EMLSAP00000000133, EMLSAP00000000133 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000133
Unique NameEMLSAP00000000133
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length615
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013283ABC transporter, ABCEPRINTSPR01868ABCEFAMILYcoord: 38..53
score: 68.5
coord: 66..90
score: 76.48
coord: 121..146
score: 78.31
coord: 93..113
score: 62.1
coord: 154..170
score: 61.41
coord: 170..196
score: 58.96
IPR003593AAA+ ATPase domainSMARTSM00382AAAcoord: 116..308
e-value: 9.0E-8
score: 41.8
coord: 386..555
e-value: 9.5E-10
score: 48.4
NoneNo IPR availableGENE3D3.40.50.300coord: 115..305
e-value: 6.0E-28
score: 97.3
NoneNo IPR availableGENE3D3.40.50.300coord: 385..552
e-value: 4.1E-32
score: 110.8
NoneNo IPR availableGENE3D3.30.70.20coord: 20..85
e-value: 2.0E-9
score: 36.2
NoneNo IPR availablePANTHERPTHR19248ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 10..615
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 21..155
IPR0014504Fe-4S binding domainPFAMPF00037Fer4coord: 63..84
e-value: 1.2E-7
score: 30.9
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 116..259
e-value: 3.7E-14
score: 53.0
coord: 383..506
e-value: 1.5E-17
score: 64.1
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 357..578
score: 14.526
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 93..330
score: 12.205
IPR007209RNase L inhibitor RLI, possible metal-binding domainPFAMPF04068RLIcoord: 21..51
e-value: 7.1E-15
score: 54.1
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 69..80
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 60..89
score: 10.465
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 21..51
score: 6.559
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 115..304
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 384..551

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000133 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000133EMLSAT00000000133-695980Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000133 ID=EMLSAP00000000133|Name=EMLSAP00000000133|organism=Lepeophtheirus salmonis|type=polypeptide|length=615bp
MPPKTNQRKKKDSSVNSELTRIAIVNADRCKPKRCRQECKKSCPVVRMGK
LCIEVSPNSKIATISEELCIGCGICVKKCPFEAVVIINLPSNLETETTHR
YSANSFKLHRLPVPRPGVVLGLVGTNGIGKSTALKILAGKQKPNLGLFNE
PPDWSDILHYFRGSELQNYFTKILEDNLKAVIKPQYVDQIPKAVKGSVQS
LLDKKDEMNNQNSVANLLDLSPQVRQRKVDELSGGELQRFACAMVCIQKA
DIFMFDEPSSYLDVKQRINASQAIRNLMHPSKYIIVVEHDLAVLDYLSDF
ICCLYGVPGAYGVVTLPSGVREGINIFLDGFIPTENLRFRQENLIFKVSE
NATEEEVKRMSSYNYPTMSKTMGTFKLSVQAGNFSDSEILVMLGENGTGK
TTFIRMMAGKLEPDTGSGEIPQLNISYKPQKISPKSQGTVRTLLHEKIRD
AYIHPQFVADVMRPMKIDDIIDQEVQNLSGGELQRVALTLCLGKPADVYL
IDEPSAYLDSEQRLVAAKVIKRFILHAKKTGFVVEHDFIMATYLADRXIV
FEGLPSIDTRANCPQSLLTGMNKFLSQLAITFRRDPNNYRPRINKMNSQN
DSMQKAAGNFFFLED
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