EMLSAP00000000074, EMLSAP00000000074 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000074
Unique NameEMLSAP00000000074
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length740
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAAcoord: 51..244
e-value: 6.1E-12
score: 55.7
NoneNo IPR availablePFAMPF12698ABC2_membrane_3coord: 344..732
e-value: 1.2E-37
score: 129.6
NoneNo IPR availableGENE3D3.40.50.300coord: 21..251
e-value: 2.8E-58
score: 196.6
NoneNo IPR availablePANTHERPTHR24220FAMILY NOT NAMEDcoord: 23..268
NoneNo IPR availablePANTHERPTHR24220:SF194ABC TRANSPORTER ATP-BINDING PROTEINcoord: 23..268
NoneNo IPR availableTMHMMTMhelixcoord: 684..703
NoneNo IPR availableTMHMMTMhelixcoord: 655..677
NoneNo IPR availableTMHMMTMhelixcoord: 343..365
NoneNo IPR availableTMHMMTMhelixcoord: 713..735
NoneNo IPR availableTMHMMTMhelixcoord: 594..616
NoneNo IPR availableTMHMMTMhelixcoord: 545..567
NoneNo IPR availableTMHMMTMhelixcoord: 623..645
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 44..185
e-value: 8.0E-29
score: 100.5
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 24..259
score: 19.928
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 158..172
IPR000412ABC-2 transporterPROSITEPS51012ABC_TM2coord: 510..739
score: 21.701
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..251

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000074 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000074EMLSAT00000000074-695921Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000074 ID=EMLSAP00000000074|Name=EMLSAP00000000074|organism=Lepeophtheirus salmonis|type=polypeptide|length=740bp
MKKDFDPLYSEKNPLALLKAKLAIWIRNAYKHFGTKSNTSLFTGLNMSVP
KGVIYGLLGPSGCGKTTLLRVITGREKLNSGEFKIFGEDPGTVGLEVPGR
RIGYMPQDLALYMELTILETLFFYGRLNKMQTSKIRSRAETLIEILELPH
SGRLVQNMSGGQRRRISLAVALLHEPELLVLDEPTVGVDPVLRQYIWDHL
LTIVNNSSKKRTIIITTHYVEEARQAHIVGMLRYGKILDEDAPTKLLEKF
KALTLEEVFYELCQQEQRVICEGSEDEEESFLMSRNQRNSSLSSDSKFRR
RDAFSISIEAPKKHFFPQMSSFFAIHRWKALVIKNFLRMFRKIGFLIFQL
IFPAIQASAFCIAIGKDIKGMTVAVVNEEATYQECQNNYAGCILSFQSSK
YVTMSKTSDLQDNLSCRLLYYIERGELDIKYYDDFETARNKVLNGDHWGV
IHFEKGFSKKLAEEMHFIVSEPYAKDKEINTRMHIYLDMTNQQISLSIKQ
SLHSSADEFLKESLRACNKSEELGNSLLYFGNTIYGSNKPSYTEFMAPGI
ILSIAFFMAVGLTSQSFVTERREGLLERSFATGVTTLEVMLAHMVAQFII
MILQVTFVLLFMILVFKIPANGSIVXMISXVILQGLCGXSFGLLISSFCS
TEHDAIQLALGSFYPLLLLSGIIWPLEGMSKNLRYFSYTLPQTLACKAMR
GILSRGWNLEWSIVYLGFIVTIAWIFIFQILSLLLFRIRK
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