EMLSAT00000012977, EMLSAT00000012977-708824 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012977
Unique NameEMLSAT00000012977-708824
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:1762963..1765729 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012977 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012977EMLSAG00000012977-695743Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058292EMLSAE00000058292-767220Lepeophtheirus salmonisexon
EMLSAE00000058293EMLSAE00000058293-767221Lepeophtheirus salmonisexon
EMLSAE00000058294EMLSAE00000058294-767222Lepeophtheirus salmonisexon
EMLSAE00000058295EMLSAE00000058295-767223Lepeophtheirus salmonisexon
EMLSAE00000058296EMLSAE00000058296-767224Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780871auto780871Lepeophtheirus salmonispolypeptide
EMLSAP00000012977EMLSAP00000012977Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012977

>EMLSAP00000012977 ID=EMLSAP00000012977|Name=EMLSAP00000012977|organism=Lepeophtheirus salmonis|type=polypeptide|length=282bp
MCFLKNIFEASDNHTGIRPLSDMKETDEKILLFNGDIDNQNYLESGSELM
SQDVTNNMEILTINKTCLILNCGGYSSENFSYLTTCLALDPNNSSNWMNA
ASLSTPRAYASSKNEIVIAGGWNGQYLKEIDLLKFNENGTVTDKWITFPV
LMKEPRSDAACVETQIGWERGILIAGGYDKMNTWKGSIEFYSYDEGKWKD
LDILPMLSTPRHYHGMSILNSIPIIFGGWNNGALSSIEFLDGKSDKSMNT
VTWRSRFDLNLTLRREKFGYTKIPSIFKDLKC
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mRNA from alignment at LSalAtl2s98:1762963..1765729+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012977-708824 ID=EMLSAT00000012977-708824|Name=EMLSAT00000012977|organism=Lepeophtheirus salmonis|type=mRNA|length=2767bp|location=Sequence derived from alignment at LSalAtl2s98:1762963..1765729+ (Lepeophtheirus salmonis)
ATGTGCTTCTTAAAAAACATCTTTGAAGCTTCAGACAATCACGTTATATA
TATCATCAAATTAACATTCATGGCTTATAAATTATATTGTAAATTTAATA
AATCATTGTGAAATCAATTTACTAACTGCTCATCTTGATTTGTTTTCCTT
TAGACTGGCATTCGACCTCTATCTGATATGAAAGAAACTGACGAAAAAAT
ATTGTTATTCAATGGAGACATCGACAATCAAAATTATTTAGAGAGTGGAT
CAGAGCTCATGTCCCAAGATGTCACAAATAATATGGAAATTTTGACAATT
AATAAAACATGCTTGGTTGAGAGTCATGGACTAATTCCAAGAATCGGCTC
GGMCGGAGMATATACAAAAGATAAAGTAAGTTTTAAAGTAATTCTTTTTT
CATATAAAAGTGAAATATTTTATGTTCAATCATTCTAGATTCTGAATTGT
GGTGGTTATTCATCGGAGAATTTCTCATATTTAACGACTTGTCTAGCCTT
AGACCCTAATAACTCAAGTAACTGGATGAATGCAGCTAGTCTTTCCACTC
CACGAGCATATGCGAGCAGTGTTAATATTTTAGAGCGAATTCTAATACTT
GGAGGATATGACTCTCATGAGGGGTTTCTTAGCTCTGTTGAAACATATAA
AAACGGAACATGGAGCATTTCAAATGAATTGACGATGTTGAAAGGAAAAT
CACACTTTTGTGCTCTGACTACTATGGTAATAAATTAAATAAGGAAGGCA
GATACTTGAAATATGCTGAAACATGGCCCTCTGTTCTGTTGGGAATGAGC
CATCCCTCACCTACTATGGGGGTTTCTGTTTTGGAGCCCCTAGCAGGCAA
GGGATGGCCTCGCTCGCCTCTCTCTCGTCTGCTAGGGGGTTTCTGTTTTG
GAATTTTTTGTCCTTTTCGGAACGGGGACTCAACTTGGTATTTTAATCAT
TTTTTGGTTCTCTAAACACGGATCCCTTGTGTACTATGTTCCGCATAGTT
ATTTGCTCTCTGCCTCCCTTTGTATATTCGGTTTTCTAGTACAAATATTT
ACATTCATATATAAAAATTTAAAAAGTTGATACATATATATGTAAAATAA
AATAAAAAAAATGTAGATTAAAGTAAAATATATCGGAACACAATTACAAA
TAATTTTTAGAATAGTTTAATATCGAAAATAATAGTTTAAAATGGCATCA
TGTTATTAAACGTCAGATCGCCATCCGATTAAAACTCTTGGAGAATACTT
GAAAATTTATAATTTATATATTTTTAAAATTTTAAAAACTTTTCCATATT
GCAATTCGATAAACCAATTGCCACACAGTATTTAATTAGATGTAAAAGAT
ATTGGGTAAGCCAATATTTAATTGAGAACAAGTATTTTTTTTAAATGAAT
TAATTAAACTAAGCTATTCACCAACTTTACCAACACTATGAATTAAGGAG
AGGGCTACAGTCTGAAAAAGAATATAACACTTAATGTTTTTAGACTAAAT
ACTACTTATCTAGTCGAAGAAAATTAAAAATATGTGAGTTGGTGCGCTCC
TATGACTGCTAGTGCGAATTCACACTGATTCGCTAACTAATATGCGTAAA
TTCTGAATAGAAAGGGGATGCACACTAAAATGAGGCTTATCACCTACAAT
TTTTTTGAATTTTGAAAGATAAAGCTTAAACCTTTGTCTATTAATGTGTT
TGGACCCGATGATTATACATATATATGCAATTTCATTTAAATATATATAT
ATTTATTGGGAACCCAAAGCCGATGAAATTTTGTAACAAGTAACTATAAA
GTTGGTATTAAGCAAAATTTTATAAAAATTTAAAACCCCCCGTTTTTTAA
ATGATAATTATATACAGTAAATATTGGTAATTTTAAACTCTGTTCCAATT
TTTGTTAGTTGATGATATTTTAGGATATACTATCTATTTCCTAAACGTTG
TATTTTAATTTAAAATTAGCTGAAAATAGTATTAATTGCATTACAAATTT
TTATCAGTAAATATATATTTCGATGAAATTGCACTTAAATATTTTAATTA
AGTTCATATATAATAACAAAAAAAAGTCAAGCTTGTTTGAAGCGTTGTAT
AACTAATTTATATTTGTCATACTTATAATTCCATAAAATTATAACTTTGA
CTGATTTTTTTAATAGAAAAATGAAATCGTTATTGCGGGTGGATGGAATG
GTCAATATTTAAAAGAGATTGATCTTCTAAAATTCAATGAAAATGGAACT
GTTACCGATAAATGGATCACCTTTCCAGTATTAATGAAGGAGCCACGATC
CGATGCAGCCTGTGTGGAAACTCAAATTGGATGGGAAAGAGGAATTCTAA
TAGCTGGAGGTTACGACAAAATGAACACATGGAAAGGATCTATAGAGTTT
TATAGCTATGACGAGGGTAAAATATTTACATAAAAAGTTACTGATTACTG
AGTAGTCTAAATATTGAGTATGTTATTTAAAAATTAATTTAATTCAATTG
TTAGGAAAATGGAAGGATCTTGATATCCTACCAATGTTATCCACACCTCG
TCACTATCATGGAATGTCTATATTAAACTCCATACCAATCATTTTTGGTG
GCTGGAACAATGGAGCACTTAGTAGCATTGAGTTTCTTGATGGAAAATCG
GACAAAAGTATGAATACAGTCACTTGGAGATCACGATTTGATTTAAATTT
AACACTAAGACGTGAAAAATTTGGATATACTAAAATTCCATCCATATTCA
AAGATTTAAAATGTTAA
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