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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s97 | supercontig | LSalAtl2s97:2839025..2843929 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012868 >EMLSAP00000012868 ID=EMLSAP00000012868|Name=EMLSAP00000012868|organism=Lepeophtheirus salmonis|type=polypeptide|length=1447bp
MLKHLISLYFILLLVFSDGREVYYHNQFALRIPSGDPYRIGQRHDLNYIG
PILNDYHLFEVHHIHRRSLEPHEDHQFHEDEDITWYEQQIEKNRIKRDND
VERTDTIFQPSDPLFERQWFLNQGAHDGSDMNVVEAWKLGITGKGVVVTI
LDDGIQTNHPDLIDNYDPLASTDINDNDDNPMPQDDGDNKHGTRCAGEVA
AIAFNDYCGVGVAYNASIGGVRMLDGVVNDAVEARALSLRPNHIHIYSAS
WGPEDDGKTVDGPGRLTKEAFISGILKGRSGRGSIFVWASGNGGRRDDNC
NCDGYTNSIYTLSISSATQGGYKPWYLEECSSTLASTYSSGTPSHDASIT
TVDQDGESGWYVNGVGKHYSHKFGYGLMDAGTMVKSALNWKLVGPQMVYK
SEKIYPNKTLRKESLGEVVYAFIYIKESNKLMNHLEHVQAVISITGSPRG
SLELVLISPSGTRSILLMKRSKDTRDGSFEDWPFLSVHFWGETPTGKWTL
EVIRHEDIQPENNNRKDGVLKDWQLIFYGVEGNPLRDNVRANNSNLGEQV
ESYDEYEGLSNDTVGVEVSTSDCDNSEKCLKCKSFIFNNNCVENCPNKTF
PAQGYCKPCHFKCNTCYGPQLNQCLTCTVPYLFLPESSSCHKVCPXSHFL
EKDYNICLPCFNFKNCLQCHQTTGNCILCNTGFFVTPESYCSPYCPSGFY
SDSKENQCSTCHTVCEECFGPKQSQCISCKDGKFYHERTCLEKCPSSHYE
NKDLKECTPCSKGCLECPLHPRKCQKCEENWILLGNKCFPAIPNKKTSCP
MGSYYDLKKLECSSCHYQCQNCFGRGPDHCITCNKDNPFHHISSCLHTCP
SYFTYPEGLQCNHCPHSCRSCTGAKQCNLCNSGSVLTSDGRCVAKCPQGY
FPSIESLKCEPCHRNCKSCIGIKENECISCVDSFVHAPDGSCRSTCPDGF
FLQEGECRPCHGRCKTCFGQENDNCLSCFKGLLFEGSTCWACKSGEYYDD
IAAKCLKCHLSCRQCFGDLANECLSCNNHRAFNKWNNTCEKCCMTDENDC
CECNKSKTICVNPNLNNSRKRSSYTIGRSYQLNNNQMKRNESGIFYIFTA
STILFVVLVYFIRRNRYKCRSRFYNHYQGYTKVAYDNISDHVYLSNESNE
NRFIRPALYDFNQRQEKINKSKKLLNESEYSRRALFSDWNYDVELFALGA
RLRESFNFELVREALRDPTFYLVSMKEKIDLSLKDSEASNTRLVELGREV
ISASLNDFLTKTFPKVPSDGIIAFQEYLMSPYVLASKALHIGLKDLVVSQ
EYPPSKNTLSNAFCALIGAHSESGNNRRQSYQLVVDLVATQIIGMDLHDV
WKIQNPMDYLSKILAENNMKEPEPRLQWASGKNTLLASYHVGIYSNQSLI
GECTGESIETARDMAXLDTLRRXFDTDLSKRDIFFHSNHVEPSSLES back to topmRNA from alignment at LSalAtl2s97:2839025..2843929- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012868-708715 ID=EMLSAT00000012868-708715|Name=EMLSAT00000012868|organism=Lepeophtheirus salmonis|type=mRNA|length=4905bp|location=Sequence derived from alignment at LSalAtl2s97:2839025..2843929- (Lepeophtheirus salmonis)
ATGCTGAAACATCTTATTTCCTTATACTTTATTCTACTACTTGTATTCTC
AGATGGGAGGGAAGTATATTATCATAATCAATTTGCTTTACGTATTCCTT
CTGGTGATCCATATCGAATCGGTCAGAGACACGACCTAAACTACATTGGA
CCTATTTTAAATGACTATCATTTATTTGAGGTTCATCATATTCATAGAAG
ATCTTTAGAACCACATGAGGATCATCAGTTCCATGAAGATGAGGACATTA
CGTGGTATGAACAACAAATTGAAAAAAATAGGATTAAGAGAGATAATGAT
GTAGAAAGGACAGACACTATTTTTCAACCCTCGGATCCACTTTTTGAGAG
ACAATGGTTTCTCAATCAAGGTGCTCATGATGGAAGTGACATGAATGTCG
TTGAGGCATGGAAGCTGGGTATAACGGGAAAAGGTGTTGTTGTAACAATT
TTAGATGATGGTATACAAACCAATCACCCAGATTTAATAGATAATTATGA
TCCTTTGGCTTCTACGGATATTAATGACAATGATGATAATCCTATGCCTC
AGGACGATGGAGACAATAAGCATGGTACAAGATGTGCTGGCGAAGTTGCA
GCCATTGCATTCAACGACTATTGTGGTGTAGGAGTGGCTTATAATGCGTC
GATAGGAGGCGTGAGAATGCTCGATGGAGTCGTAAATGATGCTGTTGAGG
CTAGGGCTCTCAGTTTAAGACCAAATCATATCCATATTTACTCTGCTTCT
TGGGGCCCAGAAGATGATGGTAAAACTGTGGATGGGCCTGGTCGCTTAAC
AAAAGAAGCTTTCATTAGTGGAATCTTAAAAGGTCGATCAGGAAGAGGCT
CAATTTTTGTGTGGGCTTCAGGAAATGGTGGTAGGAGAGATGATAACTGT
AATTGCGATGGTTACACAAACTCTATTTATACACTGTCCATAAGTTCTGC
TACTCAAGGAGGCTATAAACCCTGGTATTTAGAAGAATGCTCTTCGACTC
TTGCTTCAACATATTCTAGTGGAACACCAAGTCATGATGCCAGCATTACA
ACTGTGGACCAAGATGGTAAATTAAGACCTGACCGATTGTGCMCATCTTC
TCATACAGGTAMATCCGCATCGGCTCCTATTGCAGCTGGAGTATGTGCAC
TAGTTCTTGAAGCAAATACGAATTTAACTTGGAGAGACTTGCAATATTTG
GTTGTTGCATCATCAAATCCATTNNNNNNNNNNNNCCTTTAATAGGTGAG
TCAGGATGGTATGTGAATGGAGTGGGAAAACACTATAGTCATAAGTTTGG
TTATGGTCTAATGGATGCAGGNACTATGGTCAAATCAGCATTGAATTGGA
AATTAGTTGGACCTCAAATGGTTTATAAATCCGAAAAAATATACCCTAAT
AAAACACTACGGAAAGAGTCACTTGGGGAAGTTGTTTATGCTTTCATTTA
TATCAAAGAGTCAAACAAACTTATGAATCACTTGGAACATGTGCAAGCAG
TTATTAGTATAACTGGAAGTCCTAGAGGATCTTTGGAACTTGTGTTAATA
TCTCCTTCTGGAACGAGATCTATTCTTTTAATGAAGAGGTCAAAAGACAC
AAGAGACGGTTCTTTTGAAGATTGGCCCTTTTTATCTGTCCATTTTTGGG
GCGAAACTCCTACTGGAAAATGGACTCTGGAGGTCATTCGTCATGAAGAT
ATTCAGCCTGAGAATAATAATAGAAAAGATGGAGTACTTAAGGATTGGCA
ACTCATATTTTACGGGGTTGAGGGCAATCCTTTGCGTGATAATGTGAGAG
CTAATAATAGCAATTTAGGAGAGCAAGTCGAGTCATATGATGAATATGAA
GGCTTGTCAAATGACACGGTAGGTGTAGAAGTGTCAACATCAGATTGTGA
TAACTCAGAAAAATGTTTAAAGTGTAAAAGCTTTATTTTTAATAACAATT
GTGTTGAAAATTGTCCGAACAAAACATTTCCTGCTCAAGGATATTGTAAA
CCCTGTCATTTCAAATGTAATACATGTTATGGACCTCAATTGAACCAGTG
TTTGACATGTACTGTTCCGTATCTGTTTCTACCAGAAAGTTCTTCGTGTC
ATAAAGTCTGTCCTRCCAGCCACTTCTTAGAAAAAGACTACAACATTTGC
CTACCATGTTTCAACTTCAAAAATTGTCTTCAATGCCATCAAACAACAGG
AAATTGCATTTTGTGCAATACTGGTTTTTTTGTCACTCCTGAATCATATT
GTTCTCCTTACTGCCCATCAGGTTTTTATTCTGATTCTAAAGAAAACCAG
TGTTCAACTTGCCACACTGTTTGTGAGGAATGTTTTGGTCCTAAACAAAG
CCAGTGTATCAGTTGTAAAGATGGGAAATTTTATCACGAGAGGACWTGTC
TTGAAAAATGTCCCTCCAGCCACTATGAAAATAAAGATCTTAAGGAGTGT
ACTCCTTGTTCGAAAGGTTGTTTAGAATGTCCTTTACATCCAAGAAAGTG
TCAAAAATGCGAAGAAAATTGGATCTTACTTGGKAATAAATGTTTTCCTG
CCATACCTAATAAAAAAACGTCCTGTCCCATGGGAAGCTATTATGATTTG
AAAAAGCTAGAATGTTCTTCTTGTCATTATCAATGTCAAAATTGTTTTGG
TCGTGGTCCTGATCACTGTATAACATGCAATAAGGATAATCCTTTTCATC
ATATTTCTTCTTGTCTACATACGTGTCCTTCTTACTTTACTTATCCAGAA
GGCCTTCAATGCAATCACTGTCCCCACTCATGTCGATCATGCACTGGAGC
TAAGCAATGTAATCTATGCAATTCAGGAAGTGTTCTTACGTCAGATGGAA
GATGTGTTGCAAAATGCCCTCAAGGGTATTTTCCATCAATTGAATCCCTC
AAATGTGAGCCTTGTCATAGAAATTGTAAATCTTGTATTGGAATCAAGGA
AAATGAGTGTATTTCATGTGTGGATTCCTTTGTTCACGCCCCTGATGGTT
CTTGCCGGTCAACCTGTCCTGATGGGTTCTTCTTGCAAGAGGGAGAATGT
CGCCCTTGTCATGGTCGTTGTAAAACCTGCTTTGGCCAAGAAAATGATAA
TTGTTTGTCATGTTTCAAGGGGCTTTTATTTGAAGGTAGTACATGCTGGG
CCTGCAAATCTGGAGAATATTATGATGATATAGCTGCAAAATGTCTTAAA
TGTCATTTGTCGTGCAGACAATGCTTTGGCGACTTGGCTAATGAATGTCT
TTCTTGCAATAACCATAGAGCTTTTAATAAGTGGAATAATACCTGTGAAA
AATGTTGCATGACTGATGAAAATGATTGCTGCGAATGTAATAAATCCAAG
ACTATATGCGTCAACCCTAATTTGAACAATAGTCGGAAGCGAAGTTCATA
CACCATTGGGAGATCATATCAACTTAACAATAACCAAATGAAGAGAAATG
AATCTGGAATATTTTATATATTTACAGCTTCAACGATTTTATTTGTTGTC
CTTGTATATTTTATTAGAAGAAATCGATATAAATGTCGAAGTAGATTTTA
TAATCATTACCAAGGCTATACAAAAGTTGCATACGACAATATTTCAGATC
ATGTGTACCTGAGTAATGAAAGCAATGAGTATGAAAGTGATGATGATAAT
TTAGTTTTCATGAATTAATATGACTGTGATAGTCGAATGATTATATTTAA
ATTTAAGTCATAAAAAGATATATATTTATATATTGTACTTTTAGTTATTT
TCATTGTATTTCATATACCTACATGAATAGATGTGTTCATCAAATACAGT
GTCCCAATATACATAGTGTGGTCAATCAAAAAATGTTATTATTTATTATT
CTTTACTTTTAAGTCATTTTGCCTGTGCGAAATTATAGGAACAGATTTAT
TCGACCAGCCCTGTACGACTTCAATCAGCGGCAAGAGAAAATCAATAAAT
CCAAGAAATTATTAAATGAATCAGAATATTCAAGAAGAGCATTATTCTCT
GATTGGAATTATGATGTAGAGTTGTTTGCTCTCGGGGCACGACTACGAGA
AAGTTTTAACTTTGAGCTAGTTAGAGAAGCTTTGAGAGATCCTACGTTTT
ACTTGGTTTCAATGAAGGAAAAAATTGATTTAAGTTTAAAAGACTCTGAG
GCGTCAAATACAAGACTCGTAGAATTGGGAAGGGAAGTAATATCTGCATC
ACTAAATGATTTTTTGACTAAAACATTCCCTAAAGTACCATCAGACGGAA
TTATTGCCTTCCAAGAGTACCTAATGTCACCATATGTATTAGCTTCTAAA
GCGTTACACATCGGACTCAAGGACCTGGTGGTGTCTCAAGTTAGTATTGT
GGATTATTCAAAATTACTAATAATTATTTTTTCCCCTGGTAACTGTTCAT
AGGAATATCCACCAAGCAAAAATACTTTGTCAAACGCTTTCTGTGCTCTT
ATCGGAGCTCATAGTGAGAGTGGGAATAATCGAAGACAATCGTATCAACT
TGTGGTAGATTTAGTTGCAACTCAAATCATTGGAATGGATTTACATGATG
TTTGGAAAATTCAAAATCCGATGGATTACTTATCGAAAATACTCGCTGAA
AATAATATGAAAGAACCAGAACCCAGACTTCAATGGGCTAGTGGTAAAAA
TACACTTTTGGCGTCATATCACGTAGGGATATATTCCAATCAAAGTTTAA
TTGGAGAATGTGAGTAACTCACTCAAGTATTATATTTTTTTACACGTATA
TTTAATGTTTTTTTTAAGGTACTGGTGAATCCATTGAGACTGCAAGGGAT
ATGGCAGSACTTGATACGCTTAGAAGAAWGTTTGATACTGATTTATCAAA
AAGGGATATTTTCTTTCATTCAAATCATGTTGAACCATCGTCGTTAGAAT
CATAA back to top
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