EMLSAT00000012968, EMLSAT00000012968-708815 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012968
Unique NameEMLSAT00000012968-708815
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:1269443..1272667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012968 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012968EMLSAG00000012968-695734Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058266EMLSAE00000058266-767194Lepeophtheirus salmonisexon
EMLSAE00000058267EMLSAE00000058267-767195Lepeophtheirus salmonisexon
EMLSAE00000058268EMLSAE00000058268-767196Lepeophtheirus salmonisexon
EMLSAE00000058269EMLSAE00000058269-767197Lepeophtheirus salmonisexon
EMLSAE00000058270EMLSAE00000058270-767198Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780581auto780581Lepeophtheirus salmonispolypeptide
EMLSAP00000012968EMLSAP00000012968Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012968

>EMLSAP00000012968 ID=EMLSAP00000012968|Name=EMLSAP00000012968|organism=Lepeophtheirus salmonis|type=polypeptide|length=528bp
MTSPKEDEESKSLEKSIPLKQEEMAPLAAPEIASMDSLGDKLQDSPQREP
NKCCLPLSKDEVMKFAKDPYWIRLRWILFALFWITWVAILVISIIIIVVT
PKCPTPKPKEWWQRAPIYQIYVKSFKDSXXETELAILKLMINGDPAWSYN
EERGEWYFHQIGTTQPDFNLRNPRVVKEIKDILRFWLDLGVDGFRFKYVD
YLFESVSLEDEPEITSELDYSSLNHTKTHILEDNLQFLLDIRKLLDEKTE
EDESKPRIMMTDIESKNAIKYYGMNGSIAHIPLNYISLDNPLNATNIYNT
INKYLKEVKGVPTAWPNFIFDNHKHSRSGTWFGSEFINSLNMIFMLLPAT
PITYYGEELGMLDIETIGSSNIVGKSPMIWSKEEGAGFTYNSSVTPWMRI
MDGYEDLNVECQVKDPDSYYSFYKALAKLRLSDAILQGEFNSKVIDGEVF
TYSVVKKGNPGILVIVNFGEAXSDSDISKFKFMPDSGSVLLGTNTSSTDH
VGVTKVNFDSIKLRPKEGMVISFVANFE
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mRNA from alignment at LSalAtl2s98:1269443..1272667-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012968-708815 ID=EMLSAT00000012968-708815|Name=EMLSAT00000012968|organism=Lepeophtheirus salmonis|type=mRNA|length=3225bp|location=Sequence derived from alignment at LSalAtl2s98:1269443..1272667- (Lepeophtheirus salmonis)
ATGACCTCCCCAAAAGAAGATGAAGAATCAAAATCACTTGAAAAAAGTAT
ACCACTGAAGCAAGAAGAAATGGCCCCACTTGCTGCACCAGAGATTGCTT
CCATGGACTCTCTTGGGGATAAACTTCAGGACAGTCCTCAGAGAGAACCA
AATAAATGTTGTCTACCTCTGAGCAAGGATGAAGTTATGAAATTTGCAAA
GGATCCTTATTGGATTCGACTCAGATGGATTTTATTTGCATTATTTTGGA
TTACATGGGTTGCAATACTCGTTATTTCTATAATTATTATCGTTGTAACT
CCAAAGTGTCCTACACCTAAACCTAAGGAATGGTGGCAAAGAGCTCCGAT
TTATCAAATTTATGTTAAATCTTTCAAAGATTCGGANNTGGAGACGGAAT
TGGCGATCTTAAAGGTTTATATCAAAATTATATCATATTTCTCCTAATGA
ATTATAATACACGTTAAAAAGTACACTTAATACGTAAATTTTGTTGAAAT
GAAGGATAATACTAAATAATACTTTTTTTAAGGAATCACGACTAAAATAC
AATACTTGAAAGATTTGGGGGTTGAGTCAATCAATTTAAGTCCAATATTT
GAATCTCCTTTTGAAAACGATGGTAATGATGTTGAAAACTTTGAATCAAT
CAACTCAATTTATGGATCTATGCAAGACTTTAAGGATATGGTAACAGGGC
TTCAAGACCATGGCTTGAAATTAATTTTGGATTTTACACCCAATCATTCT
TCTGATAAACATCCATGGTTTACAAAATCTATACAAAAACAAGGACATTA
CTCCGATTATTATGTGTGGAAAAATGGGGATGCACCACCGAATAATTGGG
TACTTTTTATGACAGCTTAATTATGTATATTTCAAATGAATTGCTTGTAT
TTTATATATATATATTTAGTTGATGATTAATGGAGATCCTGCATGGAGCT
ATAATGAGGAGAGAGGAGAATGGTATTTTCACCAAATTGGAACAACACAG
CCCGATTTTAATCTCCGTAACCCCAGAGTCGTTAAGGAAATAAAAGATAT
TTTGAGGTTTTGGTTAGATTTAGGAGTTGACGGATTTCGTTTTAAATATG
TCGACTATTTGTTTGAGTGTAAGTAGGATCTTTTAAAATTAAACTTAAAT
ATTATTTATTTTGATAAGACAAATATTAATAGTATATTAACTTTGAGAAA
TAATACTTAATTACTATTCAATAAAGGTTTTTTTTTTTTTTTAATTTTAT
ATGTAAATATAGCTGTGTCGCTAGAAGATGAACCTGAAATTACATCAGAA
TTGGATTATTCGTCATTAAATCATACAAAAACCCATATATTGGAAGATAA
TCTTCAATTTTTGCTAGATATTAGAAAACTATTGGATGAAAAAACTGAAG
AGGATGAATCCAAACCAAGGTAACTACTAATTTTAAATAAGCAAGGATAT
GTATGTTTATAATATTTTTTCCTAAATAAGCTGCAATCGTCATAATGGCG
AAGAAATTATTAGAAGGTTTGCGGGTTTTTTTTTTTAAATTTAATGTGCA
TGTATTCAAATATTACCGATCATATTTTCCTTAAATTGTATGTATGTAAG
AATACTTTTACCATACCTCTGATGCAAGTTTTCCACCATCTGTTAATAAT
CCGACTTAACTAGTAAAATTTTCTCAAGTCAGACATTTTTTCAATACCAC
TGATCAAAATTTCACGTGAAAATATGTCTACCATGCACAATTTGACGACA
ATGTGTTGGATAGGTTAAAAATCTTCCGGTTTTGTTCTCTCTATAATTTT
TTTAATATAGTAAAACCCCTAGTGTGATGATATTTAGTTTATTCATAAGT
CTTAATATGCATAAAAAGATTCGCCTAGAAAATAAAATAAGTTATATGAA
TCAGTGCCTGTTTCAGAAGATGTGGACACCGGAGACCGGCCAACATAGGK
GTTGGCACAGGCAAACCTAGCAATATATGGCCTTTTATATGTAAAAATAG
ATCATATAGAAATTATTGGGAAAAAAACATAGTCTCAAATATTTGGGCAA
AATTAGTTGACCCCCTAAAAATTATAATCGTCTACACCTATGTCAGTCAA
GTAAAGGTATGATGGACCTTATTATTCTTGCAATTTATGATATGTTATCT
TTTAAGTACGGGATCCAAGCACATGTCTGCAATGGTCCATTCCTCCCTAA
AACCATCCCTAATATAATTGCTTGAAGTAGAAATTATTTGATTGAAACAC
AATTTTTGTAATTATAGTTAAGAGTTATTGTTAATAGAAAATCAAAATAT
GTAGGTTTATGCTTCTATAATGTATAATTAAATTATATTACTAAGTAATC
TTTTATAGGATTATGATGACGGACATCGAATCAAAGAATGCCATAAAATA
TTATGGTATGAATGGCTCAATTGCTCATATTCCACTGAATTATATTTCAT
TGGATAATCCGCTTAATGCAACCAATATTTATAACACAATAAATAAGTAT
CTAAAAGAGGTGAAAGGAGTTCCCACTGCTTGGCCCAACTTTATCTTCGA
CAATCATAAACACTCACGTTCTGGGACTTGGTTTGTTCTTAAACTTTTAA
TTTCATTTTAATATAATTGAACTACTTTAGGTTTGGATCCGAATTCATCA
ATTCTTTGAATATGATATTCATGCTTTTACCAGCCACTCCCATTACATAT
TATGGGGAGGAACTTGGAATGTTAGATATTGAAACGATTGGTTCTTCAAA
TATCGTAGGAAAGTCTCCGATGATCTGGTCAAAAGAAGAAGGAGCTGGAT
TTACGTATAACTCTTCTGTAACGCCTTGGATGCGAATTATGGATGGCTAT
GAAGATTTGAATGTTGAGTGCCAAGTGAAGGACCCAGATTCTTATTACTC
ATTTTATAAAGCATTGGCAAAGTTGAGATTAAGTGATGCGATACTTCAAG
GAGAGTTTAACTCTAAAGTTATTGATGGAGAAGTTTTCACGTATTCTGTG
GTCAAAAAAGGAAATCCAGGAATACTAGTGATTGTTAACTTCGGAGAGGC
CGWGTCAGACTCTGATATATCTAAGTTTAAATTTATGCCAGACTCGGGAT
CTGTGCTCTTGGGGACAAATACCTCGTCAACAGATCATGTTGGAGTAACT
AAAGTTAACTTTGACTCAATAAAATTAAGACCAAAAGAAGGAATGGTTAT
TTCATTTGTTGCTAATTTTGAATGA
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