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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR004836 | Sodium/calcium exchanger protein | PRINTS | PR01259 | NACAEXCHNGR | coord: 680..693 score: 84.96 coord: 641..653 score: 49.39 coord: 667..679 score: 67.61 coord: 654..665 score: 59.21 |
IPR003644 | Na-Ca exchanger/integrin-beta4 | SMART | SM00237 | Calx_beta | coord: 325..423 e-value: 3.6E-26 score: 103.0 coord: 441..540 e-value: 3.1E-23 score: 93.2 |
IPR003644 | Na-Ca exchanger/integrin-beta4 | PFAM | PF03160 | Calx-beta | coord: 330..422 e-value: 1.0E-25 score: 89.4 coord: 442..539 e-value: 6.2E-22 score: 77.3 |
IPR004837 | Sodium/calcium exchanger membrane region | PFAM | PF01699 | Na_Ca_ex | coord: 66..225 e-value: 3.4E-26 score: 91.4 coord: 646..831 e-value: 4.1E-20 score: 71.6 |
None | No IPR available | PANTHER | PTHR11878:SF16 | SUBFAMILY NOT NAMED | coord: 37..841 |
None | No IPR available | PANTHER | PTHR11878 | SODIUM/CALCIUM EXCHANGER | coord: 37..841 |
None | No IPR available | SUPERFAMILY | 141072 | CalX-like | coord: 334..456 |
None | No IPR available | SUPERFAMILY | 141072 | CalX-like | coord: 452..569 |
None | No IPR available | TMHMM | TMhelix | | coord: 56..78 |
None | No IPR available | TMHMM | TMhelix | | coord: 706..728 |
None | No IPR available | TMHMM | TMhelix | | coord: 177..199 |
None | No IPR available | TMHMM | TMhelix | | coord: 209..228 |
None | No IPR available | TMHMM | TMhelix | | coord: 148..170 |
None | No IPR available | TMHMM | TMhelix | | coord: 812..834 |
None | No IPR available | TMHMM | TMhelix | | coord: 619..641 |
None | No IPR available | TMHMM | TMhelix | | coord: 645..667 |
None | No IPR available | TMHMM | TMhelix | | coord: 777..799 |
None | No IPR available | TMHMM | TMhelix | | coord: 111..133 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000114 ID=EMLSAP00000000114|Name=EMLSAP00000000114|organism=Lepeophtheirus salmonis|type=polypeptide|length=842bp MATSFLSENKTSVCFFHNETATDPEYCGSKDVCSTLGILLPLFLEMSWPA PVRTFLYLFALLYSFLGVSIIADIFMCAIEKITSKTKRIHFASAGDDEPD VIEVPVWNGTVANLTLMALGSSAPEILLSIIEITGNNFEAGELGPGTIVG SAAFNLLAISAVCVASIPSGEIRRVKQIIVFMVTSTFSIFAYVWLLVILK WNTPNVVDLWEAILTFAFFPILVIIAYAADKQWLRYLVCKKPVEESDKKR QIELGMFRPGEESIIVDSTPHSRMWYRIGAVRNMTGGRKTQPSLRMNEKL KEESEGAYKEQVYDAINENPEAPNISYPDEDEDTAIVEFHASSASVMENI GTYNVTVVRHGKLDSTIKVRIETIDGSANEGEDYVGVNEILTFEPYETQK EIGITIVDDNQWEPDEEFFVKLALLYRSDADGVKLGKSSIMEITILNDDE PGIITFEKRGILVKESCLEAEISVIRRNGADGRVTAKWKTIDKTAINGKD FKGGEGELEFNHGETHRTIAIPIVNDMDFEKDENFEVELFEATGGAKIGK INRTAVTITNDDDFTSMMSKMMTMTSYNVDGMRVHNETWAQQFKDAMNVN GGDIEGATLIDYIMHFMTFGFKIIFAFVPPPGVGGGWPCFFISLGMIGIL TAXVGXLASIFGCLVGLKPSITAITFVALGTSLPDTFASKAAAVGEKHAD NAIGNITGSXSVNVFLGLGLPWLMAAIYHKTQXCYSFGISTLCIFCYCHD FEEVASKRQECNCQDGQFNVPAGDLSVSVTLYTICAVLAVLLLLVRRFLG IFGNAELGGPNLGKYISATFLLILWFLYILFSTLQTYGIISL back to top
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