EMLSAT00000012879, EMLSAT00000012879-708726 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012879
Unique NameEMLSAT00000012879-708726
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:47615..49895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012879 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012879EMLSAG00000012879-695645Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057815EMLSAE00000057815-766743Lepeophtheirus salmonisexon
EMLSAE00000057816EMLSAE00000057816-766744Lepeophtheirus salmonisexon
EMLSAE00000057817EMLSAE00000057817-766745Lepeophtheirus salmonisexon
EMLSAE00000057818EMLSAE00000057818-766746Lepeophtheirus salmonisexon
EMLSAE00000057819EMLSAE00000057819-766747Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770574auto770574Lepeophtheirus salmonispolypeptide
EMLSAP00000012879EMLSAP00000012879Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012879

>EMLSAP00000012879 ID=EMLSAP00000012879|Name=EMLSAP00000012879|organism=Lepeophtheirus salmonis|type=polypeptide|length=631bp
MPLNILRHVNKRLKIRRNSRLIPSLFLCGTWMIFLFHGAEIKPSHSSASE
TDFLVRSWHLKDPHHGDVPFFNKEKWRDLSGIELVLSRSGIYAIGGSRLG
DDGKPVSISDQSLKKLAAKKKSTYQLNVVVSELIPLNRTLPEVRNIRCLS
KSYPSLLPTISIIIVFHNEASSTILRXAVSAIDRSPKGVVKEIIFVDDAS
TNEDLGSKFQDRISNLNVKCKIIRQKNREGLITARIRGAEAAAASVLFFM
DAHMELSPGWAEPLLAEILKDRTKIVAPVIDDIDDEDFSYKRVEVDQMRG
GXNWKLRHAWIEPLKYENLDSSDPFPTPTIIENKIITFSGGVFAIDKEFF
FASGSFDPGMKIWGGENIEISLRIWRCGGSLLIVPCSRVGHIYRKKSPHS
VPGGFRGQLETEGINIGRCAHVWLDEYVDFYSYMNTKELKLGDLKKRLLL
KRGCHDMNWYLSHIYPDSPLPTKYKYVGQIKLEASGQCLDGIGLNGEEVG
LRLCHGLGSYQIFILKDSGQIQCDVHCLMPSDKDTKRLIKGPCSFQNQNQ
KWSVKKNGQIIHSLTGKCLTFESTSINIVKTSPKSILNYLADLTKESLME
TVIPGPILSECDFNIDSQIWKMDSPLSWRRK
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mRNA from alignment at LSalAtl2s97:47615..49895-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012879-708726 ID=EMLSAT00000012879-708726|Name=EMLSAT00000012879|organism=Lepeophtheirus salmonis|type=mRNA|length=2281bp|location=Sequence derived from alignment at LSalAtl2s97:47615..49895- (Lepeophtheirus salmonis)
ATGCCCTTAAATATATTGCGTCATGTGAACAAAAGACTGAAAATCAGGCG
AAACTCACGTCTCATCCCTTCTCTTTTTTTATGTGGAACATGGATGATAT
TTCTATTCCATGGTGCAGAAATAAAGCCAAGTCATTCCTCTGCTTCTGAA
ACAGATTTCCTTGTTAGAAGTTGGCATTTAAAAGATCCTCATCATGGGGA
TGTTCCCTTTTTTAATAAAGAAAAGTGGAGGGATCTCTCTGGAATTGAGT
TAGTTCTATCAAGGAGTGGAATATATGCAATCGGTGGTTCTCGATTAGGG
GATGATGGAAAACCAGTTAGTATTTCCGATCAGAGTCTCAAAAAGTTAGC
TGCAAAAAAGAAATCCACCTATCAACTTAATGTTGTAGTGAGTGAATTAA
TACCATTGAACAGAACACTGCCCGAAGTTAGAAATATAAGGTACGTCAAA
TAATGAGTAGGTTTTAGCGATAAGATTCAAGGTGTTTCTGCATATTGTTG
AGTATAATCTTGAGGAAAAATCGTATATGTATATTTTACACTTTTAGGCA
TCATGTATAACAATTGACGTTTTTTCTTTCATTCTAGATGCCTATCAAAA
TCATATCCCTCATTACTTCCAACGATATCCATCATCATTGTATTTCACAA
TGAGGCATCTTCAACAATACTTCGAKCGGCCGTTTCAGCCATTGATCGCT
CCCCCAAAGGAGTAGTCAAAGAAATTATTTTTGTTGATGATGCATCGACA
AATGAGGATCTTGGATCTAAATTCCAAGATAGAATTTCCAATCTGAATGT
AAAGTGCAAAATCATTCGACAAAAAAATAGAGAAGGGCTAATTACTGCTC
GGATAAGAGGTGCTGAGGCTGCAGCAGCTTCTGTTTTGTTCTTTATGGAT
GCACATATGGAACTGTCACCCGGCTGGGCTGAGCCTCTTTTGGCAGAAAT
ACTTAAAGATAGGACTAAAATCGTTGCACCAGTAATAGATGATATTGATG
ATGAAGATTTTTCGTATAAAAGAGTGGAGGTTGATCAGATGAGAGGAGGG
MTCAATTGGAAATTAAGACATGCATGGATTGAACCCCTAAAATATGAAAA
CTTGGACAGCAGTGATCCTTTTCCTACTCCAACTATCATAGGTTACAAAT
ATTAAATAATATGTGTTTTTATCCTACTGTTTAATGAGACTAAAATATCA
TGGAATCTTTGAAAATGTTGTGGGAAATAAGAATGATTCTTAATGACTTT
ATTTACTCACTCCTTAGAGAATAAAATAATTACTTTTTCAGGTGGTGTTT
TTGCCATCGATAAAGAGTTTTTCTTCGCAAGTGGAAGCTTTGACCCTGGA
ATGAAGATTTGGGGAGGMGAAAATATTGAGATATCTTTACGAATATGGCG
ATGTGGGGGATCATTACTCATTGTTCCATGCTCTAGAGTTGGACACATTT
ATCGCAAAAAGAGTCCACATTCTGTACCAGGAGGATTCCGTGGTCAACTT
GAGACGGAAGGAATAAATATCGGAAGGTGCGCTCACGTTTGGCTGGATGA
ATATGTAGACTTTTACTCATATATGAATACCAAAGAATTGAAACTCGGGG
ATTTAAAAAAAAGGCTTTTGTTGAAGAGAGGATGTCATGATATGAATTGG
TACCTCTCACATATTTATCCCGACTCACCCTTACCTACAAAATATAAATA
TGTTGGACAAGTATGAATTTCACCCCCGTAAATCAGTTATTAAAATTCAT
GATTTTCTTTTAAAAGATTAAATTAGAGGCCTCTGGACAATGTTTGGACG
GAATAGGATTGAATGGGGAAGAAGTGGGTCTTAGACTGTGCCATGGACTT
GGAAGTTATCAGGTTTGTTGTCATTTGTATATGTTTTTTATCCAATACAA
TAATCCTTTATCCGACAGATATTCATTTTGAAAGATTCCGGACAAATACA
ATGTGATGTTCACTGTTTAATGCCCTCTGATAAAGATACAAAAAGATTAA
TAAAAGGACCTTGCAGCTTCCAAAATCAAAATCAAAAATGGAGCGTTAAA
AAAAATGGACAAATAATTCATTCCCTTACAGGAAAATGTTTAACATTTGA
GTCTACATCAATTAACATTGTAAAAACCTCACCAAAATCCATATTAAACT
ACCTTGCAGACTTGACTAAGGAGTCTTTGATGGAGACCGTTATACCTGGT
CCCATACTGAGTGAGTGTGATTTTAATATAGACAGTCAAATATGGAAAAT
GGACTCTCCTCTCAGCTGGAGGAGAAAATGA
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