EMLSAT00000013027, EMLSAT00000013027-708874 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000013027
Unique NameEMLSAT00000013027-708874
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s999supercontigLSalAtl2s999:31594..34416 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000013027 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000013027EMLSAG00000013027-695793Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058529EMLSAE00000058529-767457Lepeophtheirus salmonisexon
EMLSAE00000058530EMLSAE00000058530-767458Lepeophtheirus salmonisexon
EMLSAE00000058531EMLSAE00000058531-767459Lepeophtheirus salmonisexon
EMLSAE00000058532EMLSAE00000058532-767460Lepeophtheirus salmonisexon
EMLSAE00000058533EMLSAE00000058533-767461Lepeophtheirus salmonisexon
EMLSAE00000058534EMLSAE00000058534-767462Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769933auto769933Lepeophtheirus salmonispolypeptide
EMLSAP00000013027EMLSAP00000013027Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000013027

>EMLSAP00000013027 ID=EMLSAP00000013027|Name=EMLSAP00000013027|organism=Lepeophtheirus salmonis|type=polypeptide|length=758bp
MEIDEIEFERMMEDEMDVMREVEAEKFKKSLFNDSSLKRKDISFPSSQED
EDEAGIPIHRPLKKSKVIIEDTNEESENVRYLNLSVDEESHSRSYYCVRL
KNESLSQPSPKYIQNTHLNDRPFNEIFEMALEIKSRKSSILMERRQNPPS
TSTQSQSLWVETYKPSHFMHLLSDDTINRSLLQWMKLWDKMVFNKPVKAD
LIDETHRPAPRIVLLHGPPGIGKTTLAHILARHAGYNPIEINSSDDRTIS
AFKSKVXPAIQMQSVLSVESKPNCIIIDEIDGVPAPTIKYLVDLSNDKNK
SVGTLKRPIICICNDVYIPSLRPLKQISKVIMFPPISSHRLVERLKFISS
KEKLYTDQSTLAVICEKTNNDIRSCLSTLQFFKARGVQRVHLKDVQSASI
GMKDMNKSNFFIWEKIFELSRGGKKSSNRSEDVVDGSXKGRYSSIYQIVN
GFGDYDRLMNGVFDNYLDMKFRDTRFENVSKANEWMXFFDICQRRIHQSQ
IYTLMSYSAFPFVGAHFALASHSKTRINFPTAQKEHLNKLNRSINLTTVC
MSEMSPLIRIFISNDTLIRDILPCLFEILNPDLRSLNTQLYSPREKKVFK
ELISIMISYNITFTQEKSPTGQYLYRYDPSLDEVAHFPGIKHSMFSYSVQ
QVVSHEISIEKXRRRDKNEASTLKAPVQNKEETKKKELVKKDDEPADPVD
FFNRKIPREIVEAREKDKKNNALISGVIFVFKEGYNNAVRRTEIELFKNE
CYVSNIII
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mRNA from alignment at LSalAtl2s999:31594..34416-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000013027-708874 ID=EMLSAT00000013027-708874|Name=EMLSAT00000013027|organism=Lepeophtheirus salmonis|type=mRNA|length=2823bp|location=Sequence derived from alignment at LSalAtl2s999:31594..34416- (Lepeophtheirus salmonis)
ATGGAGATTGACGAAATTGAGTTTGAACGCATGATGGAGGATGAAATGGA
TGTAATGAGGGAAGTAGAGGCGGAAAAGTTCAAAAAATCTCTTTTTAACG
ACTCTGTAAGTCACTGCAATCAAATTTAATGATGAATTCAACTAAATAAC
GCAACAGTCTTTTACAGAGTTTGAAACGAAAGGATATTTCGTTTCCTTCA
TCTCAAGAGGATGAAGATGAGGCCGGGATCCCCATTCATAGGCCACTAAA
AAAGTCTAAAGTAATAATTGAGGACACGAATGAAGAATCGGAGAATGTCC
GTTATTTGAATCTATCCGTTGATGAAGAGAGTCACTCTCGGAGCTATTAT
TGCGTCCGTCTGAAAAATGAATCCCTTTCTCAGCCATCCCCTAAATACAT
TCAAAATACTCATTTAAATGATCGACCCTTCAATGAAATTTTTGAGATGG
CATTAGAAATTAAGTCTCGCAAAAGTTCTATCCTTATGGAGAGAAGGCAA
AACCCTCCTTCCACCTCGACTCAGTCTCAATCCCTTTGGGTTGAAACCTA
CAAACCCTCACATTTTATGCATCTCCTCTCTGATGATACTATTAATCGAT
CATTGCTTCAATGGATGAAACTCTGGGATAAAATGGTGTTCAATAAGCCT
GTGAAAGCGGACCTCATTGATGAGACGCATCGTCCGGCACCACGTATTGT
ACTCCTTCATGGACCACCTGGTATTGGTAAAACCACATTGGCTCATATCC
TTGCACGTCATGCTGGCTATAATCCTATAGAAATTAATTCCTCTGATGAT
CGTACCATCAGTGCCTTTAAGTCTAAAGTTGAKCCAGCCATCCAAATGCA
GTCTGTGCTCTCTGTAGAGAGCAAACCTAACTGTATAATTATCGATGAAA
TTGACGGTGTTCCTGCCCCTACAATTAAATACTTGGTGGATCTTTCAAAC
GATAAAAATAAAAGTGTTGGAACTCTAAAAAGACCGATAATATGTATTTG
CAATGATGTGTATATTCCATCTCTTCGACCTTTAAAACAAATATCCAAAG
TGGTGAGAAATTTCCTTTATTTTTTGGTTTTTTTATGATGAACAACCCGC
TTTCCAGATCATGTTTCCTCCAATCTCTTCACATCGACTTGTTGAACGGC
TCAAGTTCATTTCATCTAAAGAAAAACTCTATACAGACCAATCCACTCTC
GCAGTTATCTGCGAGAAAACAAACAATGATATCCGTTCTTGCTTGTCCAC
CTTACAGTTCTTCAAGGCTCGAGGTGTTCAAAGAGTTCATTTAAAAGATG
TGCAAAGTGCAAGCATTGGCATGAAAGATATGAATAAATCCAATTTTTTC
ATTTGGGAAAAAATATTTGAGGTAAAATTGTTCGAAACGATCTTAGGTGT
AGTTTGAGATTTGTACAAGGGGTCATTTTTTAAAATTCACATACTAGATA
TATAATAAATCTTGAATACCCTCCCTCGCCTATGGATGTGACTTGATTAA
TATATTTTCTTTTGAAAATAGTTATCCAGAGGAGGGAAAAAATCATCCAA
CAGATCTGAGGACGTAGTGGATGGSTCCRCAAAGGGYCGATACTCTTCAA
TCTATCAAATTGTAAATGGATTTGGCGATTATGATCGTCTCATGAATGGT
GTTTTCGACAACTATTTGGACATGAAGTTTAGAGATACTCGTTTTGAAAA
TGTATCCAAGGCAAATGAGTGGATGGMCTTCTTTGATATTTGTCAGAGAC
GTATCCATCAAAGTCAAATATACACGCTAATGAGCTATTCAGCTTTTCCA
TTTGTGGGAGCTCACTTTGCACTTGCGTCTCATTCCAAAACCCGAATTAA
TTTCCCTACAGCACAAAAAGAACACTTAAATAAGTTGAATAGATCCATCA
ATTTGACTACGGTGTGCATGTCGGAAATGAGCCCTCTTATTAGGATTTTT
ATATCGAATGATACTCTTGTAAGTTGAAAAAAGATGAAGAGGGTAGGATT
TGAAGAAGCTCATTTGATTTTATCTTCTTTTCAGATTCGGGATATTCTAC
CATGTTTATTTGAAATATTAAATCCTGACTTAAGATCTCTCAATACTCAA
TTGTACTCACCTCGTGAGAAAAAGGTGTTTAAGGAGCTGATCTCCATTAT
GATATCTTATAATATCACTTTTACACAAGAGAAATCGCCTACCGGACAAT
ACCTTTATCGATACGATCCCTCCTTGGACGAGGTTGCGCATTTCCCTGGG
ATTAAGCATTCAATGTTCTCCTACTCTGTTCAACAAGTTGTGTCGCATGA
AATTTCAATCGAAAAAAMGAGGCGTCGCGATAAGAATGAAGCCTCCACAT
TAAAGGCTCCGGTGCAAAACAAAGAAGAAACGAAAAAGAAGGAACTCGTT
AAAAAAGACGATGAACCTGCGGATCCCGTTGATTTCTTTAATCGTAAAAT
CCCTAGAGAGATAGTTGAGGCCAGAGAAAAGGACAAGAAAAACAATGCAT
TGATTAGTGGTGTAATTTTTGTTTTTAAGGAAGGTTACAACAATGCCGTT
AGGCGAACAGTAAGGATCTCGGATTTTCTATGACTCGGAACGATTAAGGA
TATACGATGTGATTGATCTAGTATTCAATAATATTTATCTGAATTGTTAT
ACTTTAAAATTTTACCTAATTATACTTACTTTTAACGGCGGCGTTTCCGC
AAATAAAACTATATTAATTATACAAATTATTTTTGTAATCCATTTACAAA
TTTTTAATAATTTAATTAGTAGGAAATTGAACTCTTCAAGAATGAATGCT
ATGTATCGAATATTATAATTTGA
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