EMLSAT00000012836, EMLSAT00000012836-708683 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012836
Unique NameEMLSAT00000012836-708683
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:1367950..1370951 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012836 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012836EMLSAG00000012836-695602Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057644EMLSAE00000057644-766572Lepeophtheirus salmonisexon
EMLSAE00000057645EMLSAE00000057645-766573Lepeophtheirus salmonisexon
EMLSAE00000057646EMLSAE00000057646-766574Lepeophtheirus salmonisexon
EMLSAE00000057647EMLSAE00000057647-766575Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780699auto780699Lepeophtheirus salmonispolypeptide
EMLSAP00000012836EMLSAP00000012836Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012836

>EMLSAP00000012836 ID=EMLSAP00000012836|Name=EMLSAP00000012836|organism=Lepeophtheirus salmonis|type=polypeptide|length=491bp
MHYLAIVHSRNISSLRSLRSEHLPILKNIYKDGTKAIFDKHGIRPSQMRV
YLHYQPSFYHLHVHFVPLLNQKGGIHVEKAHLLQDIIDNIENYPNFYEEA
SISFGLKESDRLYQYYKDAGYNFELAPNPEANHDNLLTFFKYLGQAKHEP
CGEHWLMTFGESAWRMAILSMCLPSSVDRVRLCKISLTSAFTCFGTKTDQ
NSQWSSKLSEVKKELFRLLPFSKAVELYDMYSFHVATRMGQNCNSNLSTA
YRGILEVEEALLQTEELAKEEELSHEEVMRILINRMDKAKFMGYEKYEKF
GDDSEFRSIIKFIQQVSSLTKLKRTGWVRFGVNNPETVASHMFRMGLMSL
IFSDCTSKDIRNGSSVIVSLLHDVAECIVGDITPVDGVSNEDKHAREMKA
IGDITKPLRGDLGLDIFTNFERYEFQKDAEAKLTKEIDKLDMIIQAHEYE
VMKKEKFLQEFFDSTVGKNIFAIDVTKKHAQHLVNIRAKFN
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mRNA from alignment at LSalAtl2s97:1367950..1370951+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012836-708683 ID=EMLSAT00000012836-708683|Name=EMLSAT00000012836|organism=Lepeophtheirus salmonis|type=mRNA|length=3002bp|location=Sequence derived from alignment at LSalAtl2s97:1367950..1370951+ (Lepeophtheirus salmonis)
TTCAAATCCTCAATCAACAAACATTTACATACGGAGCAAGAACGAATCCC
TCATTCTCAACAATCACTAGTCAGAGATCCATCAAATTTGAAACCATGGA
CGTACAGGAGGCGGAAGAAATGTCCTTGACTCATTTGCGAGATTTCAAAA
TCAAGCGAAAGCTAAATCATGATCCTGAACATAAATTAGTGGCCATTGAG
GGCTATTTTACTTGGGACAAGGATCGGCCTGCACTCCTTCTCTTGGAAAA
GTCCATTCTTTCCATGGATAGCGTCAAGAGTATCTTGGACTCCCAAGAGA
CAGAGCTTAAAAATATCATGCACAATGACATTTATAGACAGGAATGCTAA
AATGTAATTTTCGTTCATGACGATTAGATTTTTATTAACTATTCTGTGGG
GAATGTTACAATCCTTGGAGTTTCATTCTCTCCAGAGCTAAACACGTACT
CATATATATATATAAAATACATATTGAATCGAAAATTGCATTTTAAACTC
TTCCCTTTGTAGTACAATGCACTCGTGAGTCCGACATTAAATCCTTTACT
GGCTAAACTCATTTAYCCTGCCACTCAAAAACATATTAATAAGTACACAC
ATAGCCCATTCCATATCATTCAAGAGTCAAGTGCACTCTATTGCACCTTG
ACTCAAGATTACTTGAAAGAAAATACATTTTCTTTAGATTGGGTCTATAA
TATACTTGATCATAAAAAAGTAAGGCAATTCTATTCGAGTTTCGATACAT
GTCATAATATCTATTTATTCCAAGGAACAAGAACACATTTTATTTGAAAA
CTCGGATCCTGAGTCGGGATATATCGTGGCCAAAGATTATAATTGGGATG
GTAAAAATATTGAAGATATGCATTACTTAGCCATCGTTCATAGTCGAAAC
ATATCATCATTAAGATCATTGCGTTCTGAACATTTACCCATACTGAAGAA
TATTTATAAGGATGGCACAAAAGCCATTTTTGATAAGCACGGTATTCGTC
CATCCCAAATGAGAGTGTACTTACATTATCAACCCTCCTTTTATCATCTC
CACGTTCATTTTGTTCCTCTGCTCAATCAAAAGGGTGGGATACATGTAGA
AAAAGCTCATCTATTGCAAGATATTATCGACAACATTGAAAATTATCCAA
ATTTTTATGAAGAAGCTTCCATTTCCTTTGGGTTAAAGGAAAGTGATCGT
CTGTATCAGTATTATAAGGATGCAGGATATAATTTTGAATTAGGTTTGTT
GCATAGGAATTATGTAATATTTTTAATCATTTTTTTTTTTATAGCACCGA
ATCCTGAAGCTAATCATGATAATCTACTCACTTTTTTTAAATACCTTGGA
CAAGCAAAACATGAGCCTTGTGGAGAGCACTGGCTAATGACATTTGGGGA
ATCTGCTTGGCGTATGGCTATACTGTCAATGTGTCTTCCTTCCTCAGTAG
ATCGTGTTCGATTATGCAAAATATCTTTGACTTCAGCCTTCACTTGTTTT
GGAACCAAAACAGATCAAAATTCACAATGGTCGAGCAAGTTAAGTGAAGT
GAAAAAAGAACTTTTTCGACTCTTACCCTTTTCAAAGGCCGTTGAGCTGT
ATGATATGTACTCTTTCCATGTTGCCACGAGAATGGGGCAAAACTGTAAT
TCTAATCTTAGTACAGCATATCGTGGCATCTTAGAGGTGGAAGAGGCTTT
ACTTCAAACGGAAGAATTAGCTAAGGAGGAAGAGCTTTCCCATGAAGAAG
TAATGAGGATTCTTATCAATCGGATGGACAAAGCGAAATTCATGGGCTAT
GAAAAATACGAAAAGTTTGGGGATGATTCGGAATTCCGATCTATTATAAA
ATTTATACAGCAAGTATCATCTCTCACCAAATTAAAAAGAACTGGTTGGG
TTCGATTTGGTGTCAATAACCCCGAAACTGTTGCCAGTCACATGTTTAGA
ATGGGTTTAATGAGTCTTATATTTTCTGATTGTACATCTAAAGACATCAG
AAATGGATCTTCTGTTATCGTTTCGTTACTCCATGATGTAGCTGAATGTA
TTGTTGGAGACATTACTCCTGTTGATGGTGTTTCAAATGAAGATAAACAT
GCTCGTGAAATGAAAGCTATTGGTGACATTACGAAACCCCTTCGTGGAGA
CCTAGGATTGGACATTTTCACTAATTTCGAAAGATATGAGTTTCAAAAAG
ATGCAGAAGCTAAATTGACCAAAGAGATTGATAAACTGGATATGATTATT
CAGGCTCATGAATATGAAGTTATGAAAAAAGAAAAGTTTTTACAAGAGTT
CTTCGATTCCACAGTAGGGAAAAATATATTTGCTATCGATGTTACAAAAA
AACATGCTCAACACTTGGTTAATATCAGAGCCAAATTTAACTAACAATTT
AACAATTTTGTTCCTTTATCAATAAGTGTCTTTTTATTTAAAAAAAAATA
AAAACATGGTATTAGTGATTATAATTTTTTGATTTAGTTACTTTGAAAGG
ATGTATATTAAAAATACAAAATACTGATTTTCTAATTTCATAAATGTCAT
GATCTGTTATAGAAAAAGTTAATAAATCTTGTGATCTTGATGAATATTTT
TAAAATAGCTTGAATCAGTGTTGGTCCTGGCAATGGTTGAGTAGTTGTGT
CGACTAATTTTTCATTGATTTCGTGCAAAATATTTGTCAATGAACGACAG
TCTCCTCTCCAGCAATATTTAAATTTGTCGCATCGAATTCCTGGTAGGGA
TGCCACTGTCGTTGTCTCTTTCGTCGTAGAATTCCCACATATTAATTCTT
GGCATGGTGAGCTTGATTCGTTAGTTCTGTAGGTGAACGCAGTCCCGAGA
GCAGCTGTACTTATAAATCATTTCACAAATTATATATGAGTCAAACATAT
TATCATCGTTTTATAAATTGTAAAAAATGAGGATCAATATTATTAAATTC
AAAATAGCCATAGTTATCTTTTTGTTTACATATAAGGCATTAACAATTAA
AA
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