EMLSAT00000012837, EMLSAT00000012837-708684 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012837
Unique NameEMLSAT00000012837-708684
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:1370496..1373131 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012837 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012837EMLSAG00000012837-695603Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057648EMLSAE00000057648-766576Lepeophtheirus salmonisexon
EMLSAE00000057649EMLSAE00000057649-766577Lepeophtheirus salmonisexon
EMLSAE00000057650EMLSAE00000057650-766578Lepeophtheirus salmonisexon
EMLSAE00000057651EMLSAE00000057651-766579Lepeophtheirus salmonisexon
EMLSAE00000057652EMLSAE00000057652-766580Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780703auto780703Lepeophtheirus salmonispolypeptide
EMLSAP00000012837EMLSAP00000012837Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012837

>EMLSAP00000012837 ID=EMLSAP00000012837|Name=EMLSAP00000012837|organism=Lepeophtheirus salmonis|type=polypeptide|length=370bp
MGLGKWTALSITLVILSISSTLVDSRKQDKVTLTIAVYRDQAYVDYFNSV
NNLXXXEXLKIXSXAMKYFLGSDSLEPQIDVQFIIRDTLFTFEEYGISTD
TFLTIFNDFHNTEMKSSSAKWDHAILLTGNGSKPEGLTNFGGFCNVNTSG
TVVKAESLHITPLMGVRYIARNMGMEWDIQSTDNYIMKQELGPGISGWXK
KSQTFWDKLSNNKECFKRDLTVEFNLLNYLPGFRTDLNQQCQGKRKYHSQ
IIFVFILMFIYKKENIMLSALGTAFTYRTNESSSPCQELICGNSTTKETT
TVASLPGIRCDKFKYCWRGDCRSLTNILHEINEKLVDTTTQPLPGPTLIQ
AILKIFIKITRFINFFYNRS
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mRNA from alignment at LSalAtl2s97:1370496..1373131-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012837-708684 ID=EMLSAT00000012837-708684|Name=EMLSAT00000012837|organism=Lepeophtheirus salmonis|type=mRNA|length=2636bp|location=Sequence derived from alignment at LSalAtl2s97:1370496..1373131- (Lepeophtheirus salmonis)
ATGGGGTTAGGAAAATGGACTGCTCTCTCAATTACATTAGTCATCTTATC
TATATCCTCTACTCTGGTGGATTCTAGGTATGACGACAAGGAACAACAAG
ATTTTGATAACAATATGTAAATATCAGAGATTTTCAAGTTATGAAAATAT
GTCCTGGATACATCTCTTACAATTTAATTAGGGTCTAACATTTTAAATTA
ATTATAAATATACTAAGGTTCATCCCTATCAATAGTTCATATGACTCATT
TAACCCATGTCTTTTGGAGAATAAAAGGCTCAGCCATTCCCATTTATTTG
TAATAAGGAAGTCATCAATTTGAGTATGACGTGTGCCTTGTAATTTGGCC
ACATGAATTTATAAATGTAGAAAAGTACATAACAAAAATCAAAGAGTATG
TTGCCTCATATTTTTATTTTTTTTCGAAAATTCATATTTGTTTTTTCTGA
GTTAATTTACTACTGTATAAGATTTCATGTCAGTAAATAATTATAAGTGG
TTTCTAGAAATTATTCATTTCTAGTGTAGGATTTACCAATCATGAAAGGA
AGAAAAAAAGATTATAGCTCAAGTCAAACAATTGGATTGGAATATAAAAA
AAAATAGATTCCACTCTATTGTGTTTGACTCAATAGAAATAAGAATTTGT
ACGTAGCTTCATTAGTTGGTTAATAATTTTATTCTTTGATCATGTAAGCA
AAAAGAACAATGGATAGGAGTGGATTATTAGATATCATCTATTTAAAACT
TCTTGTATAAAATTGCAAAAGTCCTACTTAAATATTTTTTAAATGGATAA
TAATTAGAACGGGTTTTGCTTAAGTAGGGCTTTTTTTAAGGCTATTTCAA
TCAAATCTACCTATCATAATAGCAATGACAGTTTCAAACAGTCCAATATA
TTCGCAGAACCAATTTAGCCAAATTGTAAGCATCTCTATCTCTCTCTCTT
CCCGTATATTCATTCAAAATTTTACCATAGACTAATCAAATAATGAGAAA
AATTTCGTTTCAGAAAACAAGACAAAGTAACTTTAACCATTGCTGTCTAT
CGGGATCAAGCTTATGTTGATTACTTTAATAGTGTAAACAACTTAGMCGM
CCKGGAGGYTTTAAAAATTCWTTCGYCCGCCATGAAGTATTTTCTAGGTA
GTGACTCTTTAGAACCACAAATTGATGTGCAATTCATAATTCGAGACACT
CTTTTCACATTCGAAGAGTATGGAATATCCACAGACACATTTTTGACTAT
TTTTAATGATTTTCATAATACGGAAATGGTAAGCCACGTATCATAATTTC
AAAGAATCTTCACATTTGGTCTAAATCTAATAAATATACCCTTTATATAA
ATCATTTAAATATTCTCTCATCGATATATTTTAAAATATGTTGTAGCTTT
ATTTAACCGGTCATAAAAGTATTTACATAACATTCCTTTTTAGAAGTCTA
GCTCTGCAAAGTGGGATCATGCCATTTTACTGACTGGAAATGGATCCAAA
CCTGAAGGATTAACGAATTTTGGAGGTTTCTGCAATGTCAACACAAGGTA
ATTTTGTTTTATACATAACTATAAACACGTTGCTTCCAATTCAATGTATG
CTTAAAAGTTGGTTGACTAACCAGAGTTGAAATTCTAAGATTAAGGCTTT
ACAAGGGGGGAATAGATATGTTAAGTAAAATATTTTACCTTTATTTTTAC
TAAAAATTTAAAGTATTTTAAATTTTAATACAATAAATAAGTCATTATTG
TATCTGTTCCATAGTGGAACCGTAGTTAAAGCAGAAAGTCTTCATATAAC
GCCTCTCATGGGTGTTCGTTACATTGCAAGAAACATGGGAATGGAATGGG
ACATCCAAAGCACAGATAATTACATTATGAAACAAGAACTCGGTCCTGGT
ATTAGTGGATGGKCAAAGAAGAGCCAAACGTTTTGGGATAAATTATCAAA
CAATAAAGAGTGCTTCAAAAGAGACTTAACAGTTGAATTTAACTTATTAA
ATTATCTACCGGGCTTTCGAACAGACCTTAATCAACAATGTCAAGGAAAG
AGAAAATATCATTCGCAAATTATATTTGTTTTTATTCTAATGTTCATTTA
CAAAAAAGAAAATATTATGCTATGTATGTATATATATTAATTGAAATTTA
TCAAAAACTTCCTTTCCTTTTTAGTTTAATTTTTAATTGTTAATGCCTTA
TATGTAAACAAAAAGATAACTATGGCTATTTTGAATTTAATAATATTGAT
CCTCATTTTTTACAATTTATAAAACGATGATAATATGTTTGACTCATATA
TAATTTGTGAAATGATTTATAAGTACAGCTGCTCTCGGGACTGCGTTCAC
CTACAGAACTAACGAATCAAGCTCACCATGCCAAGAATTAATATGTGGGA
ATTCTACGACGAAAGAGACAACGACAGTGGCATCCCTACCAGGAATTCGA
TGCGACAAATTTAAATATTGCTGGAGAGGAGACTGTCGTTCATTGACAAA
TATTTTGCACGAAATCAATGAAAAATTAGTCGACACAACTACTCAACCAT
TGCCAGGACCAACACTGATTCAAGCTATTTTAAAAATATTCATCAAGATC
ACAAGATTTATTAACTTTTTCTATAACAGATCATGA
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