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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | PRINTS | PR00344 | BCTRLSENSOR | coord: 297..311 score: 34.15 coord: 379..392 score: 30.68 coord: 355..373 score: 34.57 |
IPR003594 | Histidine kinase-like ATPase, ATP-binding domain | SMART | SM00387 | HATPase_c | coord: 251..395 e-value: 3.6E-4 score: 29.9 |
IPR003594 | Histidine kinase-like ATPase, ATP-binding domain | GENE3D | 3.30.565.10 | | coord: 212..395 e-value: 2.2E-50 score: 169.9 |
IPR003594 | Histidine kinase-like ATPase, ATP-binding domain | PFAM | PF02518 | HATPase_c | coord: 253..393 e-value: 1.1E-18 score: 66.7 |
IPR003594 | Histidine kinase-like ATPase, ATP-binding domain | SUPERFAMILY | 55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | coord: 208..391 |
IPR018955 | Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal | GENE3D | 1.20.140.20 | | coord: 36..209 e-value: 1.0E-47 score: 161.7 |
IPR018955 | Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal | PFAM | PF10436 | BCDHK_Adom3 | coord: 62..208 e-value: 1.7E-37 score: 128.3 |
IPR018955 | Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal | SUPERFAMILY | 69012 | alpha-ketoacid dehydrogenase kinase, N-terminal domain | coord: 45..199 |
None | No IPR available | PANTHER | PTHR11947:SF4 | 3-METHYL-2-OXOBUTANOATE DEHYDROGENASE KINASE | coord: 16..398 |
None | No IPR available | PANTHER | PTHR11947 | PYRUVATE DEHYDROGENASE KINASE | coord: 16..398 |
IPR005467 | Signal transduction histidine kinase, core | PROSITE | PS50109 | HIS_KIN | coord: 256..395 score: 17.041 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000059 ID=EMLSAP00000000059|Name=EMLSAP00000000059|organism=Lepeophtheirus salmonis|type=polypeptide|length=405bp MSWNRLAIRGGKFFLRRNIHFTKNDKYASLRYKAATVSSFYNQAEIDKAA SEPSIRLTPTTIMYAGNSSDGLHILRSAQYLQKELPVRLAHIISGMRNLP FIVGCNPIILSIHEQYIHSFQILTDFPTIKTVEDEEQYSQLLRRLLDEHK TVISQLAKGFKECSKYIKDEEIIKKYLDYNLTARLSIRMLVTHHLHLKDK VKDHVGIVNIDMNLKKIIEKWATFVSMISHEKFGVCPNIRISGHINAHFP YLEMPLDYIIPELLKNATRAVIEAHPGSKSSKLPPIIVTLASNDVDFAVK ISDRGGGIPPKKLKKIMQYHFTDAERSTDAQIDQSGNLLDSIVDTMNMTT SGPMYGYGFGLPTSRAYTEYLGGSLSIESLPGLGTDVYLRLKHFSSKDDP NPFRV back to top
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