATCCACAATATTTTGTAAGTAGAGATGCAAGGTACTAAGTAAGTT CTTTTTAACTTACGATTCGTTATTTATCAGAAACTTTTATATCCATACTC ATGTAAAAATTTTAAATATTTCAGGGACATCCGGGATGTTGCTCCGATAG AACAGTGAGCTATCATTATGTAACAACTAAGAACATTTACCTTTATGACT ATTTAATGTACTCCGCATTTGTCCGGGGCGAAAACAATCAAAAGAGAACT CCACCGCTTCCGGAAACTTTGATTCAAAATATAAATGTGGATTGGAAGGC AATTAGAGGA
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