EMLSAT00000013069, EMLSAT00000013069-708916 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000013069
Unique NameEMLSAT00000013069-708916
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s9supercontigLSalAtl2s9:782752..783681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000013069 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000013069EMLSAG00000013069-695835Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000058733EMLSAE00000058733-767661Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779692auto779692Lepeophtheirus salmonispolypeptide
EMLSAP00000013069EMLSAP00000013069Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000013069

>EMLSAP00000013069 ID=EMLSAP00000013069|Name=EMLSAP00000013069|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
MDRLLRLTSSSGAGAGGNTDVPVVDTXEQVYISSLALLKMLKXGXAGVPM
EVMGLMLGEFVDEYTVRVFDVFAMPQSGTGVSVEAVDPVFQARMLEMLRA
TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSV
KGKXXIDAFRLIHPNIVAINTDPRQTTSVLGHLTKPSIQALIHGLNRHYY
SISINYRKNELEQRMLMNLNKKSWIDGLTLTDYHQHGTQNQETVKDMVNL
AKNYDKALEEEEKMSAQELAIKNVGKQDPKRHLEEKVDVLMTRNIVQCLG
AMLDAIVFK
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mRNA from alignment at LSalAtl2s9:782752..783681+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000013069-708916 ID=EMLSAT00000013069-708916|Name=EMLSAT00000013069|organism=Lepeophtheirus salmonis|type=mRNA|length=930bp|location=Sequence derived from alignment at LSalAtl2s9:782752..783681+ (Lepeophtheirus salmonis)
ATGGATCGTTTGCTCCGGTTAACGAGTTCTTCTGGTGCAGGAGCAGGAGG
GAATACGGATGTGCCCGTGGTGGACACTGSGGAGCAGGTCTACATCTCTT
CCTTGGCCCTCCTGAAGATGTTGAAGCRCGGTSGAGCCGGTGTGCCCATG
GAGGTGATGGGGCTCATGTTGGGGGAGTTTGTGGATGAGTACACAGTGCG
TGTCTTTGACGTGTTTGCCATGCCTCAATCCGGAACGGGTGTATCCGTAG
AAGCCGTGGACCCCGTATTCCAGGCTCGAATGTTGGAGATGCTCCGCGCC
ACGGGTCGTCCAGAGATGGTGGTGGGTTGGTATCACTCACATCCCGGCTT
TGGGTGCTGGCTCTCGGGAGTGGACATCAACACGCAACAGAGTTTCGAAG
CCTTGAGTGAACGCGCCGTGGCTGTGGTTGTGGATCCCATTCAGTCCGTG
AAAGGGAAAGKGGKGATTGACGCCTTCAGACTCATCCATCCCAACATCGT
GGCCATCAACACAGACCCACGACAAACCACCTCCGTTCTTGGACATCTTA
CTAAACCCTCGATCCAAGCCCTTATCCACGGCCTCAATCGCCACTACTAC
TCCATCTCCATCAATTATCGCAAAAACGAACTTGAGCAGCGAATGCTCAT
GAATCTGAACAAAAAGTCATGGATTGACGGTCTCACTCTTACAGACTACC
ATCAGCACGGCACTCAAAACCAGGAAACCGTCAAAGATATGGTCAACCTT
GCCAAAAACTACGATAAAGCTCTTGAAGAAGAAGAAAAAATGAGTGCACA
GGAATTGGCTATCAAGAACGTGGGGAAACAAGATCCCAAGCGTCATTTAG
AAGAAAAAGTGGATGTTCTCATGACCCGTAACATTGTTCAGTGCTTAGGA
GCTATGCTCGATGCCATTGTTTTCAAATAA
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