EMLSAT00000012952, EMLSAT00000012952-708799 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012952
Unique NameEMLSAT00000012952-708799
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:1091191..1092805 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012952 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012952EMLSAG00000012952-695718Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058188EMLSAE00000058188-767116Lepeophtheirus salmonisexon
EMLSAE00000058189EMLSAE00000058189-767117Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780398auto780398Lepeophtheirus salmonispolypeptide
EMLSAP00000012952EMLSAP00000012952Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012952

>EMLSAP00000012952 ID=EMLSAP00000012952|Name=EMLSAP00000012952|organism=Lepeophtheirus salmonis|type=polypeptide|length=306bp
MNLARIFSTTCTRGRGISTQTKNNALNFFTTTRHFSLTSVRKNEEAGEGX
IQTIDQHTLSSVIEPTFRELGLGIHGSVLPHGILQSALENCHTILGVPWW
ESIVITTLILRGAVFPIIVRTQKNMIHLASHQPEMNRLREEALKETDPKL
RREEAMKIMAYMQENNLFPLKMYAPILANGVVMMSMFFAIRGLTNLPVQS
MSTGGIYWFKDLTSFDPTYTLPFLASFTIFIQIQMGADGMNNDGLPPGFK
KLLYILPLMSFPVMTQFPSALCVYWLTSNLISLVQTVLLKIPYVKKALNI
KEVAKK
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mRNA from alignment at LSalAtl2s98:1091191..1092805+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012952-708799 ID=EMLSAT00000012952-708799|Name=EMLSAT00000012952|organism=Lepeophtheirus salmonis|type=mRNA|length=1615bp|location=Sequence derived from alignment at LSalAtl2s98:1091191..1092805+ (Lepeophtheirus salmonis)
TGATTGACTTATTTGGGTAAATACCAAATGATTTCGGGCCTTTTTTCTGT
TTCTTTTCGGAGGAAAGTTTGCATGATACAATAACGCTACAATTCTAGCT
ACTCTAAGCACGAAGATGAATGAGCTTGACCCAGCTGATTTTTCATCCCA
AAGTGAGGTACACATTTTTATCCTACTTTTGTCCAAAGACGTTACTCTTG
TCAAAATCGCGTGAGTGTCATGAATCTGGCTCGTATATTCTCTACTACAT
GTACTCGAGGAAGGGGGATTTCAACTCAAACTAAAAACAATGCTCTTAAT
TTCTTTACAACTACTCGCCATTTTTCACTCACATCCGTTCGAAAAAATGA
AGAGGCAGGAGAAGGAGMAATTCAGACTATTGACCAACACACGTTGTCCT
CAGTTATTGAGCCAACATTTCGTGAATTGGGTCTAGGGATTCATGGATCC
GTTCTTCCTCATGGCATCCTACAGAGCGCATTAGAAAATTGTCATACTAT
CCTTGGGGTTCCATGGTGGGAATCCATCGTAATCAGTTAAGTGTTTGTAT
TATTTTTTAAATGTCTTTTTAGTTTTCATTTGAAAAGAATTAAGTGACAA
GTCAAATACAAATACATACAGGTTTGACTCCATCTCTAATAACGAACCCA
TTTTCAAATTTTAGCAACGCTTATCCTCAGAGGAGCCGTTTTTCCAATTA
TTGTGCGAACTCAAAAAAATATGATTCATTTAGCCTCCCATCAACCAGAA
ATGAATCGCCTACGAGAGGAAGCACTCAAAGAAACAGATCCAAAACTTCG
CAGGGAGGAGGCCATGAAAATAATGGCGTACATGCAAGAGAATAATTTAT
TCCCTTTAAAAATGTATGCTCCAATTTTGGCAAACGGCGTGGTTATGATG
TCCATGTTTTTTGCCATTCGAGGTTTAACCAATTTACCAGTTCAAAGTAT
GTCAACTGGTGGAATATACTGGTTCAAAGATCTCACCAGCTTTGATCCAA
CATACACTTTACCGTTCCTTGCATCTTTTACAATATTTATACAGATTCAG
ATGGGTGCTGATGGAATGAATAATGACGGACTTCCTCCAGGATTTAAAAA
ACTATTGTATATCCTTCCATTAATGAGCTTCCCAGTTATGACTCAATTTC
CATCTGCGTTATGTGTTTACTGGCTAACTTCCAATTTAATATCATTGGTT
CAAACTGTGTTACTTAAAATACCTTATGTCAAAAAGGCTCTGAATATTAA
AGAAGTCGCAAAGAAATGATGGAACATTTTTAATTGTTATTTATTTGGGA
TTATATATTATGTTAATAATCCATTTTCGAATTATATTAATTATTAAATC
CTTTGGGGAATGAACGTTTTATAATTTTATATGCTATTTGTTAATATTAG
GTAATGTTCTATTCAAGTAGTAGGAAAGTTGTTAATTATCAAAGCGTATT
TTAGATTATGTCTATAAGTTCCAAATAATGATCCTCAATTTCGCATTTGA
TCTATCAGTATTACTCTATGCTGTATTTAAAAAAAATAGATTGATGGATA
ATTTGTACTGTCTTTGTTGTAATTTGGAACATTTTACAGATAAAAAGCTC
AATATTAGCTTTATA
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