EMLSAT00000012935, EMLSAT00000012935-708782 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012935
Unique NameEMLSAT00000012935-708782
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s988supercontigLSalAtl2s988:163498..166307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012935 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012935EMLSAG00000012935-695701Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058076EMLSAE00000058076-767004Lepeophtheirus salmonisexon
EMLSAE00000058077EMLSAE00000058077-767005Lepeophtheirus salmonisexon
EMLSAE00000058078EMLSAE00000058078-767006Lepeophtheirus salmonisexon
EMLSAE00000058079EMLSAE00000058079-767007Lepeophtheirus salmonisexon
EMLSAE00000058080EMLSAE00000058080-767008Lepeophtheirus salmonisexon
EMLSAE00000058081EMLSAE00000058081-767009Lepeophtheirus salmonisexon
EMLSAE00000058082EMLSAE00000058082-767010Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773628auto773628Lepeophtheirus salmonispolypeptide
EMLSAP00000012935EMLSAP00000012935Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012935

>EMLSAP00000012935 ID=EMLSAP00000012935|Name=EMLSAP00000012935|organism=Lepeophtheirus salmonis|type=polypeptide|length=611bp
MIQLGAPDDDDWETDPDYVNDLTEEERRYGGRRNCEAIDMNEIHESVVKK
ANEDAKAKAVLINGSQGYGGKFGIEKDRMDASAMGHDYEGKVEKHASQTD
YAKGFGGKHGVMKDRQDKSAVGWDHIEKVEKHDSQKDYKVGFGGKFGVQK
DRVDKSAMDWSHVENLNKHQSQTDYKGGFGGKFGIQSDRVDKSAVGWEHV
EKVEKHQSQKDYKTGFGGQFGVQKDRVDKSAVGWEHMENLNKHESQVDYA
KGFGGKYGIQTDRIDKNAHTFEDTPEVVGTTYTKDKPQVPTRQAKNLREM
FEKGGGGASNREEEFKAQKEKRKEQEALEVRAESRRIQDQKNTIDNDAAK
QHEKSVNNKDNLNEAQSVTSKGKALSFRQKFENNSMGQTKSSSNSFAEER
RKELEQIKLMKSENQMSNEEESSNSIDNVRKKLEISQGATSNVRERFENN
IKVMGTSITNKNPEENHTPVIMNSITKKKLEEHHXSSLNTASITNELEEQ
TPPVIDHKVQPEKVTDSTPQQVLHSEQETLTDNCYKAEVVTTQGIDENSG
GGRNGSLSAIARYDYQAAADDEISFLPDDIILNIEKVDEGWWLGECHGKY
GLFPANYVEII
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mRNA from alignment at LSalAtl2s988:163498..166307+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012935-708782 ID=EMLSAT00000012935-708782|Name=EMLSAT00000012935|organism=Lepeophtheirus salmonis|type=mRNA|length=2810bp|location=Sequence derived from alignment at LSalAtl2s988:163498..166307+ (Lepeophtheirus salmonis)
CCTTCACTTATCTCTCCCTCTTGAGTGACTCAAACCAAGGACAACTAGAG
AGAAGGACTAGAGACAGAATTGAGGCAGCTCCTGACTGCAGTCCTCAAAT
CATATTAATGTATTATTTTTCCTTCATTGATTTGTGGTTTTATTGTCGTC
TTTTCACTTTTAATGACGTCACAAATAATAATGAGCAAAGAAMTAAAAAA
GACTACAGTCAACAGCTGACTCCATTATGTCTCCAGACCTTCTCTCTTGT
AATCCTTACTCAAACTCCCTTGCTGTGCCTGAGTATTAAAAAACGAAAAG
GAAAGAAAAAGCAACTGAAATATCAAATATAAATAGGAGGATTTTATTAA
ATTTTAAAAGTACCGAAACGCCGATTCAATTAAGAATGATTCAACTTGGA
GCTCCGGATGATGATGACTGGGAGACGGATCCCGACTATGTTAATGATCT
CACGGAAGAGGAACGTCGCTATGGAGGACGTCGGAATTGTGAAGCTATTG
AGTGAGTATTAAATATTAATACCTCCGAAATCCAATTATCATCCATCACC
TTTGCGCTTTCATCCTGCATTATTTTTTTATTAAGTGCCCCAATGTCCAG
TGGTTAATGAAGAGTTTTTTTTGTTCTATTCAGTATGAATGAAATCCACG
AAAGCGTCGTTAAAAAGGCAAATGAGGACGCCAAGGCCAAAGCTGTACTG
ATCAACGGCTCTCAGGGCTATGGTGGAAAATTCGGTATTGAAAAAGATCG
TATGGACGCCTCTGCAATGGGACATGACTATGAGGGCAAAGTGGAGAAGC
ATGCAAGTCAGACAGATTACGCTAAAGGCTTTGGAGGTAAACATGGGGTC
ATGAAGGATCGTCAGGATAAGTCTGCTGTAGGTTGGGATCATATTGAGAA
AGTGGAGAAGCATGACTCACAAAAAGACTATAAAGTCGGTTTTGGAGGMA
AATTTGGGGTTCAAAAGGACAGAGTTGATAAATCTGCCATGGATTGGTCC
CATGTTGAAAATTTGAATAAACATCAATCCCAAACGGGTAAAAATCCATT
GATGTAATGAGAAACATAGATACACAACTTATTTTTAATAGATTACAAAG
GTGGTTTCGGTGGTAAATTCGGAATACAGAGTGATCGTGTTGACAAGTCA
GCGGTGGGGTGGGAGCACGTTGAAAAAGTAGAAAAGCATCAATCTCAAAA
AGGTAACTTGCAACAAAATATATTAGAAATCTCTCCAAGAATCCCTAACG
GATGTCTATAATAATTCATTACAGATTACAAAACTGGCTTTGGTGGTCAG
TTTGGAGTTCAAAAAGATCGAGTTGATAAGTCCGCTGTTGGATGGGAACA
TATGGAAAACTTAAACAAACATGAAAGTCAAGTGGACTACGCTAAAGGCT
TTGGCGGAAAATATGGTATTCAAACTGATCGAATAGATAAGAATGCTCAT
ACTTTTGAAGACACTCCGGAAGTTGTGGGCACAACTTACACAAAGGATAA
GCCCCAAGTTCCTACTAGACAAGCTAAAAATCTCCGTGAAATGTTTGAAA
AGGGTGGAGGTGGAGCTTCGAATAGGGAAGAAGAGTTCAAAGCGCAAAAG
GAAAAGCGTAAGGAACAAGAGGCACTGGAAGTACGAGCGGAAAGTAGGAG
AATTCAAGATCAAAAGAATACTATAGACAATGATGCTGCGAAGCAACATG
AGAAGTCTGTGAATAATAAGGATAATCTAAATGAAGCTCAGAGCGTGACA
TCCAAAGGCAAAGCATTGAGCTTTAGACAAAAGTTTGAAAATAATTCCAT
GGGACAAACAAAGAGTAGCAGCAATTCCTTCGCAGAGGAAAGACGAAAGG
AATTGGAGCAAATTAAGCTAATGAAATCTGAGAATCAAATGTCAAATGAG
GAAGAAAGCTCTAATTCCATTGATAACGTTAGAAAGAAACTGGAAATATC
GCAAGGGGCAACTTCCAATGTACGTGAAAGATTTGAAAATAACATTAAAG
TCATGGGTACTTCTATTACAAACAAGAACCCGGAAGAGAATCATACTCCA
GTCATCATGAACTCGATTACAAAGAAGAAGCTGGAAGAGCATCATKCCTC
TTCGCTCAATACAGCCTCTATTACAAATGAATTGGAGGAGCAAACTCCTC
CAGTAATTGATCATAAAGTCCAGCCAGAAAAAGTGACAGATTCGACTCCG
CAACAAGTACTACATTCAGAACAAGAAGTGAGTATAACTAATTATAAATC
AATTATAATATTTCGACTAATTAATTGTATTTAAGACTCTTACAGATAAC
TGCTATAAGGCAGAGGTAGTAACCACACAAGGAATAGATGAAAACAGCGG
CGGTGGSAGGAATGGCTCCTTATCTGCAATTGCCCGATATGATTATCAAG
CAGCGGCAGATGATGAGATATCCTTTTTGCCTGATGACATCATTCTCAAT
ATTGAAAAGGTGAATATTTTCAAATATTAGCTTTTGCTTATTTTGACATA
TATAGAAACATATCTACATAATCAATTATTAGTGTGCTGCTTGAATCATC
TTTTGTCCTGTTCTTTAAATTTTATTCCAGGTGGATGAGGGATGGTGGTT
AGGAGAGTGCCATGGGAAGTATGGACTGTTCCCTGCGAATTACGTGGAAA
TTATTTAGTTATTGCAATTCGTTTTACATATTATTTATTTAATTTTTTTC
CTATCATGCTTTTAACTTCAAACATGTGATATTATCAGTGTATTATTAAT
TAATTATTCTATTTGTTATTTTTTTTTTTTTACCTACATACTCATTATGT
TAAATTTTAT
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