EMLSAT00000012839, EMLSAT00000012839-708686 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012839
Unique NameEMLSAT00000012839-708686
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:1769158..1769484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012839 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012839EMLSAG00000012839-695605Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057656EMLSAE00000057656-766584Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780874auto780874Lepeophtheirus salmonispolypeptide
EMLSAP00000012839EMLSAP00000012839Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012839

>EMLSAP00000012839 ID=EMLSAP00000012839|Name=EMLSAP00000012839|organism=Lepeophtheirus salmonis|type=polypeptide|length=108bp
MSVTRLGLNVVRSSQMISQRSLGLSAVALQQKAALDPVQQIFVDKVREYA
TKKKATGGLVEATPAVDAELKFELNKIAKAYGGGEGVDMTKFPSFNFGEP
QIEVPTLK
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mRNA from alignment at LSalAtl2s97:1769158..1769484-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012839-708686 ID=EMLSAT00000012839-708686|Name=EMLSAT00000012839|organism=Lepeophtheirus salmonis|type=mRNA|length=327bp|location=Sequence derived from alignment at LSalAtl2s97:1769158..1769484- (Lepeophtheirus salmonis)
ATGTCTGTTACACGTTTGGGATTAAATGTCGTTCGCTCTTCTCAGATGAT
CTCTCAAAGATCCTTGGGACTCAGTGCTGTCGCTCTTCAACAGAAAGCTG
CTTTGGATCCCGTTCAGCAAATCTTTGTCGACAAAGTCCGTGAATACGCC
ACGAAGAAGAAGGCCACAGGTGGACTCGTAGAGGCTACTCCTGCTGTTGA
TGCCGAACTCAAATTTGAACTCAATAAGATTGCAAAAGCATACGGAGGTG
GAGAAGGTGTTGATATGACTAAGTTTCCGTCCTTTAACTTTGGCGAACCC
CAAATTGAGGTTCCTACTTTGAAATAG
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