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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s97 | supercontig | LSalAtl2s97:2001450..2009277 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012844 >EMLSAP00000012844 ID=EMLSAP00000012844|Name=EMLSAP00000012844|organism=Lepeophtheirus salmonis|type=polypeptide|length=2528bp
MNLESLSFALSQISYLIASLTKKNYKSSTSECLSLISTFGPEAERHLFRC
LFSRVDFSLENKPPISQELQFLISKVDDLLSSQSHFVSVLCFSLDNPLHH
QKTLRPSPDLLSNLSLNLRLSPIKDILFSLALTHSSILEIKALAQSFFIK
KFSEYANNNLASDSKVDNDTDINSLSEGINYILTTIYENEDYKALRVDGS
LDKFINYLNQEYCSSDAEAPTALLPFLDLNHQDPDPSLLAAAISEITMAS
KGLLDGSIPDVIRELGYQFTSNSEHCRDMLQKLCRGQEIHAQMVARIIGV
MVRTHSGLDEGVNTSSNANNIWDKDKGAGEPTSWNMDVFIKVVNELQPTL
HWKEIIYELDHPGFLVPDRQGLMLLIKALRLGLQAQGFQGPFPFEMFYRH
WKNTEGQVSLFQHCLQNPEIFSLADHHHHSAAFEVLKVPPDLQSREVSSW
VSLELVDALLYLAEHGQSHIVTELFKFPQTHCPDVLALSLLQLNTPITPL
RRDLLTVLFQIFLANHPNSLVILAHAWNMPAFKVIVIQAMDEYYRKXAEE
GDCEHSRLSRILDVAQDLKALSVMLNAQPIPFIIDLAVLASRREYLKLEK
WLTDQMMDHGEASVKAVVQYLQRKIPAIMGSVPVKEEYVLKSNIPLDALP
IILMCLQQIITNGARIQMDLRETIITMVSNCQGILSRRQSQQQPPVPPPV
VLRPPSRSTLESSGTGGFGSGNSTLNNTTSSNGCPIRTTPRLPSNSMFPV
HDPIAGISSQFPGGLNLNAPTSSSAISLGPLVSGPGSPSRIFGNPTTSVE
SSSQFGGIMPQPPPHHHIXATVSNSTTAVGTTGAGTSMPSGMQSGIEQLR
QGNIANLLPDMCGPVSKEIEDETNSYFQRIYNRPPYPTLSIDEVLDLLKK
FQDSPNQRERSLFNCMIKNLFEEYQFFYQYPDAELHITSQLFGGIIERGL
VPTIPLGIALRYVLEALRKRLDSNLYIFGITALDRFKTRLKDYPQYCQHI
SCIPHFKDFPPHLIEWVEFGSQSLVPPGEPQAPDGSFRPSSQRRSTEIET
LPTQTTXLQVAKTTVTVTSTTSSSTTIVRPSISTVGGRPSIANTTNIDTL
INARQATGHSELVVPSVDIQDKIAFIFNNLSLMNMQQKAADLREQLKDDI
YTVWLAQYLVMKRASIEPNFHNVYSSFLEVLCMNSLYDDVIIETYHNIRI
LLRSDKVQFSCSDRTLLKNLGHWLGLMTLARNRPILTIELDTKPLIIEAY
HNGQHELFYIVPFIAKVMESCARSRVFKPPCPWTMGIMNLLAELHQEHDL
KLNLKFEIEVLCKTLNLDLNTLSPGNLLKDYDRLHKILNVKNFSLQHHQT
SIQSHHPVALAKPGGAEPSFVMPTGHKLEHGGVMHGGNVTSSSNIGXFNT
PVTSVQPGSAGAGMGAALVATPIISLTGSAALMGGMGMQGQNPRLYDTSH
PESLAGPPQTNEPMTPPVIQQQPASSNNTVTPATLVRQSEPKFHFTDINT
SNLNGIVPHISIDSRLTLLRDQPDLVQLIKLAIEKSIQEWASPVIDRAIK
IALTTCEQIVKKDCALDHDENRLRHSAHYMVRNLTAGMAMITCRDHLLLS
IKTHLKNFMITLGRNLTPNQTEAIEMTVSVIANDNVELACAFIQKKAIEK
AIPEIDKRLKGEYDNRILARKEGRRHWDGAALAYQAERMPEMIRLKVGAV
SQQQNAVYEEFAHNIPGFKPLTDREILAIAPKPLVDPGPVVLSSSSNTMA
PSEDCIAILDEVFSKLEPFVANCTGLPTTPHMANLHALVQNXAVTRSSKE
VNTISLLIHKAVEGLLEGLTPNLPVETENLARYRDANLLVLRALSDPRAF
GANWTSRQVTLALIEAREELKYNLDAVDILIRSGFVSLLDYDKHLSQAMQ
GGENVIATAFAMHLCKIYLIDDRSNAHIIESDLFGTIETLQKISTNSPRP
PDGIISLMEMIKMSSERLEQNLAMAGPTGQXHSGIQQAREFGDPRGLLEK
TEFLLREWVNAYHSRDAGKDSRQAFFIFVKRMNEHGILKTDDLITRFFRM
STQMCVDLCYRALAEQNNSPTLVRAKCFHTLDAYVRLITLLVKHSGETQN
TVTKVNLLNKVLGIVAGXLLIDHDVRNTGFQQVPYHRIFIMLFLELNTPD
HILATINFQVLMAYSNMLHLLRPAKAPGFAYAWLEIVSHRVFMQQVLVNS
PQAKSWPMYAQLLADLFKFLAPFLRNAELAKPVHRLFRGTQRVLLVLLHD
FPDFLSDYHYTFCDVIPPNCIQMRNLILSAFPRSMRLPDPFMPNLKVDML
PEISIAPRMCANYSAMLKPSFKKELDSYLKNRGPVSFLVEVRSHLVINGS
GGESGGNGTNCSNRYNIQMINALVMHVGIXAINYIRSKQLAPNMATIAHS
SHMDIFQNLAVDLETEGRYLFLNCIANQLRYPNSHTHYFSCTLLYLFAEA
NTQAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWTHDFVHC
APEIRKLFESVARSCMVPSLPRDNGDNE back to topmRNA from alignment at LSalAtl2s97:2001450..2009277- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012844-708691 ID=EMLSAT00000012844-708691|Name=EMLSAT00000012844|organism=Lepeophtheirus salmonis|type=mRNA|length=7828bp|location=Sequence derived from alignment at LSalAtl2s97:2001450..2009277- (Lepeophtheirus salmonis)
ATGAACCTAGAGTCTCTATCCTTCGCTCTATCTCAGATCAGTTATTTGGT
AATTGCTGACTCATTGATTTAATCCTCTTTGATTTCCCTATTTCCCTATT
TCCCTTGTAGATTGCGAGTTTGACGAAGAAAAACTACAAGAGTAGCACAA
GCGAGTGCCTTTCCTTAATATCCACGTTCGGGCCCGAGGCTGAGAGACAT
TTATTCCGCTGTCTCTTTTCTCGAGTCGATTTCTCTCTTGAAAATAAGCC
TCCGATTTCTCAAGAGTTGCAAGTAAGTGTGCGGCGCTGTTTGTCTCGTC
CTTACTCCTACATTTTTACTCTTTTTAGTTTCTTATAAGTAAAGTTGACG
ACCTACTTAGTTCTCAAAGTCACTTTGTCTCCGTTTTGTGCTTCTCTCTG
GATAATCCATTGCATCATCAAAAGACATTGAGGCCTTCGCCTGATTTACT
ATCCAATTTATCATTGAATCTTCGATTGTCGCCAATTAAAGATATTTTAT
TCTCCTTGGCCTTAACACATTCCTCTATTTTGGAAATTAAAGCCTTAGCG
CAATCCTTCTTTATAAAGAAATTTTCAGAGTACGCTAACAATAACTTAGC
GTCTGACTCAAAGGTTACTATTTTCTTTTTTTTTCCTTTTCTTTTTTCGT
TAATCAAAACTTTATTCTTAGGTTGATAACGACACAGACATCAATTCACT
GTCTGAAGGTATTAATTATATATTGACAACGATTTATGAAAACGAAGATT
ATAAGGCTCTAAGAGTAGACGGATCATTGGACAAGTTTATAAATTACTTA
AATCAAGAGTATTGTTCTTCAGACGCAGTGAGATATTGTGGAATACCCAA
TCCCTTTTAAATAGCTAAATCATTGTTATTATCTCTTTTTAGGAAGCTCC
TACTGCTTTATTACCCTTTCTGGACTTGAATCATCAAGACCCTGATCCAT
CTCTATTAGCTGCTGCAATCAGTGAAATCACAATGGCGTCTAAGGGTCTT
TTAGATGGATCTATCCCAGATGTCATTCGAGAATTGGGGTATCAGTTCAC
TAGTAACAGTGAGCATTGCAGAGATATGTTGCAAAAACTCTGTAGAGGTC
AAGAAATACATGCGCAAATGGTTGCTCGTATAATTGGCGTCATGGTAAGG
ACTCATTCTGGGCTGGATGAGGGAGTGAATACTTCATCTAACGCAAATAA
TATTTGGGACAAAGATAAAGGTGCTGGTGAGCCGACCTCCTGGAACATGG
ATGTTTTTATTAAAGTTGTAAATGAATTACAACCTACGTTACACTGGAAA
GAAATCATTTATGAGTTAGATCATCCAGGTTTCCTTGTGCCAGATAGGCA
AGGTCTCATGCTTTTGATAAAAGCTTTGAGATTAGGTCTCCAAGCTCAGG
GATTTCAAGGACCTTTTCCTTTTGAAATGTTTTATAGACATTGGAAAAAC
ACAGAAGGTCAAGTTAGTCTTTTCCAACATTGCCTTCAAAACCCAGAGAT
TTTCTCTCTTGCGGATCATCATCATCATTCTGCAGCTTTTGAAGTATTAA
AAGTACCTCCAGACTTGCAAAGTCGAGAAGTTTCATCTTGGGTTTCTTTG
GAACTTGTCGATGCCCTTCTCTACTTGGCTGAACATGGACAATCCCATAT
TGTGACAGAATTGTTCAAATTTCCTCAAACACATTGTCCTGATGTCTTGG
CTCTCTCATTGTTACAACTAAATACCCCTATTACACCTTTGCGTAGGGAT
TTACTTACAGTCCTGTTTCAGATATTTTTGGCAAATCATCCTAATTCATT
AGTCATACTTGCGCATGCGTGGAACATGCCAGCTTTTAAAGTGATAGTTA
TTCAAGCGATGGACGAGTATTATCGTAAASCTGCCGAAGAAGGTGATTGC
GAGCATTCTCGACTTTCCCGTATTCTGGACGTGGCACAAGACCTTAAAGC
GCTATCTGTGATGCTTAATGCTCAACCCATACCTTTTATCATCGATCTAG
CTGTACTTGCATCAAGGAGAGAATATTTAAAACTCGAAAAGTGGTTGACG
GATCAGATGATGGACCACGGTGAAGCTTCTGTGAAGGCCGTCGTTCAATA
TTTGCAAAGAAAAATTCCAGCTATAATGGGATCTGTTCCTGTGAAAGAAG
AATATGTTCTTAAAAGTAATATTCCGTTAGATGCTCTCCCCATCATTTTA
ATGTGTCTTCAACAAATCATTACCAATGGCGCTAGAATACAAATGGATCT
GAGAGAAACAATTATAACTATGGTCTCAAATTGTCAGGGTATATTAAGTA
GAAGACAATCTCAACAACAGCCTCCTGTACCTCCACCAGTCGTACTGAGA
CCTCCTTCAAGATCAACCTTGGAGTCTAGTGGGACAGGCGGTTTTGGTAG
TGGAAATTCAACTTTAAATAACACAACATCGTCAAATGGTTGTCCTATAC
GTACCACTCCACGATTACCCAGTAACAGCATGTTCCCAGTACATGATCCA
ATTGCGGGGATATCCAGCCAATTCCCCGGGGGGTTAAATTTAAACGCTCC
AACTAGTTCCAGTGCAATAAGTCTTGGACCATTGGTATCTGGACCAGGGT
CACCGAGTCGCATATTTGGGAATCCCACTACGTCGGTAGAAAGTTCCTCC
CAGTTTGGAGGAATTATGCCTCAACCGCCTCCACATCATCATATCRCCGC
CACTGTATCAAACTCAACGACTGCAGTTGGAACAACTGGTGCTGGTACCA
GCATGCCCAGTGGTATGCAGTCTGGAATTGAACAACTTCGTCAAGGAAAT
ATTGCTAACTTGTTGCCAGATATGTGTGGTCCTGTATCTAAGGAGATTGA
AGACGAAACAAACAGCTACTTCCAAAGAATATATAACCGTCCGCCTTATC
CAACATTATCGATTGATGAGGTTCTGGACTTGCTTAAAAAATTTCAAGAT
TCTCCAAACCAGCGAGAAAGAAGCCTTTTTAATTGTATGATTAAAAACCT
GTTCGAAGAATATCAGTTTTTCTATCAATATCCCGACGCCGAGCTCCACA
TTACCTCCCAGCTTTTCGGGGGCATAATAGAAAGAGGACTTGTGCCAACT
ATTCCTCTTGGTATTGCTCTTAGATATGTCTTAGAAGCGCTAAGAAAACG
TCTGGATAGTAATCTATACATCTTTGGGATTACAGCGCTGGATCGATTTA
AAACACGATTAAAAGATTATCCTCAATATTGCCAACATATTAGTTGTATT
CCTCATTTCAAAGACTTTCCTCCTCATTTAATCGAATGGGTTGAATTTGG
TTCCCAGTCATTAGTACCACCTGGTGAGCCTCAGGCTCCAGATGGATCTT
TTAGGCCTTCGTCACAAAGACGCAGTACTGAAATTGAAACTTTGCCTACT
CAAACAACCKCCCTTCAAGTAGCCAAAACTACCGTCACCGTTACAAGCAC
AACCTCTAGCTCAACAACGATTGTACGTCCATCAATTTCTACCGTTGGGG
GTCGTCCATCTATTGCTAATACAACCAATATCGACACTTTAATCAATGCA
AGGCAAGCGACAGGCCATTCGGAACTTGTAGTTCCATCTGTGGATATACA
GGATAAAATAGCGTTTATTTTTAATAATCTAAGTCTCATGAACATGCAAC
AAAAGGCTGCGGATTTGAGGGAACAACTCAAAGATGATATTTACACTGTA
TGGTTAGCTCAATATTTGGTCATGAAACGTGCCAGCATTGAACCAAACTT
TCACAATGTGTACTCGAGTTTTTTGGAAGTTCTATGTATGAACTCATTGT
ATGATGATGTAATTATAGAAACTTATCACAACATCCGTATCTTGTTGCGG
AGTGACAAAGTTCAATTTAGCTGTTCTGATAGAACGCTTCTTAAGAATCT
TGGACATTGGTTAGGCTTAATGACCCTGGCTCGAAATAGACCTATTTTAA
CGATAGAACTTGACACCAAACCTCTTATAATTGAAGCTTATCACAATGGA
CAACATGAATTATTTTACATAGTACCTTTTATAGCCAAAGTTATGGAATC
TTGTGCTAGAAGTAGGGTTTTTAAGCCACCTTGTCCCTGGACAATGGGAA
TCATGAATCTTTTAGCGGAATTGCATCAAGAACATGATCTGAAACTCAAT
TTAAAGTTTGAAATAGAAGTTTTGTGTAAGACTCTCAACCTGGATTTAAA
TACCTTGAGTCCTGGAAACTTACTAAAGGATTATGATAGACTGCACAAAA
TACTGAACGTTAAAAATTTTTCCCTACAACATCATCAGACCTCTATACAA
TCTCATCACCCAGTTGCTTTGGCAAAACCTGGTGGGGCGGAACCCTCTTT
TGTCATGCCTACAGGACACAAGTTAGAACATGGTGGTGTAATGCATGGGG
GAAATGTAACATCTTCGTCCAATATAGGAMCGTTTAACACACCTGTAACA
TCAGTCCAGCCTGGGTCTGCTGGTGCAGGAATGGGAGCAGCTCTTGTTGC
TACACCTATAATCAGTTTGACAGGGTCTGCAGCACTTATGGGTGGGATGG
GAATGCAAGGTCAAAATCCTAGGTTGTATGACACATCCCATCCTGAGTCA
TTGGCCGGACCTCCACAAACTAATGAACCTATGACACCGCCAGTTATTCA
ACAGCAACCCGCATCTAGTAATAACACAGTTACTCCTGCAACTTTAGTTC
GGCAATCTGAACCCAAATTTCATTTCACGGATATTAACACCAGTAATTTA
AATGGAATTGTACCACATATAAGTATAGATAGTCGATTAACACTACTAAG
AGATCAACCTGACTTAGTTCAGCTAATTAAACTTGCAATTGAAAAATCTA
TTCAAGAATGGGCCTCTCCTGTCATTGATCGGGCCATCAAGATCGCTCTC
ACGACTTGTGAGCAAATAGTAAAAAAAGACTGTGCCCTAGATCATGATGA
AAACAGATTACGCCACTCTGCTCATTACATGGTACGAAATTTAACTGCTG
GCATGGCTATGATTACTTGTAGAGATCATTTACTCCTTTCTATCAAGACT
CATCTGAAGAATTTTATGATTACTCTTGGGCGTAATCTTACTCCTAATCA
AACAGAAGCAATTGAAATGACTGTGTCGGTAATAGCTAACGATAATGTTG
AACTTGCTTGTGCTTTCATTCAAAAGAAAGCGATTGAAAAAGCAATTCCA
GAAATTGATAAGAGACTTAAAGGTGAATACGACAATCGTATCCTAGCTCG
TAAGGAAGGTCGGCGCCATTGGGATGGAGCTGCCTTGGCTTACCAGGCTG
AACGAATGCCTGAAATGATTCGCCTCAAAGTTGGAGCTGTATCACAACAG
CAAAATGCCGTATATGAAGAATTTGCGCATAATATTCCCGGCTTTAAGCC
TTTAACAGACAGAGAAATTTTGGCTATTGCACCAAAACCACTTGTTGATC
CTGGACCAGTCGTTTTGTCATCGTCTAGCAATACAATGGCCCCTTCAGAA
GATTGTATTGCCATTCTTGATGAAGTATTCTCAAAGCTTGAACCATTTGT
TGCAAATTGTACCGGTTTACCTACAACTCCTCATATGGCTAATCTACACG
CACTTGTTCAGAATRTAGCCGTTACTCGTTCTAGCAAGGAGGTAAACACA
ATAAGTCTTTTAATCCACAAGGCTGTTGAAGGCTTATTGGAAGGGCTCAC
ACCGAATCTTCCAGTAGAAACAGAAAATCTTGCGAGATATAGAGATGCGA
ATTTGTTAGTTCTGCGAGCTCTTTCTGATCCACGAGCATTTGGAGCCAAT
TGGACCAGTAGACAAGTAACGTTAGCTCTTATCGAAGCCCGTGAAGAACT
CAAATATAATTTGGATGCTGTTGATATATTAATTAGATCTGGGTTTGTAT
CTCTTCTAGATTATGATAAACATCTGTCCCAAGCGATGCAGGGTGGAGAA
AATGTAATAGCAACAGCTTTTGCCATGCATCTTTGTAAAATTTACTTAAT
AGATGACCGATCTAATGCTCACATAATTGAAAGTGATCTCTTTGGGACAA
TAGAAACCCTTCAAAAAATATCTACCAACTCGCCCAGACCTCCAGATGGA
ATTATCAGCTTAATGGAAATGATTAAGATGTCAAGTGAGAGACTAGAGCA
AAACCTTGCAATGGCAGGTCCTACAGGACAAWTACATTCCGGTATCCAGC
AAGCTCGTGAATTTGGAGACCCCAGGGGCCTTTTGGAAAAAACGGAATTT
TTGTTGCGGGAGTGGGTCAATGCGTACCATTCGAGGGACGCTGGCAAAGA
TTCAAGACAGGCATTTTTTATATTCGTCAAGCGTATGAACGAACACGGAA
TTTTAAAGACAGACGATTTGATTACCAGATTCTTTCGAATGTCTACTCAG
ATGTGTGTAGACCTTTGCTATAGGGCTCTCGCTGAACAGAATAATTCGCC
TACTTTGGTGCGTGCAAAGTGCTTCCACACTTTGGATGCTTATGTCCGCT
TAATCACTCTCCTTGTAAAACATTCTGGAGAGACACAAAATACTGTTACC
AAAGTTAATTTGTTGAATAAAGTTCTAGGAATCGTCGCTGGAGRGCTACT
CATAGACCATGATGTCCGTAATACGGGTTTCCAGCAAGTACCGTATCATC
GAATTTTCATTATGTTGTTTTTGGAATTGAATACTCCAGATCATATCTTG
GCTACCATCAATTTTCAAGTTTTAATGGCTTACAGCAATATGTTGCATCT
GTTAAGACCGGCGAAAGCCCCCGGGTTCGCCTACGCTTGGCTCGAAATTG
TATCGCATCGGGTCTTTATGCAACAAGTTTTAGTTAACAGTCCACAAGCG
AAGAGTTGGCCAATGTATGCACAACTATTGGCAGATCTATTCAAATTCTT
AGCTCCTTTCCTTAGAAACGCCGAGCTAGCAAAGCCTGTCCATCGATTAT
TTAGAGGAACACAACGGGTACTACTCGTGCTTTTACATGATTTCCCTGAT
TTCTTGAGTGATTATCATTATACTTTCTGCGACGTCATACCTCCAAACTG
TATTCAAATGCGAAACCTTATTTTATCAGCTTTTCCACGGAGTATGCGTT
TGCCAGATCCTTTTATGCCTAATTTGAAAGTTGATATGCTTCCTGAAATA
TCAATTGCGCCACGAATGTGTGCTAATTATTCAGCAATGCTAAAACCAAG
TTTTAAGAAAGAGCTGGATTCATATTTGAAAAATAGAGGTCCAGTTTCAT
TTCTCGTTGAAGTGAGGAGTCACTTGGTAATTAATGGAAGTGGTGGMGAG
TCTGGAGGSAATGGCACAAATTGTTCAAACCGGTACAATATTCAAATGAT
CAATGCCCTCGTGATGCACGTAGGAATARCAGCCATTAACTATATCCGGT
CCAAACAATTAGCGCCAAATATGGCTACCATTGCTCATTCATCTCATATG
GATATATTCCAAAACTTGGCTGTGGATCTCGAGACGGAGGGAAGATACTT
GTTTTTAAACTGTATTGCAAACCAGCTACGTTATCCTAACTCTCACACTC
ATTACTTTTCCTGTACCTTATTGTATCTTTTTGCTGAGGCCAATACGCAA
GCAATTCAGGAACAAATTACAAGAGTCCTTCTTGAGAGACTCATTGTTAA
TCGTCCTCACCCATGGGGACTTCTCATTACTTTTATCGAGCTCATCAAAA
ATCCAACCTATAAATTTTGGACCCATGATTTTGTGCATTGCGCCCCAGAG
ATAAGGAAATTATTTGAATCCGTAGCCAGGTCTTGTATGGTTCCCTCCTT
GCCAAGGGACAATGGAGATAACGAATAA back to top
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