EMLSAT00000012978, EMLSAT00000012978-708825 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012978
Unique NameEMLSAT00000012978-708825
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:176354..177842 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012978 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012978EMLSAG00000012978-695744Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058297EMLSAE00000058297-767225Lepeophtheirus salmonisexon
EMLSAE00000058298EMLSAE00000058298-767226Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773919auto773919Lepeophtheirus salmonispolypeptide
EMLSAP00000012978EMLSAP00000012978Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012978

>EMLSAP00000012978 ID=EMLSAP00000012978|Name=EMLSAP00000012978|organism=Lepeophtheirus salmonis|type=polypeptide|length=458bp
MRREEKKVVHILFNIFMSILFFGLVLGGNEETDEVLVGPNVCLMFTEDTV
SLNTSYHVVETKHNSYFCLKSITFRCSYSEDVMKTKYKMKNVTRTKSTRI
CCEGYELVDKQCIPSCKDNPCLKGICTEPGVCTCEAGYSGVDCSEVGCPD
PFTWGMDCSRVCDCERDLSSCNPKDGTCHCYPGYGGTTCNTLCPPNTYGQ
NCSKTCNCAHGSRTGFCACQPGYYGLRCQDHCPFGMKKGKCFKEPIPGEI
CACRDEIAMICDPVKGCVCQLEGACDMYTLPSFASNSQSVAKNNVQNTGA
ESASSSTIAVSVILVLVCMIVLCAALYYRRRFRRAQKDLDTRAALYFKPE
NSISNNYECILTKRNNIANNVREKNHTSKQQDLSSEPLPSTSNYHENTYE
EIGSPTKIKNNEQLAAYYKKDSKLPVDTILNDPLRYVMLNEPSPEKEEDS
DEKSKNKK
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mRNA from alignment at LSalAtl2s98:176354..177842-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012978-708825 ID=EMLSAT00000012978-708825|Name=EMLSAT00000012978|organism=Lepeophtheirus salmonis|type=mRNA|length=1489bp|location=Sequence derived from alignment at LSalAtl2s98:176354..177842- (Lepeophtheirus salmonis)
ATGAGGCGAGAAGAGAAGAAGGTCGTTCATATCCTATTCAACATTTTCAT
GTCCATTCTCTTTTTTGGACTCGTTCTTGGAGGAAATGAGGAGACGGACG
AGGTATTGGTTGGACCTAATGTGTGCCTTATGTTTACTGAAGATACCGTT
TCCTTGAATACGAGTTATCATGTCGTAGAAACAAAGCACAATTCCTATTT
TTGCTTAAAGTCCATAACCTTTCGTTGCTCCTATTCCGAAGATGTTATGA
AGACAAAGTATAAAATGAAGAATGTGACTCGTACCAAGTCCACCCGTATC
TGCTGTGAGGGCTATGAACTTGTGGACAAACAGTGCATCCCTTCTTGCAA
AGACAACCCTTGTCTGAAGGGAATATGTACAGAACCCGGAGTGTGTACTT
GTGAAGCGGGTTATTCGGGGGTGGACTGCTCGGAAGTGGGTTGTCCAGAT
CCCTTTACATGGGGAATGGATTGCTCACGCGTCTGTGACTGTGAAAGAGA
TTTGAGTTCATGCAATCCGAAAGATGGAACCTGTCATTGCTACCCTGGCT
ACGGGGGCACAACCTGTAATACTCTCTGTCCTCCAAACACGTATGGACAA
AATTGCTCTAAAACTTGTAATTGTGCGCATGGCTCACGTTGCCATCACGT
AACGGGCAACTGTGTCCCTTGCGATCCAGGATATTATGGAGAACATTGCA
AATTGCCTTGTGCTTGTGAATCAGAAGGNGACTTTGATATGTCATCCAGG
CACTGGGTTCTGCGCTTGTCAGCCAGGATACTATGGCCTTCGATGTCAAG
ATCACTGTCCTTTTGGAATGAAGAAGGGGAAATGTTTCAAAGAGCCTATT
CCTGGTGAAATATGTGCATGTCGTGATGAGATTGCTATGATATGCGATCC
CGTTAAAGGATGTGTATGCCAACTGGAAGGGGCTTGTGATATGTATACTC
TACCCTCTTTCGCCTCTAATTCTCAATCTGTGGCCAAAAATAATGTCCAG
AACACAGGAGCTGAATCTGCTTCATCCTCAACGATTGCAGTGTCCGTAAT
ACTCGTATTGGTATGTATGATCGTTCTCTGTGCTGCATTGTACTATAGAA
GAAGATTCCGGAGAGCTCAAAAGGATCTTGATACCCGCGCCGCCCTTTAT
TTTAAGCCTGAAAATTCAATTTCCAACAACTATGAATGCATTTTGACTAA
AAGAAATAATATTGCAAATAACGTCAGAGAAAAGAACCATACATCGAAAC
AACAGGATCTGTCCTCAGAACCACTTCCAAGTACCTCTAATTACCATGAA
AACACTTATGAAGAAATTGGTTCACCTACAAAAATAAAGAACAACGAACA
ACTTGCAGCTTATTATAAAAAGGACTCAAAACTACCAGTCGACACTATAT
TAAATGATCCTCTTCGATATGTAATGCTAAATGAGCCCTCTCCAGAAAAG
GAAGAGGACTCTGATGAAAAAAGTAAAAATAAAAAATAA
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