EMLSAT00000012991, EMLSAT00000012991-708838 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012991
Unique NameEMLSAT00000012991-708838
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s98supercontigLSalAtl2s98:701236..702531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012991 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012991EMLSAG00000012991-695757Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058349EMLSAE00000058349-767277Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779398auto779398Lepeophtheirus salmonispolypeptide
EMLSAP00000012991EMLSAP00000012991Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012991

>EMLSAP00000012991 ID=EMLSAP00000012991|Name=EMLSAP00000012991|organism=Lepeophtheirus salmonis|type=polypeptide|length=431bp
MAEFNETLIRDENDFVLKTILSVSTGCICPLILLGNLLVIIPFIQSHRVR
TPSNHLILYLAIVDLTFGIIMPFSCFLHNKEVFQRVFEGIQLGVSIASFS
FMVSIALDKAFSIAKPLRYTSVMTKINIQIYSVTLGLIAIATAVSLMCFI
PSDEKDFQILILGILLIPCVILVSASYFYIYSVASKHIQAMRQVEVSVRS
KERRDRLVLKSTNNNYCYQSSIEEHHSIFSSKKLSKKKNKRNYFKTKMPP
SSRYGVNLSLTVVLLLGSRLPGPLGTLLLGNYTGVLIRVLDVPLYLCSAF
NPWVYAYHNLELKKLMRRLMRKMKKRLCCSCCSMDPLSSISSHNSKTSKK
NLGNRRFFFTTVVLEGSFITNYQTSNHPTVGCSQFPTSPPIAPITSSTTH
SNKQSTKINNNIFNIASLYNLDTRNALGISV
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mRNA from alignment at LSalAtl2s98:701236..702531+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012991-708838 ID=EMLSAT00000012991-708838|Name=EMLSAT00000012991|organism=Lepeophtheirus salmonis|type=mRNA|length=1296bp|location=Sequence derived from alignment at LSalAtl2s98:701236..702531+ (Lepeophtheirus salmonis)
ATGGCTGAATTCAATGAAACTCTCATTAGGGATGAAAATGATTTTGTACT
CAAAACAATACTTTCCGTCTCCACTGGATGCATTTGTCCTTTAATACTCC
TAGGAAACCTATTGGTCATCATACCCTTCATACAAAGTCATCGAGTAAGA
ACACCGAGTAATCATCTGATTTTATACTTAGCCATTGTAGACCTTACTTT
TGGAATTATCATGCCCTTCTCATGCTTTTTACATAATAAGGAAGTGTTTC
AAAGAGTATTTGAAGGGATTCAATTGGGGGTTTCAATTGCTTCATTTTCG
TTTATGGTTTCAATTGCGCTAGATAAAGCGTTTAGTATAGCTAAACCTCT
ACGATATACTAGTGTTATGACTAAAATTAATATTCAAATATATTCCGTGA
CTCTTGGACTTATAGCAATTGCTACTGCTGTTTCCCTCATGTGCTTTATT
CCTAGTGATGAAAAGGACTTTCAAATACTTATTTTGGGCATTCTTCTCAT
TCCATGCGTTATCCTTGTATCAGCCTCCTATTTCTATATTTATAGCGTTG
CTAGTAAACATATTCAAGCTATGCGTCAAGTTGAAGTGTCTGTGCGGTCA
AAGGAGCGAAGGGATCGCTTAGTTCTTAAAAGTACAAATAACAATTATTG
CTACCAATCCAGTATTGAAGAGCATCACAGTATTTTTAGCTCCAAGAAGC
TGTCAAAAAAGAAAAATAAACGCAATTACTTTAAAACCAAAATGCCTCCC
TCATCCCGTTATGGAGTTAATCTCTCCCTAACTGTTGTCCTACTTTTAGG
ATCTCGTCTTCCAGGTCCACTTGGAACTCTTTTATTAGGAAATTATACTG
GGGTATTGATCCGCGTCTTGGATGTTCCTCTCTATCTATGCTCCGCCTTT
AATCCTTGGGTATACGCTTATCATAATTTGGAACTGAAGAAATTGATGCG
ACGATTAATGAGGAAAATGAAGAAAAGGCTTTGTTGCTCATGCTGTAGTA
TGGATCCACTATCCTCAATATCCTCTCATAACTCAAAAACCAGCAAAAAA
AACCTCGGAAATCGAAGATTTTTCTTCACTACAGTTGTTCTAGAAGGCAG
TTTCATAACAAATTATCAAACATCAAATCATCCCACCGTTGGATGCTCAC
AGTTCCCTACATCTCCTCCTATAGCGCCTATAACGTCGTCAACAACTCAT
TCAAATAAACAATCTACAAAAATCAACAACAATATTTTCAATATTGCATC
ACTCTACAATCTTGATACTCGAAACGCACTTGGAATATCAGTTTAA
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