EMLSAT00000012806, EMLSAT00000012806-708653 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012806
Unique NameEMLSAT00000012806-708653
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s975supercontigLSalAtl2s975:51220..53542 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012806 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012806EMLSAG00000012806-695572Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057499EMLSAE00000057499-766427Lepeophtheirus salmonisexon
EMLSAE00000057500EMLSAE00000057500-766428Lepeophtheirus salmonisexon
EMLSAE00000057501EMLSAE00000057501-766429Lepeophtheirus salmonisexon
EMLSAE00000057502EMLSAE00000057502-766430Lepeophtheirus salmonisexon
EMLSAE00000057503EMLSAE00000057503-766431Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770689auto770689Lepeophtheirus salmonispolypeptide
EMLSAP00000012806EMLSAP00000012806Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012806

>EMLSAP00000012806 ID=EMLSAP00000012806|Name=EMLSAP00000012806|organism=Lepeophtheirus salmonis|type=polypeptide|length=414bp
MSSKSEDSIGIIIGNIGKWQIQRIIANLLISLPGIAQIFVGAVFSMQIPD
FRCMDNSSSSYSKNCSKECTKYEYDTSFWTETVPMKFDMICGNDYLISIV
WNLECVSGKWKMIVGMMMALIWPFGRLLSVALAWNICEWRLMIQILSGVH
FVTPIIMYWVPESPRWLLASSKESNKKKAEEILRKVVKINKGNMELFEQN
IQNQIESSRRKDTSYHPYYKVFKSKTLRNRSFILFINWFTNSLVLYGLNL
NWKSLTGNLFTNFSIAAALDIVARILSIFILHQFSYKKVYTLSMFMVALS
FLLTFGFSLGDYENNYPVVILSMFGTFFISMTFSIIWIYTTEIFPTNYRN
GALGASSFVARIGGILATTMGPLSKVNENIPKAIFSVTTLTSAGLALLLP
ETGDSLPDAIEDCE
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mRNA from alignment at LSalAtl2s975:51220..53542-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012806-708653 ID=EMLSAT00000012806-708653|Name=EMLSAT00000012806|organism=Lepeophtheirus salmonis|type=mRNA|length=2323bp|location=Sequence derived from alignment at LSalAtl2s975:51220..53542- (Lepeophtheirus salmonis)
ATGTCTTCTAAAAGTGAAGACTCTATTGGAATCATTATAGGAAACATAGG
AAAATGGCAGATTCAAAGAATTATTGCAAATTTGTTAATATCATTGCCTG
GGATAGCACAAATATTTGTTGGTGCCGTGTTCTCTATGCAAATTCCCGAT
TTCCGTTGTATGGACAACTCAAGTTCTTCCTATAGCAAAAATTGTTCAAA
AGAATGCACCAAATACGAGTATGACACTTCCTTTTGGACCGAAACTGTTC
CTATGAAATTTGACATGATTTGTGGAAACGATTATCTCATATGTACGTAA
GAAAATTTGATTTATTTTGAGCAATAAGTCACGTTTGTAATTCATCAGTA
ATGACCAAAATGACCCTTTTTATTGGATTTGCTATTGGAACATTTTCAGC
AGGATTGATAGCTGATAAATTCGGAAGGAAAACATCGATTTTGATCATGT
CTCATTTGTTTTTCGCTTCAGGACTCGTACTGACCATTGTAAATTCATAC
TATTTTTTTTTTATTCGTATTATTGAGTATGGCTATTTCTGCAATTGGTA
TTTATACTTCAGCAATTGTTTGGAATCTGGAATGTGTTAGTGGTAAATGG
AAAATGATTGTTGGGATGATGATGGCCCTCATTTGGCCATTTGGAAGGTA
AAATAATTATAACTTTTTATCATAGATTTATTAAATATATATATATTACA
GGCTTCTTTCTGTGGCTTTAGCCTGGAATATTTGTGAATGGAGGTTAATG
ATTCAAATTTTGAGTGGAGTACATTTTGTAACACCAATTATTATGTACTG
GGTACCAGAGAGTCCTCGGTGGCTTTTAGCATCAAGTAAAGAGAGTAATA
AAAAAAAAGCAGAAGAAATTCTTAGAAAAGTTGTTAAGATTAATAAGGGG
AACATGGAATTATTCGAACAGAATATACAAAATCAAATCGAATCATCTCG
TAGAAAGGATACAAGCTACCATCCATATTATAAAGTTTTTAAGTCAAAAA
CTCTAAGAAATAGAAGCTTCATATTATTCATAAATTGGTTTACTAATAGT
CTTGTTCTTTATGGCCTTAATCTTAATTGGAAGTCACTTACTGGAAATCT
CTTCACCAATTTTTCAATTGCAGCGTAATAATAGTTTCTATAAATTCAAC
TTATATATACTAAAATATGTAGTTTAGATAAGTAAATTTAATCTAAATTA
CTTGCAATATTATCAGCAAAGCAAAATTCAAATCACGAATCAACTAGCTG
ATTACTAGACCTTTTATGAGTATTTCTTTGATAACAAATAACATTTTTTA
CATGAAGAAAAAAAAACACAAAAGTAATATTTCATAAATTAACAATCATT
CAAGCTTTGCTTAATATAATCTTAATGTATGTTTTCCAGAGCGTATTTCT
ATTTTAAATAGAAGAACTTACCTATACCAAATATGTTATAATATTTTTTC
TTAATAGAGCTTTAGATATCGTTGCAAGGATACTGTCAATATTTATTCTA
CACCAATTTAGCTATAAGAAAGTATACACACTATCAATGTTCATGGTTGC
ATTAAGCTTTCTCCTGACGTTTGGTTTTAGCCTTGGAGATTATGAAAATA
ATTACCCAGTTGTCATTCTCTCCATGTTTGGAACATTTTTTATATCGATG
ACTTTTTCTATAATTTGGATTTATACTACAGAAATATTCCCAACGAATTA
CAGGTGACAAATACTTTATTTACCTTGACCTATTACATACTATTTGTTGA
AATTATTCACTCTACTTTTGTTAAGTACGTAGAGTGACTCATAATTATTG
TGGAGATAAAAATGAAACGAAAACATAATTGACATCAATTTAACACTTGT
TAAAAACTCATATACGCTACACATATTACTCCCATCCAAATATAAATCAT
CAAATTGATTGTATGAAGAGAACTATTTCCTTTATTTATGAAGCATAACT
TGTAATTATGAGTCTATATGTGAAAAGTAGAAACATTTATAATTCTTTAA
TAAATAAAAAATATCTAATACATTTCCATATTAATTAATTATTATCAAAA
TTTACATTTTTTTTTAAATTTTAAATAAGTTATTTTACTCCATGTAAAAC
TTTAATATTATACACTTTTTATAGAAATGGAGCACTTGGCGCCTCTTCCT
TTGTTGCAAGAATCGGAGGTATATTAGCAACTACGATGGGCCCCTTATCT
AAAGTAAACGAAAATATTCCGAAGGCAATATTTTCTGTAACAACTTTGAC
ATCTGCTGGCTTGGCACTTCTACTCCCCGAAACAGGAGATTCGCTTCCTG
ATGCTATTGAAGATTGTGAATAA
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