EMLSAT00000012792, EMLSAT00000012792-708639 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012792
Unique NameEMLSAT00000012792-708639
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s971supercontigLSalAtl2s971:25266..25874 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012792 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012792EMLSAG00000012792-695558Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057451EMLSAE00000057451-766379Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769702auto769702Lepeophtheirus salmonispolypeptide
EMLSAP00000012792EMLSAP00000012792Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012792

>EMLSAP00000012792 ID=EMLSAP00000012792|Name=EMLSAP00000012792|organism=Lepeophtheirus salmonis|type=polypeptide|length=202bp
MPCNFISSCFLLDHQYWDRHCIAGSEEAGLRGVSNQARTVANQPGSVNGG
GGGRVGGSGSNSSSASSGNGSNPSSASSVVPESTTKIMKTFRAYLPPACH
RTYSCVHCRAXLANHDELISKSFQGSQGRAYLFNSVVNIGCGAAEERVLL
TGLHAVADIYCDCCKTTLGWKYEQAYESSQKYKEGKFIIELAHMIKENGW
ES
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mRNA from alignment at LSalAtl2s971:25266..25874-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012792-708639 ID=EMLSAT00000012792-708639|Name=EMLSAT00000012792|organism=Lepeophtheirus salmonis|type=mRNA|length=609bp|location=Sequence derived from alignment at LSalAtl2s971:25266..25874- (Lepeophtheirus salmonis)
ATGCCTTGTAACTTCATCTCCAGTTGTTTTTTACTGGATCATCAGTACTG
GGATCGCCATTGTATAGCGGGATCTGAAGAAGCCGGACTACGCGGCGTTT
CTAATCAAGCAAGAACAGTGGCTAATCAACCAGGAAGCGTGAATGGTGGA
GGGGGTGGACGGGTTGGAGGCTCAGGAAGTAATTCCTCTAGTGCTTCTTC
CGGAAACGGCTCTAACCCCTCCTCCGCCTCCTCTGTAGTTCCTGAAAGCA
CTACGAAAATAATGAAGACATTCAGAGCCTATTTGCCACCTGCATGTCAT
CGAACTTATAGCTGTGTCCATTGTCGGGCTCMTTTAGCGAATCATGACGA
ACTTATTTCTAAATCATTTCAAGGCTCTCAAGGGCGGGCTTATCTCTTTA
ATTCCGTCGTCAATATCGGGTGTGGAGCAGCAGAGGAGCGTGTCCTTCTC
ACTGGTCTTCACGCTGTAGCCGATATCTATTGTGATTGCTGTAAAACCAC
TCTTGGGTGGAAATATGAACAAGCCTACGAATCCAGCCAAAAATATAAAG
AAGGGAAATTTATAATTGAGCTAGCCCATATGATTAAGGAAAATGGATGG
GAAAGTTAA
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