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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s96 | supercontig | LSalAtl2s96:719242..725893 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012782 >EMLSAP00000012782 ID=EMLSAP00000012782|Name=EMLSAP00000012782|organism=Lepeophtheirus salmonis|type=polypeptide|length=782bp
MMNSSNTSSNEYTFRFGDPVWAKMKGFSAWPGKIDMPPDGMKRPAMRKIM
HCVFFFGTHDFGWILDSDLKPYQEFKKALTSNKKSNSFLKAINEIEEFIA
NGGKSSVLPQDDEEEDTIDEEAEEKDAEFDALFNKKKTKVPKKRMSSLSS
KTDSSKKPRLKPSNGKKSNRSFDPSLEERDFSLPPLSNHTPKKSASXAVS
SFLDXPSALXRPASPSFDVTTSSQTLKEKDIQPSTLKFGFLGLGIMGAGI
VKNLLNSGHHVSVWNRTSEKCEEFVKVGALKALTPADVILDSDITFSCVS
DPQAAKDMVFGNCGVLTEISSTKAYVEMTGIDADTSQDIAEAICLKGGRY
LEAQVQGSKQQSNDGTLVILAAGDRTLFDDCQSXFQAMGKNSFYLGEVGT
ASKMNLVLQLMAGVTLAGLAXGMALADRAGLQQXDVLEVLELTGLSCPLI
IGKGKAIIEGGFPTNHPLQHMQKDLKLSLNMGDQLEQPLPLTASANEKVC
KVTKDQSDGSLKLNKFTGMKIKTVPNIVKRKRTNYRLRKIIIPKSPLMVL
NEIVGSVTYKFVESTVPSTINGMATLFTAQCTVEGRDYEASGPSKQMAKN
LCAESAIQALVFQKCKDPNNFMKVDKEGNLIKPYQMEDETPWAQLSSLAL
FKLFNDWQASGHEVPVELLRPPTDSEVKVPPSPTPPVVTKVNTTKRPPGG
SKKLPDNPTERHPVQLLNEIQGGVNYALVREKPTTPVIFVMSVTVDGVTF
EGEGKNKKDAKRNCALAALKKIYGIVYPVRDN back to topmRNA from alignment at LSalAtl2s96:719242..725893+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012782-708629 ID=EMLSAT00000012782-708629|Name=EMLSAT00000012782|organism=Lepeophtheirus salmonis|type=mRNA|length=6652bp|location=Sequence derived from alignment at LSalAtl2s96:719242..725893+ (Lepeophtheirus salmonis)
GCCGTTTTCTGTTTTCCTTTTTTTGGAGCGCTTTTTTAAGTTGTTGTGGT
TGTGGCCCCCATACAGTAGTGGGCAGCCAAGATGAGCCGAGTTATCAAGA
AGAAACAGAAAGGAAAGAGAAAAGAAAAAAAAGGAAAAGAAGACAAATTT
GGATATCTTCGGCGTCGTTTGTATTTAGCGTCTATAAAATCAAGAAGGAG
AGAGATTTCTGGAGTCCTTCCCTCATCCAGTGATTCTGAATTGTGACGGA
TTCATATTGAATTTTGAAGCTAGTGTCTGTGACAAAGAGAACAGGGGAAT
GTTGTTTACGAGTGGATGAGTTCGTTATTATTAGTATTATTGAGGTAAAA
GAAAAGAGTTCGGGGACGGGATCCCTCATTATTCTCTTGTTGTTGTCTAT
GTTCTTTATTCTTCTTCTTTTCCAGACCTCTAGTCTAAGTACGAGTATAA
GTCGTTGTCCGCCCGCCAAGAGAGGAGGAGAATCMCCGCCTGTCCAGACG
CAACATAGGATAAATAATCCAGGAGAGTCCCCCATGATGAATTCCTCCAA
CACGAGTAGTAACGAGGTAATGACGAATTAAATAATGCACGTTGAATAAC
TTAGAATGGATGATTCCAACTTCACAGTACGCCCAGTCCCTGCTGGGAGG
GAGAGAGGCGTCCTCMCTACGTCCTCCACCTTCTTGCTTGAAAATGAAGG
CAGCTACTCCAGTTTCCCCATTCCTCTCTCCATAACCGGGAGGTGGGGGA
GGGAACCTCCATTTTTATCCCCTTCATTTAACTATCAACACATTTCAGTC
TTATTTGACTCGCTATAAAGATCAAAGTCCAATGGTTTTTTTATTTTTTT
AAAGTGGGTTCATTTAACTCTCTCTTGAAGCTTTTCATTCAATTAAAAGA
GTATGTATGATGTACTATTTATTTGTATGAAAAATACAGATCTTAAAAAG
TTAGATGAGGGTTCGTACTGTGAGGTAAATTCGTCAGAATTCAGGAGTAA
ATATGTTTTTCCATCCCTGAATAATATTCCTTTCTTTTACACTTCTTCTT
CTAAAGGGAGAGAAAAAAAGTTCAAATCTCCTTGGGGTTTGTGTTCCATT
GATTCTCTGTTTGATTGAGGGAGTATAACCTTCGTATCGGTGTTCTTTTT
TTATCTTTCTTTTTTAATTTTTAGTATTCCATTGTCATTATAAGTCCCCT
GAATGATTCAATTTTGTAATAAATCAAAGAGGGAAAAAATGTATATATTT
TTGAAAAGTTATTATGATGGGTTCTGGAATTTATGCCGTTTGGATCCTGT
TCTCTTTTTTTTTATCCCACATTCCCTTTTTTTCCCCATAGTACACCTTC
CGGTTTGGTGATCCAGTATGGGCCAAAATGAAAGGTTTTTCTGCATGGCC
TGGAAAGATTGACATGCCACCCGATGGAATGAAGCGACCAGCTATGCGGA
AAATCATGCACTGTGTCTTTTTTTTTGGTACACATGACTTTGGATGGATC
CTTGATTCGGATCTCAAACCATATCAAGAGTTTAAGAAAGCGCTTACTTC
GAATAAAAAATCCAACAGTTTCCTCAAAGCCATAAATGAAATTGAAGAGT
TTATTGCTAATGGAGGTAAATCTTCCGTCCTTCCCCAAGATGATGAAGAA
GAAGATACCATTGACGAAGAGGCGGAAGAGAAAGATGCAGAATTTGACGC
ACTTTTTAATAAAAAGAAAACCAAAGTACCTAAAAAACGAATGTCGTCTC
TTTCCTCAAAGACGGATTCCTCTAAAAAACCTCGGCTTAAACCTAGTAAC
GGCAAAAAAAGTAACCGATCCTTTGACCCATCTTTAGAAGAACGAGATTT
CTCGCTTCCCCCTTTAAGCAATCATACTCCAAAGAAAAGTGCATCTSCAG
CCGTTTCTTCATTTCTAGATAGMCCTTCCGCACTTCAMCGGCCAGCCAGT
CCATCATTCGATGTCACAACCTCATCTCAAACCCTCAAAGAAAAAGATAT
TCAACCCTCTACACTTAAATTTGGTTTTCTAGGTCTTGGTATAATGGGAG
CAGGGATTGTTAAAAACCTTCTGAACTCTGGGCATCACGTTTCTGTGTGG
AATAGAACCTCTGAAAAATGTGAGGAGTTTGTTAAAGTAGGTGCATTAAA
GGCACTCACACCCGCAGATGTGATTTTGGACTCAGATATCACATTTTCCT
GTGTAAGTGACCCTCAAGCAGCCAAAGACATGGTCTTTGGGAATTGTGGC
GTACTGACCGAAATAAGTAGCACAAAGGCGTACGTAGAAATGACAGGGAT
TGACGCAGATACATCCCAAGATATCGCCGAAGCTATTTGCTTGAAAGGAG
GGCGCTACCTAGAAGCTCAAGTACAGGGTAGCAAGCAGCAATCCAATGAT
GGAACACTCGTCATCTTAGCCGCRGGGGATCGTACATTATTCGACGATTG
CCAGTCCTKTTTCCAAGCCATGGGCAAGAACTCTTTCTACCTAGGAGAAG
TTGGCACTGCCTCTAAAATGAATTTAGTTCTTCAGCTAATGGCTGGKGTT
ACCCTAGCTGGATTGGCTGRAGGAATGGCCCTAGCAGATAGAGCTGGCCT
TCAACAAARAGATGTGCTAGAAGTTCTTGAGCTCACTGGTCTCTCCTGTC
CCTTAATCATCGGTAAAGGAAAAGCCATCATTGAGGGGGGTTTCCCTACC
AATCATCCTCTACAACATATGCAAAAGGACTTGAAATTAAGTTTGAATAT
GGGTGATCAATTAGAACAACCTCTTCCCTTGACTGCATCAGCGAATGAAG
TATTTAAGCATGCAAAGAGGCTGGGTTATGGCGATCACGATACTTCAGCG
GKGTATATTAGGGCTAGATTTTAATATGTGTGTGTGTGAACTCTCTCTCT
TCAAAAGTACAATAATTATTTTTGTAATTTATCATGTGGAAGTACGAAAA
AGTGCGTGCGTATTGGGATGATTTAGATCCATTGTAGAATTATACATATA
TTGCAATACTCCTCCTCAGAGTGCCCTTGTTGCATTGAGAGCAATATCAT
CATTGTCCAACCATTCGTTCTGTTTTTTTTGTTTTTTTTTAAATACACAA
TTAAATTGCAAGTTGCTTTTTTAAAGATGATTATTATTATTATTATTATA
GAAGTGATAATTACCAACATTTTGTTCGAATGTGTATATTTGTATATGTT
TGTAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTCCCCTTTTTTTGAGCARGTGTGGGCAAT
TTTTGAGAATTAAAAAACAATCTCGTATGAATGTATTAAGTATTCCTTAC
ATAAATACTCGTCATGTGTTTCGGTCTGTAAATCCTGTGCCGCTCTAAGA
CTCTTAAAATTATCCTTTTTTTATATAGAAAAATATATATGTTATTTTTT
ATCATATTTTCCCCTGTCTACGGTTGAAAACCTCGATCTGGACTATGATG
TGACCCATCAACACTAAAGATAACTCGAATTATATTCTAATTCATCCTGT
AGAGGCGTTGCAAATTGAAGACTCGGAAATTCATTGTCATAATGAAATAA
TTACAAATTGATTGATTTTGTGTATTTGAAAGGTCCCAAATGAAGGCTCT
AAACCAAAGGGCATTAACTTTTTTATGTAAGGACCACTTTGGCGTTACTA
ATAGATATGAGGCCCACATGTCTTAATGATGAATCCTAACTTATGGTTGA
TTAAGAATACACAATTCATTTTGTTTTGAGGATTCCGCTAAACATGTTCA
AGGATTGCGGGATGACGAGCTCTACCCCAAGCTATGGTTAACATTCTTTT
TGCATGGTATCTCAACTCTATATTCTATATATATATAATGTAAAAAATAA
ATAGAGCATTTGTTATTGATTTTTGTTGAAGATTGTTTTTGTGCTGACGA
CCCACATAACGAAATATTTTTCACTAACTAATTTTTGATTGTATTCCTCA
TTCTTATAACAAAATCATGCTTGATGACATGTATGTTAGAGCTTATTAAA
TATGTCGTTTAGACTTGTAGTATGGATCTCAAAAGTGGAGATCATAAAAC
TTCTTCTTGGACTGCGAGAAATGGACGCTCCAGTTCCGAAGGACAAAATG
ATTAAGGGTTGTTACCTATACCACGATTTTTAAGAGACACTCCATTGCAC
AACTTTTTTTCAAATTTCTACCTGTCAGTTTCAAGACACTTTCTGTTCTA
AATTGAAATTGACCGGTTCTGGAATTTTCATGAAGTAAGAGCTGGTTTTA
TATTTATACAGGGTCGTCGATAGGATAAATATGGACTATTATAAACTTTA
TCAAAAAAATAAACTGAATGTAGAGCAATAATTGTTTTGTTTTTTAAATT
AAGTGTGAGACTAACTGGATTGAGAAAATAAAATAATATTTGTTCTCTCA
TATCAAATAAACAATCAATGTAAAGATGAACCCAATAAGGAAAATTATAC
AATGGTTACTCCAAGAACACAGTTCCATACAATCTCATGAAAGGATGTTT
GAAAAGTGCATAAGACAAGATGTTGTGACAAGAACGGTACCTTCATCTTT
GTTGCTGGCCTAAAATGATGGATCTGGTCAAAATATGTCACCCAGGTTCA
CAAATATTTAAAATGGTTAATCAGTTGGAATTTGAATAGAGGAAGAATTA
TAATTTTCTTCAGGTTATGTGATGAACTGGATCGTGTACAGATGTTCAAA
ATGATGTCTGGGTATTAGCTAGAGTGGGAGGGGATGGCTGCCTCTCACCT
GTCAGAAACAAAGTTTCTAGCCTTCGTCATGATCATGGGTACCATTGGNA
GCAATAGTGGATGKACTGGNAAATGCATACAAAAWGATTTTCTACTAAAG
ATGATCAAATATAATAAATTGTGTATTCATTTGCTCTACATGGTGTTTAA
AATAGTCCGGATTTATCTAATCGCGGCGCTGTATATAAAAAAGTTAACTT
CTGATCAAGGGAGGACACTCAGTCTTTCTTTCTTTTTGTTAACTGAGGGT
CCTTACAAAAATTGGAAATTAGTTGAAATTGGAGAATAGTCTCATGCATT
CGTCCGTATATGTATTTTCCCTCTATCTTATCTCCCCATTTTTCAGAAGG
TCTGCAAAGTCACGAAAGATCAAAGTGATGGATCTTTGAAGTTGAACAAA
TTTACTGGAAGTAAGTGTGCTATATAATAGTCATTAAAAGGTACAGACTA
TTATTCAATAATTTTATTTTGTTAGTGAAAATCAAAACCGTTCCGAACAT
AGTCAAAAGAAAGAGAACCAATTATAGACTTCGGAAAATTATTATCCCAA
AGTCTCCATTAATGGTCTTGAATGAAATAGTTGGCTCTGTGACTTACAAG
TTTGTTGAAAGTACCGTTCCATCAACCATTAACGGAATGGCCACTCTCTT
TACTGCTCAGTGCACGGTAAATGACAACTTATTTATTTATTTTAAATAAC
AAATTTCATGATTCTATATAGGTTGAGGGTCGTGATTATGAGGCTTCAGG
CCCTTCAAAACAAATGGCAAAGAACCTTTGCGCTGAAAGTGCAATTCAAG
CCCTTGTCTTTCAAAAGTGTAAAGACCCAAACAATTTCATGAAGGTGGAC
AAAGAAGGAAACCTTATTAAGCCCTACCAGATGGAAGATGAAACCCCTTG
GGCGCAACTCTCTTCTTTAGCTTTATTTAAGCTATTTAATGATTGGCAAG
CTAGTGGACATGAAGTCCCCGTTGAACTTCTACGTCCTCCTACGGATTCA
GAGGTTAAGGTTCCTCCTTCTCCGACTCCGCCAGTTGTTACAAAAGTAAA
TACCACCAAACGAGTAAGTATTTTTAATTTTTCAGATATAAAATTTATCT
TTCCCCTGATTTTTTTTAGCCACCAGGGGGATCCAAGAAATTGCCGGATA
ATCCTACTGAGCGTCATCCTGTACAACTTTTGAATGAGATTCAAGGTGGA
GTCAATTATGCCCTTGTAAGGGAGAAGCCCACGACACCCGTGATTTTCGT
AATGTCTGTCACTGTGGATGGAGTGACCTTTGAAGGAGAAGGGAAAAATA
AAAAGGATGCCAAAAGAAATTGTGCATTAGCTGCTCTTAAAAAAATATAT
GGCATTGTTTATCCCGTGAGAGATAACTAACTTATTAATTTACTAATTGT
TTTTTATCTGTCTATGCTTACTATCAATTTATTTCTGTACATATATTTTT
AATGTATGACGACGTTTTTTTTCGATTTTTTTTTTTAAATTTGGCTTCAA
TAATGTAATCCCATATAATGTAATTTTAAATACCTACATTTAGTTCGTTA
ATTTTAGCAAATTATCTTATCCTCTTTTTAAGTTTATCCCCCGATACTCA
AATCATTTTTTAAAATTTGATTTCAAAATATTTTTNTAGGAATACATAAT
TAATTATAATTAAATATTCACTTATAGTACATAATTATCGTAGGAAATCA
TTAATTCATATGAGACAGTTGTGTCAACTAAATAAACTCTAAGAATTTTG
AATAGATTAATTACTCATTAGATAATAATATGTACAAACTTTTCATTATC
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