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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s98 | supercontig | LSalAtl2s98:1131260..1137575 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000012960 >EMLSAP00000012960 ID=EMLSAP00000012960|Name=EMLSAP00000012960|organism=Lepeophtheirus salmonis|type=polypeptide|length=1965bp
MKLVLSLLLFAGVALGYSPSYYGWAPSKEYVYEFETQMLTGIPEIRSQYS
GLKLSSKVRIQSFPDYSLRVQFVEPKFVTVNQEIPSIDGRLYVPSTHSEE
LPKAIYGPLVTPFEVHFKRGVIESLFVEKDEPVVVTNWKKALLSQIQTDL
SGSREGHVQKLNHEVFPLVAKDSQEMKNVSFFHTMERXLHGDCETTYTLH
PLPLYQAHELEEQWRNHKIKVFETVPEYFQSIRSQKEIHEVMEESGRACT
GKQYFQVTKTHNFDNCRERPVFSAWSGIKSNCDVTRSGXDDAFNSIVSTR
YIICGTPDLFVIRKATTENIISLSPTGFNTPEKLTSFSTVTLELRTILST
VSHQIPKPKTPKTVGNLFMEYPEHESFNSESISEQWTKGSIISPTNISGF
TGFKSLSGFYPIHPMPTMDTAPTLLYPISLSKPELIRDVQEMMSKIVRET
YEVPESCSSSSDLAGYIVSIAEALRPLSLTELKELDTEVHRFMEVRDKEA
ILTSQYLFYDILAMVGTNPSISYIKQLIGSDKIPIQYAPDVLESALRNIK
TPTPELFNLVFTMVKTLKAKSPQLYYVSTVSFSDLLHRACINPSSMVAQF
PVHVYGNFCNPETPFIKDQYITFLESQIQGGSQGSKSEKVVLINALGKLG
HYKAVSTLVKVIQGKVSQEPMIRSLAVYALKRTAMQYPAKVKPILMSIIN
NPGEHPEVRIAAVSVLPFSSPSTTELQKIALRTWFEPSKQVTSFIYSTLK
SLRTTQVPELMQFRNKVKSVIPMVRRTHSGIQFSHNIHMXTFLDYLKXVA
NNKLEIVNTPESMLPAKISFSEDWINRSMRIKGLSFSLYSQGMDYVFEKM
MTHLGLKESPSPIVTSELQKITQKLQITPRTLQEPELNLKIKFMGLERIF
SLDSKFYMETIQKVTEKLRSSPQILSHGLPFKYTKTRNFVDVQSVAPTAS
GFPVRIQSVAPMVYSVKGYTSGNFSSNVPSVQHEVSFNHSARVKITPILH
AKVETTMGVISPFTKQYIGSGFEMGLHSSTPLDVKVSVNSLGQLKLTMKS
PEEVQNEVELAHVYTKPFTFKKSYETXXPXSRSPGNKMILSGTILKKFTF
NPTKSTVGIDAPLKISTDYPVMDLAVAYKKFSNAPNPMAILKAMTIPSTL
RYVSFNLKFNPTTSTTKELRTRFSLASGYKPAPSEFIRYMLPRGYTQETE
IMKMCREHRPHDITGCIQSQTKSLHAASEVSNEARSLCLEHVRINMFPIK
SQSIFDQEMQNCIKSVKICESVRFVCSQSSTNTVNPNTCEEKERSCIYRQ
INLIKLNTVLHNLQTGTGVSVTVDXSXNSPYEMRTYSTILALGASTSQHH
EIRGYVNAEIKSHELPAHVLIADSKSRLPSISSRWNLEQMINDEITMEHD
MVIYYGKRTSPRDGMHKIILEAFATKSNGLRKSIVESPEYILCNKEIGEG
RTLAPVCEKLRHLSASVDTFKIRTKFPMRQTSSTYAKSYIRNVLETVFFP
YLTERYFDATSAVEGIKKDETLLEAFVSREGDLAHIKYKEHGFEWDVSNI
RLPKTLTQHILPLSFRNHQLTTGSRFIQKFTSQQSPASCTVEPNFVTTFD
NKTYPYTLNDCEHLIVKDCSGLWPMAXTARKAGSQMEVKMIVGKHVVVMS
PLQSSVINNITVNGIHIPLVEGGLYRYIEPVNESSGSSIPPSSTPGPLLS
SLGPISTEGRTVIKFWSYLDGTVVVKHIKTGLIVIFDGERIEVNPPAFLS
SKACGICGDMNGESSADLASPKMCIFEQPRMAXYSYMIKESCQGIPTPEE
KTKFEKESHECVLKKISVTPLEDLITRLIKVRSGPLGIISKHLIEYRANG
NEICFSQRVLDICGGRSVPVIGHMASTPFTCLQSYSHLAKHLKERVVANE
EIPELMKXPTTYNRMIEEASNCQSSSSSGSGMGGGSXPSSPSSSDSSSHH
AQPSTGRFQPQIYNY back to topmRNA from alignment at LSalAtl2s98:1131260..1137575+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000012960-708807 ID=EMLSAT00000012960-708807|Name=EMLSAT00000012960|organism=Lepeophtheirus salmonis|type=mRNA|length=6316bp|location=Sequence derived from alignment at LSalAtl2s98:1131260..1137575+ (Lepeophtheirus salmonis)
CCAGTCTTAGATTGACTCGTCCCTTACTTACTTTTTTAGCGAAATATCTA
AATTGGTCAAAATGAAGTTAGTTTTATCTCTTCTTCTTTTTGGTAAGGAC
GACCTAATATGAGAAAGTCAAACATACTAAAAACTAATTTGATTTATAAC
TTTTTTTTATAGCTGGTGTTGCTCTAGGATATAGCCCTTCTTACTATGGA
TGGGCTCCCTCAAAAGAATATGTATATGAATTTGAAACTCAAATGCTTAC
GGGTATTCCCGAGATTCGTTCACAATACTCTGGTTTGAAATTAAGCTCCA
AAGTCAGAATCCAATCCTTCCCAGATTATAGCTTAAGAGTTCAATTTGTG
GAACCTAAGTTTGTCACTGTTAATCAAGAAATCCCATCCATCGATGGTCG
TCTTTATGTTCCCAGTACACACTCTGAAGAGCTCCCAAAGGCTATTTATG
GACCTTTGGTCACTCCTTTTGAAGTCCACTTCAAGAGAGGAGTCATTGAG
TCTCTTTTTGTTGAAAAAGATGAGCCTGTTGTTGTTACAAATTGGAAAAA
AGCTCTCTTGTCTCAAATTCAAACTGACCTCTCAGGTTCCAGAGAAGGAC
ATGTACAAAAATTAAATCATGAAGTCTTCCCTCTTGTTGCAAAGGATTCA
CAAGAAATGAAAAATGTTTCATTTTTTCACACTATGGAAAGAMCTCTTCA
CGGAGACTGTGAGACTACCTACACTTTGCATCCTCTTCCTCTTTATCAAG
CTCATGAATTGGAAGAACAATGGAGAAACCACAAAATCAAGGTATTTGAA
ACCGTTCCTGAATACTTCCAATCTATTAGAAGTCAAAAAGAAATTCATGA
AGTCATGGAAGAAAGTGGACGTGCCTGCACAGGAAAGCAATACTTCCAAG
TTACAAAGACTCACAACTTTGATAACTGCCGTGAAAGACCCGTTTTCTCT
GCTTGGTCAGGAATCAAAAGCAATTGTGATGTAACCAGATCCGGCTGKGA
TGATGCCTTCAATTCAATCGTTTCAACTCGCTATATTATCTGTGGTACAC
CTGATCTCTTTGTCATCAGAAAAGCAACAACAGAAAATATTATTTCTTTG
TCTCCTACTGGATTTAACACACCAGAAAAATTAACATCCTTCTCTACAGT
CACTTTGGAATTGAGAACAATTCTTAGCACCGTTTCTCACCAAATTCCCA
AGCCAAAAACTCCTAAGACTGTGGGCAACCTCTTCATGGAATATCCTGAA
CATGAATCTTTCAATTCCGAAAGTATCAGTGAACAATGGACAAAGGGCTC
TATTATTTCTCCCACAAATATATCTGGATTCACTGGATTCAAGAGCTTGA
GCGGTTTCTACCCCATTCATCCAATGCCTACAATGGACACTGCTCCAACT
CTTCTCTATCCTATTTCTCTCTCCAAGCCTGAGCTTATTAGAGATGTTCA
AGAAATGATGAGTAAAATCGTTCGTGAAACCTATGAAGTCCCTGAAAGCT
GTTCATCATCATCTGATCTTGCTGGCTATATTGTTTCCATTGCAGAAGCT
CTTCGTCCTCTCAGCTTGACTGAGTTAAAAGAGCTTGATACTGAAGTTCA
CAGATTTATGGAGGTACGTGATAAGGAAGCTATCTTAACTTCTCAATACC
TTTTCTACGATATCCTTGCTATGGTTGGAACCAACCCCTCAATCTCTTAT
ATTAAGCAACTCATTGGTTCTGACAAAATCCCTATTCAATATGCTCCTGA
TGTCCTAGAATCTGCTCTCAGAAACATTAAGACTCCAACTCCAGAACTTT
TCAATTTAGTTTTTACTATGGTGAAGACACTCAAGGCCAAGAGTCCTCAA
TTGTACTATGTCTCTACAGTATCTTTCTCTGATCTTTTGCATCGTGCATG
CATCAACCCTTCTTCCATGGTTGCCCAATTCCCTGTCCACGTGTATGGAA
ACTTCTGTAACCCTGAAACTCCATTCATCAAAGATCAATATATTACATTC
TTGGAAAGTCAAATTCAAGGAGGTTCTCAAGGATCCAAATCCGAAAAAGT
TGTTCTTATTAATGCTTTGGGTAAACTTGGTCATTACAAGGCTGTTTCCA
CTCTTGTTAAGGTTATTCAAGGTAAGGTTTCTCAAGAGCCCATGATCAGA
TCCTTGGCAGTATATGCCTTGAAACGCACTGCTATGCAATATCCAGCTAA
GGTTAAGCCCATTCTTATGAGCATTATCAACAACCCTGGCGAACACCCAG
AAGTCCGTATTGCTGCCGTTTCCGTTTTGCCATTCAGTTCTCCTTCAACC
ACTGAACTTCAAAAGATTGCTTTGAGAACATGGTTTGAACCTTCTAAGCA
AGTAACTTCCTTCATTTATTCTACATTGAAAAGCTTAAGAACAACTCAAG
TTCCTGAACTTATGCAATTCCGCAATAAGGTCAAGAGTGTCATTCCAATG
GTTCGCAGAACTCATTCTGGAATTCAATTTTCACACAACATYCACATGYC
CACWTTCTTAGACTACTTGAAGWTTGTAGCCAATAACAAATTGGAAATTG
TCAACACTCCCGAATCTATGTTACCTGCTAAAATATCTTTCTCTGAAGAT
TGGATCAATAGATCTATGAGAATCAAGGGATTATCATTCAGTTTATACTC
CCAAGGAATGGACTATGTTTTTGAAAAAATGATGACTCATTTGGGACTTA
AGGAATCTCCTTCCCCAATTGTCACATCTGAATTACAAAAGATTACACAA
AAACTTCAAATTACACCCAGAACTTTACAAGAGCCTGAACTCAACTTGAA
AATTAAATTCATGGGTCTTGAACGTATTTTCTCATTGGATTCAAAATTCT
ACATGGAAACAATTCAAAAAGTTACTGAAAAGCTCCGTAGTAGCCCTCAA
ATTTTATCTCATGGCCTTCCTTTCAAATACACTAAAACCAGAAACTTCGT
TGATGTTCAATCTGTTGCACCAACTGCCAGTGGTTTCCCTGTTCGTATTC
AAAGCGTTGCTCCAATGGTTTATTCTGTCAAGGGTTACACTTCTGGAAAT
TTCAGCTCTAATGTTCCTTCAGTTCAACATGAAGTATCCTTTAATCACTC
TGCTCGCGTGAAGATCACACCAATCCTTCATGCCAAGGTAGAAACCACCA
TGGGAGTAATCTCCCCCTTCACCAAACAATACATTGGTTCTGGATTTGAA
ATGGGACTCCATTCATCCACTCCATTAGATGTTAAGGTTTCTGTTAACTC
CTTGGGACAACTTAAATTAACTATGAAATCCCCTGAAGAAGTTCAAAATG
AGGTTGAATTAGCTCATGTTTATACCAAACCATTTACATTCAAGAAATCC
TATGAAACTAYCGYCCCAGYTAGCCGATCTCCAGGAAACAAGATGATTCT
TTCTGGAACTATCTTAAAGAAATTCACCTTCAACCCTACTAAGTCAACTG
TTGGAATCGATGCTCCTCTCAAAATTTCTACTGACTACCCAGTTATGGAC
TTGGCAGTAGCTTACAAGAAGTTTAGCAATGCTCCCAACCCAATGGCCAT
TCTTAAAGCAATGACTATTCCATCAACCCTCAGATATGTCTCCTTTAACT
TAAAATTCAATCCTACTACATCGACTACAAAGGAACTCAGAACAAGATTT
TCTTTAGGTAAATATCATTAAAAGTTAATTAGAAATGTAATTATTGTGTG
TAATAACCATTTTCATAGCTTCTGGATACAAACCTGCTCCATCTGAGTTC
ATTCGTTACATGCTTCCTAGAGGATATACTCAAGAAACTGAAATTATGAA
AATGTGCAGAGAGCATCGTCCACATGACATTACTGGATGTATTCAAAGCC
AAACCAAGTCATTGCATGCTGCTTCTGAAGTATCTAATGAAGCTAGATCT
CTTTGTTTGGAACATGTCAGAATTAATATGTTCCCAATCAAATCTCAATC
TATCTTTGATCAAGAAATGCAAAATTGTATCAAATCAGTGAAGATCTGTG
AATCAGTTAGATTTGTATGTTCTCAATCTTCGACAAACACAGTTAATCCA
AATACATGCGAAGAGAAGGAAAGAAGCTGTATCTATCGCCAAATCAATTT
GATTAAATTAAACACAGTCCTCCATAATCTTCAAACTGGAACGGGTGTGT
CTGTTACTGTGGATGSTTCTTTKAACTCTCCMTATGAAATGAGAACATAC
TCCACCATTCTTGCATTAGGGGCTTCAACAAGTCAACATCATGAAATTAG
AGGTTATGTTAATGCTGAAATTAAATCTCATGAATTACCTGCTCATGTCT
TGATTGCGGACTCCAAGTCTCGCCTTCCTTCAATCAGTTCAAGATGGAAT
TTGGAACAAATGATCAATGATGAAATTACTATGGAACATGACATGGTTAT
TTATTATGGAAAGCGTACTTCTCCTCGTGATGGAATGCATAAGATCATTT
TGGAAGCTTTTGCCACCAAGTCCAATGGACTTAGAAAGTCAATTGTTGAA
TCACCTGAATACATTCTTTGCAATAAAGAAATTGGAGAAGGACGTACTTT
GGCTCCAGTCTGTGAAAAATTACGTCATCTCTCTGCATCTGTTGATACAT
TCAAAATTCGTACAAAGTTCCCAATGAGACAAACTTCCTCCACATACGCT
AAATCCTATATCCGCAATGTTTTGGAAACAGTTTTCTTTCCTTATCTTAC
TGAACGTTACTTTGATGCCACATCTGCAGTTGAAGGAATCAAGAAAGACG
AAACTCTTTTGGAGGCATTTGTATCACGTGAAGGAGACTTGGCTCACATC
AAGTACAAAGAACATGGATTCGAATGGGATGTCTCTAACATCCGTCTTCC
AAAAACTCTTACCCAACACATCCTCCCATTGAGTTTCCGTAATCATCAAT
TGACTACTGGTTCAAGATTTATTCAAAAATTCACATCTCAACAATCTCCA
GCTTCTTGCACAGTTGAGCCCAACTTTGTCACAACATTTGATAACAAAAC
TTACCCATATACTCTTAATGACTGTGAACACCTTATTGTAAAAGATTGCT
CTGGATTGTGGCCAATGGCTGKTACTGCCCGTAAAGCTGGRTCACAAATG
GAAGTCAAGATGATTGTTGGAAAACACGTCGTCGTCATGTCTCCTCTCCA
AAGTTCAGTCATTAATAATATCACCGTTAATGGAATCCATATTCCATTGG
TCGAAGGTGGTCTCTACAGATATATTGAGCCCGTTAATGAATCATCAGGC
TCTTCTATCCCTCCCTCTTCTACTCCTGGACCTCTTCTTTCTTCTCTTGG
ACCTATTTCCACTGAAGGAAGAACCGTCATTAAGTTTTGGAGCTACCTTG
ATGGAACCGTTGTTGTCAAACACATTAAAACTGGATTAATTGTTATCTTT
GATGGAGAAAGAATTGAAGTTAACCCACCAGCATTCCTCTCCAGCAAAGC
TTGTGGTATTTGCGGAGATATGAACGGCGAATCTAGCGCTGATTTGGCCT
CACCAAAGATGTGCATCTTCGAACAACCAAGAATGGCTGSTTATTCTTAC
ATGATTAAGGAATCTTGTCAAGGAATCCCTACACCTGAAGAAAAAACCAA
ATTCGAGAAAGAATCTCATGAATGTGTATTAAAAAAGATTAGCGTCACTC
CTTTGGAAGATTTGATTACTAGACTTATCAAGGTCAGATCAGGACCTTTG
GGAATTATCTCCAAACATTTGATTGAATACCGTGCAAATGGAAATGAAAT
TTGCTTCTCTCAAAGAGTTCTCGACATTTGTGGAGGCCGCTCCGTTCCAG
TTATTGGTCACATGGCCTCAACTCCATTCACTTGTCTCCAATCTTACAGT
CATCTCGCTAAACATCTTAAGGAAAGAGTAGTTGCTAACGAAGAAATCCC
CGAACTCATGAAGTMCCCCACCACATACAACAGAATGATTGAGGAAGCTT
CTAACTGTCAATCTTCTTCATCCTCTGGATCAGGAATGGGAGGAGGATCT
TTMCCTTCCTCTCCATCATCTTCTGATTCCTCATCTCATCATGCTCAACC
CAGCACAGGAAGATTTCAACCTCAAATCTATAATTACTAAGATGCCTGAA
AAGATACATCCTTTTTTAATGATTAATTAATACATACCTCTGCGGATTTA
GTATATTATTTAGAATGATATTTTTTTGACAAAATATATTAATAAATGAG
ATAAAAAAAATTATCATATCCTTTCTAATTGTTTGATCAAATCAATAGGT
GCAATCTTCACTGATAGTTAGCTATTGAATTAGATTCTTTCATAATAAAT
ATCTAGTGGACTTTCC back to top
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