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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s981 | supercontig | LSalAtl2s981:97107..102445 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012914 >EMLSAP00000012914 ID=EMLSAP00000012914|Name=EMLSAP00000012914|organism=Lepeophtheirus salmonis|type=polypeptide|length=403bp
MDRFSMSLFLLCLFHYSLIILGSEEEALTKNQRESRLLPVFQVIRFRNDA
CSGGSKNGTCYTSAECESRGGTNGGSCASGFGVCCTFTSRCSGMSRENCT
YFESVGNEQGSCSLTICKCDESVCQLRLDFQSFMITGPSTLTETIGKTTF
GILSAGGAVEVSDQTQCTTDTFTVTNPGGTTPPLKSVSQYLSIFKVYVDA
SDACNSLVFQFGANAPGVASVQRQWSIKVSQIRNGDISMAPKGCTQYFTG
TKGVVRSYNFQGKTHLARQNQNICVRRERGMCRICWAATGEKDFLLSGKE
EKGFTKGSVCCGYGXDGXKTSGYDCVIIPGAEKKTGKLANSNAFCGRSKG
LVDMTMGDAKTVCSRALPFSIRFVSDKFEFKEEAAKLPNLGFQLAYTQDS
CTA back to topmRNA from alignment at LSalAtl2s981:97107..102445+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012914-708761 ID=EMLSAT00000012914-708761|Name=EMLSAT00000012914|organism=Lepeophtheirus salmonis|type=mRNA|length=5339bp|location=Sequence derived from alignment at LSalAtl2s981:97107..102445+ (Lepeophtheirus salmonis)
ATTTGAACTAAGCTTCAAAGAAGCCTTGGTGATATAAAATATACTATTAA
TTATTATTGATTAACTAATTCATTGCGTAGCTAGCTAGGAGTCATAGTGG
CAGKAATATCCCGCGCTCTTGTAAAAGAWGTAGCTCGCACCTTGAAGCGT
ACTACTCCAACCTGTGACGAATAGGCAATAGCTTCTTCCCCCACCCACTT
ACACTGTAATACTACTATTACTTCAGTCTATTACAATTCTGTAGTCCTTT
GTAATTGTGACTGCCTTTCTTCCCAAGGAAGTGTGACTAAGGAAAGCGGA
TATCCATCCGTTCTTATCAGTCATAATATATTCCTTTATATTTATTTTTG
TTCGACTTTAGTAGATTATCAGTTTGTTTTTGGTGTACTTGAAACTTGAA
AGCCTACACCTACCTTCTTCGTCTGATCTATCATCATGCTTGCCTTAACA
AAACGGGAATCTTTACTGACTATTTTCTCATGCTTAATTGTCCTACTTAC
TCTTTGTGTGCTCCAATCTGATGCAGGTATGCTTATGTTATGTAATTAGT
AATTACTATTATTTTCTGTAAGCTTAAATCGTTTATGCATAAAATACGTC
GTTAATTAATCATTTCAATGTTTTAGGGCCTATCGATGATGTCGAAGACT
ATGTTAATTCGAAGTGTGTATCAAGTAATCAGTGTCATTTCTTTGAATAC
TGCGATATTATGAGTTTCAAATGTCGGTTCACTGACTGGTTCATAGCTTT
GATCATAGGGCTTCCTATCGCAGTGATTGCGGGAATTTGTGTATGCTGTC
TCTGTTGCCCATTTTGCTGTCTTTATTCCATGTTTTGCTAATAATATAAT
ATTTGATAAAAAATATTGTAGACAAAGAAACAGATAAAGTTACTCAGATT
ATTATTATGTATTTATAATAAAAAATATATTATAACTCATTATTACTTAT
GAAGTAAATATAACAAATATTTTACAGTTAGTAGATTTATGGACCATTAT
TTATGAACAACATCTCGTTTGTGACCAAGTTAGACAAACACCTCGACTCT
TCGCCATATTTTTAGTTGCACCCATGTCTCCTGCATCTACATCTGCATCA
GTGACAATGTTCACTCGAAAAGGTGNNNNNNNNNNNNNNNNNNNAATGAA
GAAAAATAATTAATACTAAATGCTGTTCTCGAAAAAGAATCAACATTCAC
GTACCACAAATTGGTGCATTTACTTCTGCCATTGCTTGTGTGTTGAGCTT
TGCTCCACAATATCTATCACTCAGATTTAGACCTGGTGCACCACAAGTAC
AGTCTGATGATGAGCCTTCAATTCCTATAAAATCCAGAGTACATCCCGTA
TCTATCATTGCTTTAGCTTCTTTAACCCAAAGACTGAAGGCATTTGGTTC
ACTACAAACCTTGTAACGAATGCAACAAAATCCAGACTCTTGTCGAATAC
AAATGGAGTACCTTTGATCTGCTAAATGGCTTGTGTCCGTAANCAGGGAA
ATTGAAAGTAGTTAATTTCCCTGTAAGACCTTCGTGATATTGGAGACATC
CCGGAGGTGCTCTAAAATGTTATAAGAATGTAACTAATAAGTACGGATAT
AACAATATCAACTTACGAAAATGGAGCATCGCACTTTAGTTGACTAACTT
TGATCTCCCACATACGCACACCAGAGTCACCCATAAAATTGAACCGCATT
TGGGCAGTGTCTGACTCTCCGTTCCCTATGTCAATGTACACTATACACGG
ACAAATGATTGATTTATATACATATATTTCTACTACATATCTCTAAAATA
TATATAATAATATCAAATCATAAATACCATGTTGTCCTGTATTTTGACCA
CATATTGTTGGTACACTTTGGTCCACAAGAGTACTCGTCTATTTATAAAC
GTAGAAATAAATTAAAAACTTATAGTATATATATACATTYTATATCTTTA
GGAATTATTAATTGTAAATATAATAAAAACNAATATAATAAAACAACACA
CTGTTATCATGAATGTATCGACACATTTTCCTCCATCTACTTCTTCGGAG
CTGGATGGCCCATTGGTTGTAAATGACTCAAAGTCAAGTCTCAATTTACA
TATATCTACATAAAAAATAGTATAACGAATTCCTTTACATTGAAATAAAA
TGATTCCTTACCGATATGAGCCTTGTTGATCGTATAGCTTACAGCAGTTG
AACCGGTATAGGCATTTGGAAATCCAGGATTTGTGAMATAGGTACAATTC
TCTCGAATAGTACTACCACTACTAGAAACTAAAAAGACACAGCAGACTCC
AAAACTGAGGGAAAATAATCAATTAGTTAATTAATGAAGGTTAAATTATA
ATTAATAGATTAGTGTTTTACCCAGCTGCACATTGTCCTGCCGCTAATCC
ACCCTTGTTAGTACATTCTACATCAGTGTAGCAGGTTCCATTTCGACTCG
TCGATCCAGATCCACCACTGAAATGAGAAAAAGGAAGTTATGCAAATAAG
AAGGGGCAATTAAGTAAGAAATGTTATAATAGTATGTACTTGCTAATAGT
GCTTGTACTTCTACATGCTTCATTTTTGAATTGGACGATTGAGAAAAGTG
AGAGAACTTAATAAATAGAATAAAATTTTTATCAATTAATATTGAATGGA
ATATATCAGGAATGATGAAAACATACACTTCCCATCCCTATCATTTTTGG
ACGTGCTTTTGGAAAAATCAATGAAGAGGAGTGAAATGGATAAAATTATT
AAAAGCTTGTACATTCTGAGTTCAATGGATAAATTCAAATTGAAAGGAAA
TTGTAAGAGATTTCCAAAAAGTTGGATGGAGAAAATTATCTTCCGTACAA
AAGCAAATTTATTACTCAGGACTTTTTCAAAGAAATGAACAAGTTGAATG
ATATGCAAAAATGAGCCTTTTGTATGAGAAGCCATCGAAATAAATTTATT
TTGTCTAGAATCTAGATAATAACACATACAACCTTAATAATGAGTAGACA
ATATTTTATTTTTTTAAATTACAAAAAATAATGATCGAGCAATTTTAATA
ATTAGGCTATTCACTTAAAAAGATTTCACAGCAAAAAAGTTGATAAGTTT
AAAGTCTTCTCTGATGACTTTCTTAGTTGGAATAGTCAAATCAAAGAGAA
AACCATGGATAGATTTTCGATGAGTCTTTTTCTTCTCTGTTTATTTCATT
ATTCACTGATCATCCTCGGTTCTGAGGAGGAGGCTTTAACAAAGAATCAA
AGGGAATCACGACTACGTAAGTCTTCCAGAGAATAGATAAAGGGAAGTCT
TTTTAAATAATATCATGTCTTGATTTTCAGTTCCTGTATTTCAAGTTATA
AGGTGAGAAAGTTGTTATGGATGSTCCTTGAAAAGTCGTATATTATTTAG
AATATAGATATATTGATAACCACTTTAAAAAATTTAGATTCAGAAACGAT
GCATGTAGCGGTGGATCCAAGAACGGAACTTGCTACACATCAGCAGAATG
TGAATCCAGGGGTGGAACAAATGGGGGATCTTGTGCCAGTGGTTTCGGAG
TTTGTTGTACATGTAAGTTTTAAATATTTTCAATTTAACAACTAATTAAT
CGGTTTCATATTCTTTGAATAAAGTTACATCAAGATGTTCTGGAATGTCG
AGAGAGAATTGTACTTACTTTGAATCTGTAGGCAATGAACAAGGGTCTTG
TTCCCTTACAATTTGTAAGTGTGACGAAAGCGTGTGCCAAGTGAGTGGAG
TATAAAATAATTAAGACTACATAAAAGTGAACTTATTGTATGTTCTTAGT
TACGACTTGACTTTCAGTCATTCATGATCACTGGTCCCTCAACCCTTACA
GAAACAATTGGAAAAACAACTTTCGGAATTTTAAGTGCTGGTGGCGCAGT
AGAGGTTTCAGATCAAACTCAATGTACAACTGACACTTTTACCGTTACTA
ACCCTGGAGGAACTACTCCTCCAGTCATTTGTGGCTTKAATACARGAGAA
CATAGTAAAWCTTAATTTWATTTAAGTTAAAGTCAGTGAGTCAGTATTTG
TCCATTTTTAAAGTGTATGTTGATGCTTCGGACGCTTGTAATAGCCTTGT
GTTCCAATTTGGAGCAAATGCTCCTGGAGTCGCGAGTGTTCAAAGACAAT
GGTCAATTAAGGTATCACAGATTCGAAATGGGGATATAAGCATGGCACCT
AAGGGTTGTACTCAGTATTTCACGGGTACAAAAGGAGTTGTACGATCCTA
CAATTTTCAGGGTAAAACTCATTTAGCTCGACAAAACCAGAATATATGTG
TGAGAAGAGAGCGTGGAATGTGCCGGTGAGTATCAAAAACAAATTCTTTT
GTTCGTCTTATAACGATGTTTTGATCGATTTTCAGGATTTGTTGGGCCGC
TACCGGTGAAAAGGACTTTCTCCTCTCAGGTAACCTTTTCACATTAGTAA
CTATCCTTAAATACTTGATTATAATTTTATAATAATTTATAGGAAAGGAA
GAGAAGGGTTTTACCAAGGTATGTAAGATAGGTATTCTGATTTTGTAGTT
TATTAATTTTTAATTATAAATTCAGGGTAGCGTATGCTGTGGCTACGGGG
RAGATGGGRTGAAGACATCAGGATATGACTGTGTCATAATACCTGGAGCA
GAAAAAAAGACAGGGAAATTGGCAAATTCCAATGCTTTTTGTGGACGATC
CAAGGGATTAGTTGACATGACAATGGGTGATGCTAAAACTGTTTGCTGTA
AGTTAACAAAATGTTCATGAATACTTGATCTTTTTAAATTATTTTTCAGC
TCGAGCATTACCATTTTCAATAAGATTCGTATCGGATAAGTTTGAATTTA
AGGAAGAAGCAGCTAAATTGCCGAATTTGGGATTTCAATTAGCTTATACC
CAAGATAGCTGTACAGCATAATTAATCTTAAATTATTTCTGTGAAATTTT
AACATTAATTAAATATCTCCAAAATAAATAATACTTTCTCAATTATATTT
GACTTTAAACAACTATCATTATACAATCCACTTCCCCAGAATAATCCCTA
AAACAAAAATAACAATTACAATGTAAATTTGATTCGGAGGAAGATTCGAA
AAGTCTGTTAAGGCATCTTCGAAGTCCATAAGCGATGAATTGCCGACTTT
TTTATCATTAAGGGGTACTACACGAGTATTTTTAAGACCCATCAATCTAC
GCTCGTGGCTCTCTGGTTTAAAAGTACAGCTACAATCTATTTTATGATTA
TAAATCTTGATAAGAGAAGAATTTTTCCATATCCAATCCAAGTCCACTTC
GCCTTCAGTCAATATAATGTATTGGATTTTGAGTCTGAA back to top
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