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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s97 | supercontig | LSalAtl2s97:2856074..2862588 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012870 >EMLSAP00000012870 ID=EMLSAP00000012870|Name=EMLSAP00000012870|organism=Lepeophtheirus salmonis|type=polypeptide|length=1905bp
MPGHDKKGKPGEPDPDPEPYLVISMEMKREDMLKPYDPKKSVWAPDGNGG
FKEGLLVSDEDGKALVMIGHEKKTFKSEAVGQINPPKFEKCEDMANLTYL
NDGSVFHNLEARFKAKLIYTYSGLFCIVVNPYKRYPIYTPRVVKMYLGKR
RNEVPPHLWAITETAYRNMLQNSKDQSMLITGESGAGKTENTKKVISYLA
MVASSGKKSQKKVSLEDQIVAXNPILXSYGNAKTSRNDNSSRFGKFIRIH
FTPNGKLAGCDIESYLLEKSRITQQQSVERSYHIFYQLLQPFVADMKSKC
CLSDDIYXYQYVSQGKVSVPSIDDNEELEFTDQAFDIIGFTENEKWDCYK
ITAAVMSFGEVKFKQKGRDDQAEPDDLTYPNKVGELLGVNPDELMKSFCK
PKIKVGTEWVTKGQTCEQATNGVGGIARGCFDRLFKWLIIKCNDTLIDPT
MKKSHFVAVLDIAGFEIFEYNGFEQISINFVNEKLQQFFNHHMFVVEQEE
YVSEGIDWAMVDFGMDLAAAIIMFEKPMGIWAILEEESLFPKATDKSFEE
KLKAQHLGKSAPFAKPQSKTDKNAHFAIIHYAGIVSYNVTAWLEKNKDPV
NDTVVDVLKRASNELLVFLWREHPGQSNPPDDKGKKKKKGGGGKTVSSVY
LVQLTDLMNTLHCTEPHFIRCIVPNTHKKPLEVEPPLIMHQLTCNGVLEG
IRICMRGFPNRMLYPDYKSRYQILGAQEIATAKDNKTGVYALMDKISFPR
EKYRLGHTKVFFRAGALAQLEEDRDLIVLKLVRWIQGQFHGFIRRKDYKK
RFDQRELLKVIQRNFKKYMSLRNWGWFIIIQKTRPLIGQLNMEEELKKLE
EQXNEAYGAYTEALSVTKELEESNSTIKADINGLSKQLESEQGNLSQYQD
RQIKANTLKAEIETELVKKQXLLAQEEVARQEMEVNRKKMMGDAQVLKKD
IEDIEIVIQKVEQEKSNRDHTIRSLNEEVAESDELINKINKEKKHIGDNQ
SKAVEDLQGTEDKXNHLTSIKSKLETTLDELEDSVEREKRQKCEVEKIKR
KLESELRMTQESVNDLDQQKKELEGTILRKESEASKLASKLEDEQSLVSK
TQKQIKELQGRVEEYEEELEAERQARAKAERQRSDLAREIDELGERYDEA
GSATHAQTELNKKRESEIHKLRRDVEEANIQQESLLSNLKKKHQDAIQEM
MEQIEQLSKMKSKIEKDKVKIQHEIADARAATDEIIRARSSSEKSNKNLT
GQLNELNKKLEEXNLTLGDFESAKRKLAAENSDLLRVVGDIGNNVNMLQK
MKASLQSNLEEAKHIADHESHERFILVGKFKNLEHELDGMREQLEEEVCA
RNDLTRQISKCEGEVNLWRSKYETEAVAKSQELEMSKMKLTSRLTEAEST
IENLNSKLQQIDKSRQKLQEEYDEMSYNFDQAQILHNQMEKKARQFDKIV
NEWKLKVDGLSMDLDVSQKDCRNTSSELFRIKILWTKSXEGGRSIHEIDK
IRKRLEAEKLELQAALEEAEGALEQEENKVLRSQLELTQVRQEIERRIQE
KDEEFEGIKKNQGKAVEGMQMALENESKGKAEALRMKKKLESDVTELEMS
LEHANANNIETQKSIKKYQQQIRESQAKLEEEQRAKDMARDEQVISERRS
HTLQNSLEEARTLLEQADRNRRTLEQELSDSNEVLSEYTVQNQAIVAAKR
KLENELQNLQADLDEMNAEAHLSDEKASKAMIDAARLADELRNEQEHASK
LERDRKLIESQSKDIHMKLDEAENASLKNGKKAMNKMETRIRELESELDA
ESRRMADAQKNLRKSERRIKELTFASDEDRKNHERMQSLVDQLQSRIKSY
KKQIEEAEEIAALNLAKFRQTQSLLSSAEGRADLSEQALAKTRARARSAS
IGPNY back to topmRNA from alignment at LSalAtl2s97:2856074..2862588- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012870-708717 ID=EMLSAT00000012870-708717|Name=EMLSAT00000012870|organism=Lepeophtheirus salmonis|type=mRNA|length=6515bp|location=Sequence derived from alignment at LSalAtl2s97:2856074..2862588- (Lepeophtheirus salmonis)
TCAATCATGCCCGGACACGATAAGAAAGGAAAACCTGGTGAGCCAGATCC
AGATCCAGAGCCATATTTGGTTATTTCCATGGAGATGAAACGTGAAGACA
TGTTGAAGCCCTATGATCCAAAGAAATCCGTTTGGGCTCCAGATGGCAAC
GGTGGATTCAAGGAGGGTTTGCTCGTCTCTGATGAAGATGGAAAGGCTCT
TGTGATGATTGGTCACGAGGTAAACAAAAATTGTCTTATTTAGGAGTCAC
TTGGAGATTTTGTACTAAGGGCATACAAAAAGTTAATAACGTTTCGTTAG
TAGTTGTAAATTGAGTTGATACAACTCTGTTTGAAAATTATTTTAATTCG
AAATCAAGGCGATTCAATTAATAATTGCTTTTAAAATGTTGTTCATTTTT
TGTATGCTCTGGCAGAATATGTTGACATTAAAATCCGATCGATATGTTGT
CTTCAAGTTAGTTGGTACAGAATCATATTTCATATAATTATTATTATTAT
CAGCCGACTTATGGGCATATATTTAAGGTTAAGAAGACGAACATAAAATA
ATTTTAATTTTTGGGAAAGAAAAAGAACTTTCAAAAGACAAAATTTGATT
TGTCGTAAGATACTCTCATTTTTTTAAGTATATAAAGTTAACAAGCAAAA
TATTATATCCATCGGTCTCTAATTGCATGCTCCACGTACAGTTTTTGTAA
GTGGGGGGGGGGGGGGCAATAACAAAAACAAAATTTGCTGATATATGATA
ACTGTAAATTCTAAAAAAAGTGGAGAGGTTATACCCCCTCTATTATCCTG
ATATAAATGTACAAATATTGATGGCATCCTAAAATAGTTTTAATTATTAC
TTCTAGAAAAAAACCTTTAAATCCGAAGCTGTTGGTCAAATTAATCCTCC
CAAATTTGAAAAATGTGAGGATATGGCTAATTTGACTTACCTTAATGATG
GTTCAGTCTTCCACAATTTGGAGGCTCGTTTCAAAGCTAAGCTCATTTAC
ACCTACTCTGGTCTCTTTTGTATTGTTGTTAATCCCTACAAAAGATATCC
CATTTACACTCCTCGTGTGGTCAAGATGTACTTAGGCAAAAGAAGAAACG
AAGTACCTCCCCATTTGTGGGCCATTACTGAAACTGCCTACCGTAACATG
TTACAAAATAGCAAAGATCAATCCATGCTGATCACTGGGGAATCCGGAGC
AGGAAAGACTGAGAATACCAAGAAAGTAATTTCCTATCTTGCTATGGTTG
CTTCATCTGGCAAAAAATCACAAAAGAAAGTATCTCTAGAGGATCAAATT
GTGGCTAMTAATCCTATTCTTKAGTCCTATGGAAATGCCAAAACTTCAAG
AAATGACAATTCCTCTCGTTTTGGTAAATTCATTCGTATTCATTTCACTC
CCAACGGTAAATTGGCTGGTTGTGATATTGAGTCTTATCTCCTTGAAAAG
TCTCGTATTACTCAACAGCAATCAGTTGAGCGATCCTACCACATCTTTTA
TCAACTCTTGCAACCCTTCGTAGCGGATATGAAATCCAAATGCTGCCTCA
GCGATGATATCTATGMCTACCAATATGTATCACAAGGAAAAGTATCCGTG
CCCTCCATTGATGACAATGAAGAATTGGAATTCACAGATCAAGCTTTCGA
TATTATCGGCTTTACTGAAAATGAAAAATGGGATTGCTACAAGATCACCG
CTGCTGTTATGTCCTTTGGTGAAGTTAAGTTTAAGCAAAAGGGTCGTGAT
GACCAAGCTGAACCTGATGATCTCACTTACCCTAACAAAGTTGGAGAACT
TCTTGGTGTTAATCCTGATGAACTAATGAAATCTTTCTGTAAGCCAAAGA
TAAAGGTCGGAACTGAATGGGTAACCAAGGGTCAAACTTGTGAACAGGCT
ACCAATGGAGTTGGTGGKATTGCAAGAGGTTGTTTTGATAGGCTATTCAA
ATGGCTAATTATCAAGTGTAACGATACTCTAATTGATCCTACCATGAAGA
AGTCCCACTTTGTAGCTGTCTTAGATATTGCTGGCTTTGAAATTTTTGAG
TACAATGGCTTTGAACAAATCTCCATTAATTTTGTCAATGAGAAACTTCA
ACAGTTTTTTAATCATCACATGTTTGTCGTTGAGCAAGAAGAATATGTTT
CTGAGGGTATCGATTGGGCGATGGTTGATTTTGGTATGGATTTAGCTGCT
GCTATTATTATGTTTGAAAAACCAATGGGTATATGGGCTATTCTAGAGGA
AGAATCTCTTTTCCCTAAGGCAACTGACAAGTCCTTTGAAGAAAAATTAA
AGGCTCAGCACTTGGGCAAATCTGCTCCATTTGCAAAGCCTCAATCAAAA
ACTGATAAGAATGCTCATTTCGCTATCATTCATTATGCTGGTATTGTGTC
TTACAATGTTACAGCGTGGTTAGAAAAGAATAAGGATCCTGTGAATGACA
CAGTTGTTGATGTCCTCAAACGTGCCAGCAATGAGCTTCTCGTCTTCTTA
TGGAGAGAGCATCCGGGACAGTCTAATCCACCAGATGATAAGGGCAAGAA
GAAGAAGAAGGGTGGTGGTGGCAAAACTGTATCCTCAGTCTATTTGGTAC
AGCTCACTGATCTCATGAATACCCTTCATTGCACTGAGCCTCACTTTATT
CGTTGTATTGTACCCAACACACATAAAAAGCCTCTTGAAGTAGAACCTCC
TTTGATCATGCATCAGTTAACCTGTAATGGTGTACTTGAAGGAATCAGGA
TTTGTATGAGAGGATTCCCAAACAGAATGTTATACCCAGATTATAAGTCC
AGATATCAAATTCTTGGAGCACAAGAAATAGCCACTGCAAAGGACAACAA
AACTGGGGTCTATGCTCTCATGGACAAAATTAGTTTTCCAAGAGAAAAGT
ACAGACTTGGACATACAAAGGTCTTCTTCAGAGCTGGTGCCCTTGCTCAG
CTAGAAGAAGATCGGGATTTGATTGTTTTGAAACTCGTGCGATGGATACA
AGGTCAATTTCATGGTTTTATCAGGAGAAAAGATTACAAAAAACGATTCG
ATCAAAGAGAGCTCCTCAAAGTTATCCAAAGAAACTTCAAAAAATATATG
AGCTTGAGAAATTGGGGATGGTTCATCATCATTCAAAAGACTCGTCCTCT
TATTGGTCAATTAAATATGGAAGAAGAACTAAAGAAATTGGAGGAACAGG
MGAATGAGGCATATGGAGCTTACACTGAGGCTTTGAGTGTGACAAAGGAG
CTTGAAGAGTCCAATTCCACTATCAAGGCTGATATTAATGGTTTGTCTAA
ACAGCTTGAGTCAGAGCAGGGTAATTTGAGTCAATACCAAGATCGTCAAA
TCAAGGCCAATACTCTTAAAGCAGAGATTGAGACTGAATTAGTTAAAAAA
CAAGMCCTCCTCGCCCAAGAAGAAGTTGCCCGCCAAGAAATGGAAGTTAA
TAGGAAGAAAATGATGGGAGATGCTCAAGTTTTGAAAAAGGATATTGAAG
ACATTGAGATCGTGATTCAAAAAGTGGAGCAAGAAAAAAGTAACAGGGAT
CACACCATACGAAGTTTGAATGAAGAGGTAGCTGAGAGTGATGAGCTTAT
CAATAAAATCAACAAGGAAAAAAAGCACATTGGTGATAATCAATCTAAGG
CTGTTGAAGATTTGCAAGGGACAGAAGATAAGGWCAACCATTTGACATCA
ATCAAGTCTAAATTAGAGACAACCCTTGATGAACTAGAAGATTCGGTTGA
GAGAGAAAAACGCCAAAAGTGTGAGGTCGAAAAAATTAAGAGAAAATTAG
AGAGTGAACTACGTATGACTCAGGAATCTGTGAATGATTTGGATCAACAA
AAGAAGGAACTTGAGGGTACCATCTTAAGAAAAGAAAGTGAAGCTTCAAA
ACTGGCTTCTAAGTTGGAAGATGAACAGAGTCTTGTTTCCAAAACTCAAA
AGCAAATAAAGGAATTGCAAGGTAGAGTGGAAGAATATGAGGAGGAGCTT
GAAGCTGAAAGACAGGCTCGTGCTAAAGCCGAGAGACAGAGATCCGATCT
TGCTCGTGAGATTGATGAATTGGGAGAGCGTTATGACGAAGCGGGAAGTG
CAACCCATGCTCAAACAGAATTAAACAAGAAGAGAGAAAGTGAAATCCAC
AAATTAAGACGTGACGTTGAAGAAGCAAATATTCAACAAGAGTCCCTCCT
CTCAAACTTGAAGAAAAAACATCAAGATGCCATTCAAGAAATGATGGAAC
AGATTGAACAACTATCAAAAATGAAATCGAAAATCGAGAAAGATAAGGTT
AAGATCCAGCATGAAATTGCTGACGCCCGAGCTGCAACAGATGAAATTAT
TCGTGCAAGGTCATCTTCAGAAAAGTCAAATAAAAACTTAACAGGTCAAT
TGAATGAATTGAACAAAAAGCTGGAGGAAKCCAATTTGACTCTTGGAGAT
TTCGAATCAGCCAAGAGGAAACTTGCAGCTGAGAACTCTGATCTTTTGAG
AGTGGTTGGGGACATTGGAAACAATGTCAACATGCTCCAAAAGATGAAAG
CATCATTGCAATCCAACCTCGAAGAAGCCAAGCATATAGCTGATCACGAA
TCTCATGAAAGATTTATTCTTGTTGGTAAATTCAAAAATCTTGAACATGA
ACTTGATGGAATGAGAGAACAATTAGAGGAGGAAGTTTGTGCAAGAAACG
ATCTAACCAGACAGATTAGCAAATGTGAAGGAGAGGTCAATCTCTGGAGA
AGCAAATATGAAACTGAAGCCGTTGCAAAATCTCAAGAGTTGGAGATGTC
AAAGATGAAATTAACTTCCCGCCTTACAGAAGCAGAGAGCACCATTGAGA
ACTTGAATAGTAAGCTTCAACAAATAGATAAGTCTAGACAAAAGTTACAA
GAAGAATATGATGAAATGTCTTACAATTTTGATCAAGCTCAAATTCTTCA
CAATCAAATGGAGAAAAAAGCCCGACAATTTGATAAGATTGTTAATGAAT
GGAAACTTAAGGTTGATGGTCTCTCGATGGACTTGGATGTGAGCCAAAAG
GATTGTAGAAATACATCATCTGAGCTATTTAGAATCAAGTCGGCATATGA
TGAATATATTCAACAGCTTGATGAAGTTCGCAGAGAGAATAAGCACTTGA
GTAACGAAATCAAGGATATTATGGACCAAATCAGNNGAGGGTGGAAGATC
TATCCATGAAATTGACAAAATTAGAAAAAGACTTGAAGCCGAAAAATTGG
AACTGCAAGCAGCCCTTGAAGAAGCTGAGGGTGCCTTGGAACAAGAAGAG
AACAAAGTTCTTCGTTCTCAACTAGAACTTACTCAAGTTCGTCAAGAAAT
AGAAAGAAGGATTCAAGAAAAGGATGAAGAATTTGAAGGAATTAAAAAGA
ACCAAGGCAAAGCTGTTGAAGGAATGCAAATGGCTCTTGAAAATGAGAGT
AAAGGAAAAGCTGAAGCCTTGAGAATGAAGAAAAAATTAGAATCCGATGT
TACAGAGTTGGAGATGTCTTTAGAACATGCCAACGCAAATAACATTGAAA
CACAAAAATCTATCAAGAAATACCAACAGCAAATCCGTGAATCCCAAGCA
AAGTTGGAAGAGGAGCAACGTGCAAAGGACATGGCTAGAGATGAGCAAGT
TATATCTGAAAGGCGAAGTCATACCCTTCAAAACAGCTTGGAAGAAGCTC
GTACTCTATTAGAACAAGCTGACAGAAATAGACGAACCTTGGAACAAGAA
TTATCTGATTCTAACGAGGTATTGAGCGAGTACACTGTTCAAAATCAAGC
TATCGTTGCAGCAAAAAGGAAGCTTGAAAATGAACTGCAGAATCTCCAGG
TATGTTAAAAAATATATAGCTATATACCTATGTATATTTTTCTAGAATCA
TTTAATTAAATTTTTTTAATACAATAGGCGGATCTCGATGAAATGAATGC
TGAGGCTCATCTTTCCGATGAAAAGGCTTCAAAGGCAATGATTGATGCCG
CTCGTCTTGCTGATGAACTCCGAAATGAACAAGAACACGCCTCAAAATTG
GAAAGAGACAGAAAATTGATAGAAAGTCAGAGTAAGGACATCCATATGAA
ACTTGATGAAGCAGAAAACGCTTCTCTAAAGAATGGTAAGAAGGCTATGA
ACAAAATGGAGACAAGAATTAGGGAACTTGAATCTGAGCTTGATGCTGAA
TCCCGTAGAATGGCTGATGCTCAAAAGAACTTGCGTAAATCTGAGAGAAG
AATTAAGGAGCTTACCTTTGCATCTGATGAAGACCGTAAGAATCATGAGC
GAATGCAGAGCCTTGTTGACCAATTGCAATCAAGAATCAAATCCTACAAG
AAACAAATAGAAGAAGCTGAAGAAATTGCTGCTTTGAACTTGGCCAAGTT
CAGACAAACACAATCACTATTGAGTTCAGCTGAAGGAAGGGCGGATCTGA
GTGAGCAAGCTCTCGCTAAGACCAGAGCTAGAGCACGTAGTGCCTCTATT
GGACCTAATTATTAA back to top
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