EMLSAT00000012958, EMLSAT00000012958-708805 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012958
Unique NameEMLSAT00000012958-708805
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:1119919..1121441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012958 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012958EMLSAG00000012958-695724Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058206EMLSAE00000058206-767134Lepeophtheirus salmonisexon
EMLSAE00000058207EMLSAE00000058207-767135Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780441auto780441Lepeophtheirus salmonispolypeptide
EMLSAP00000012958EMLSAP00000012958Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012958

>EMLSAP00000012958 ID=EMLSAP00000012958|Name=EMLSAP00000012958|organism=Lepeophtheirus salmonis|type=polypeptide|length=488bp
MSNSETDKASTDGGDSLSSGXKTTLCQFYIQGNCNKSTDLCNFAHGTSDL
RTPEGNPIGFEPTVDKYKSTLCAKFLSIGSCPFGVACRFAHGVRELRKPK
NKNNPLFKTTLCKLFSESGFCPXAVNCQFAXGVAELRSKPIDSFELESLS
PEERQRRLEKAKNTPGYKTKICSKYREHNHCEFGELCHFIXVTLYMEMVR
SSLGHYSFVNFFLFISEVIPGIDLMHKNDNSNKFDATYKTTMCRKIMSKE
MCEYGSKCRFAHSESELRKPLNVSMNAPHNTNYHNSLAFKTVLCSNYTET
GQCKYGDNCQFAHGSEQLRXPQPLQANIQQQSIPPISKFSGNSPSVLYKT
TMCANIRNKIPCPHGPSCLFAHSNGELRSPMQNISVNTYSTGNKPPMCQS
LRVYGGGYSCYSIENSSMPLGSNAPRTYGIQLSSHMNNSAKKTAMCRHIQ
FNGICPRGNQCTFAHSHEELQGKQDDDKEDHVYFKRKS
back to top

mRNA from alignment at LSalAtl2s98:1119919..1121441-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012958-708805 ID=EMLSAT00000012958-708805|Name=EMLSAT00000012958|organism=Lepeophtheirus salmonis|type=mRNA|length=1523bp|location=Sequence derived from alignment at LSalAtl2s98:1119919..1121441- (Lepeophtheirus salmonis)
ATGTCAAACAGTGAGACGGACAAAGCCTCTACGGACGGAGGGGATAGCCT TTCCTCCGGGYGGAAAACCACACTATGCCAATTCTACATCCAAGGGAATT GTAACAAATCCACGGATTTGTGTAACTTCGCTCACGGCACTTCCGACTTG AGGACACCTGAGGGAAATCCCATAGGATTTGAGCCCACTGTGGATAAATA TAAATCCACACTCTGCGCTAAATTTCTTTCCATTGGATCTTGTCCCTTTG GCGTTGCATGTCGCTTTGCCCACGGAGTGCGTGAACTTCGAAAGCCGAAG AACAAGGTACGCCGAACCAAAGCATCATCTTTTCTTATCTATTTCTTACT CCTTTTCTTTAGAATAATCCCTTGTTCAAGACAACTCTGTGTAAGCTTTT CTCTGAGTCAGGATTTTGTCCCAMCGCCGTGAATTGCCAATTTGCTCAKG GTGTAGCAGAGTTGAGATCMAAGCCGATTGACTCTTTCGAGCTGGAAAGT TTGTCACCGGAAGAACGACAACGGAGATTGGAAAAGGCAAAAAATACTCC TGGATATAAAACAAAGATATGTAGCAAATATAGGGAGCACAATCATTGCG AATTTGGAGAACTTTGTCACTTTATACANGTCACTTTATACATGGAAATG GTTCGTAGCTCATTAGGGCACTATTCTTTTGTTAATTTTTTCTTATTTAT TTCAGAAGTGATACCTGGTATAGATTTGATGCATAAAAATGACAACTCGA ATAAATTTGATGCTACGTACAAAACAACCATGTGTCGTAAGATTATGTCA AAAGAAATGTGTGAATATGGATCTAAATGTCGCTTTGCTCATTCTGAGAG TGAGCTTAGAAAACCCTTGAATGTTAGCATGAACGCTCCTCATAACACCA ATTACCACAATTCTCTTGCATTTAAAACTGTCCTCTGTTCCAACTATACT GAAACGGGGCAGTGTAAATATGGAGACAATTGTCAATTTGCTCATGGATC TGAGCAATTACGCTTMCCTCAGCCTTTACAAGCTAATATTCAGCAACAGT CGATTCCTCCTATATCAAAATTCTCTGGCAATTCTCCATCCGTTCTCTAC AAAACAACTATGTGCGCCAATATAAGGAACAAAATMCCTTGCCCGCATGG GCCTTCCTGTTTATTTGCCCACAGTAATGGTGAACTTCGCTCTCCAATGC AAAATATATCGGTCAACACTTATTCAACTGGAAACAAACCTCCCATGTGT CAATCTTTACGGGTCTATGGTGGTGGATATAGTTGCTATTCTATCGAAAA TAGTTCTATGCCACTCGGTAGTAACGCTCCTCGAACCTATGGTATCCAAT TATCGTCTCACATGAATAACTCAGCGAAAAAAACTGCCATGTGTCGTCAT ATTCAATTTAATGGAATTTGCCCAAGAGGAAATCAATGCACATTTGCCCA TTCTCACGAAGAGCTTCAAGGAAAGCAGGACGACGACAAGGAAGATCATG TCTATTTTAAACGTAAATCTTAA
back to top
Add to Basket