EMLSAT00000012871, EMLSAT00000012871-708718 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012871
Unique NameEMLSAT00000012871-708718
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:2895733..2896356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012871 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012871EMLSAG00000012871-695637Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057790EMLSAE00000057790-766718Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780983auto780983Lepeophtheirus salmonispolypeptide
EMLSAP00000012871EMLSAP00000012871Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012871

>EMLSAP00000012871 ID=EMLSAP00000012871|Name=EMLSAP00000012871|organism=Lepeophtheirus salmonis|type=polypeptide|length=207bp
MALNFSISSILNNSSSSRSAVNNPVKTEIITSDNSSSFPEGHSSNLSPPA
SCSYQTFLTALNWQAYGYLSNFAVQAAVANSNQESGSQETSPNSSFHXLP
QMSPPQXPLSQSNNGQPQQPVIMPPHWSQKQQGHETGVLRRRYTTEQTNV
LMEKYKKSRYVPRQEMAVLASATGLTMLQVKIWFQNRRLKDRKKMQKSRS
QSPELEV
back to top

mRNA from alignment at LSalAtl2s97:2895733..2896356-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012871-708718 ID=EMLSAT00000012871-708718|Name=EMLSAT00000012871|organism=Lepeophtheirus salmonis|type=mRNA|length=624bp|location=Sequence derived from alignment at LSalAtl2s97:2895733..2896356- (Lepeophtheirus salmonis)
ATGGCACTCAACTTCTCCATATCCAGCATACTTAATAACTCATCTTCCTC
CAGAAGTGCTGTTAATAATCCAGTGAAAACGGAAATTATAACCAGTGATA
ATTCTTCATCATTCCCTGAGGGGCACTCCTCAAACCTTTCACCTCCAGCA
TCCTGCTCATATCAAACTTTTTTAACAGCACTTAACTGGCAAGCATATGG
ATATCTAAGCAATTTTGCAGTACAAGCGGCGGTTGCAAATTCAAATCAAG
AATCAGGAAGTCAAGAGACCTCTCCAAATTCATCATTTCACKCTCTTCCG
CAAATGAGCCCTCCCCAAKCRCCTCTCAGCCAATCAAACAACGGTCAACC
ACAACAACCTGTCATCATGCCGCCTCATTGGTCACAAAAGCAACAAGGAC
ACGAGACAGGAGTCCTTCGAAGACGCTATACCACGGAACAAACAAATGTA
CTCATGGAGAAATACAAGAAATCACGCTATGTGCCACGACAGGAAATGGC
CGTATTGGCCTCTGCTACGGGACTGACCATGTTACAAGTTAAAATTTGGT
TTCAAAATCGAAGACTCAAGGATAGAAAGAAAATGCAAAAGAGCCGATCT
CAATCACCTGAATTGGAAGTCTAA
back to top
Add to Basket