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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PRINTS | PR00014 | FNTYPEIII | coord: 980..998
score: 31.16
coord: 1105..1119
score: 43.06
coord: 728..737
score: 35.92
coord: 742..752
score: 40.34 |
| None | No IPR available | PANTHER | PTHR19897 | COILED-COIL DOMAIN-CONTAINING PROTEIN | coord: 543..1230 |
| None | No IPR available | PANTHER | PTHR19897:SF73 | SUBFAMILY NOT NAMED | coord: 543..1230 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 834..934 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 1143..1232 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 289..363 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 188..291 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 545..613 |
| None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 66..157 |
| IPR003961 | Fibronectin, type III | SMART | SM00060 | FN3 | coord: 609..695
e-value: 6.6E-9
score: 45.6
coord: 714..809
e-value: 4.8E-11
score: 52.7
coord: 930..1011
e-value: 1.9E-11
score: 54.1
coord: 1029..1118
e-value: 2.1E-12
score: 57.2 |
| IPR003961 | Fibronectin, type III | PFAM | PF00041 | fn3 | coord: 932..1012
e-value: 1.2E-14
score: 54.0
coord: 1030..1121
e-value: 4.7E-13
score: 48.9
coord: 715..812
e-value: 8.3E-12
score: 44.9
coord: 610..697
e-value: 5.7E-9
score: 35.8 |
| IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 609..704
score: 16.607 |
| IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 714..818
score: 18.997 |
| IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 930..1020
score: 19.91 |
| IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 1028..1127
score: 20.529 |
| IPR003961 | Fibronectin, type III | SUPERFAMILY | 49265 | Fibronectin type III | coord: 607..817 |
| IPR003961 | Fibronectin, type III | SUPERFAMILY | 49265 | Fibronectin type III | coord: 928..1122 |
| IPR003599 | Immunoglobulin subtype | SMART | SM00409 | IG | coord: 1143..1231
e-value: 0.01
score: 25.1
coord: 190..288
e-value: 20.0
score: 8.8
coord: 301..387
e-value: 21.0
score: 8.7
coord: 72..158
e-value: 30.0
score: 7.3 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 710..827
e-value: 3.2E-25
score: 87.8
coord: 918..1022
e-value: 4.6E-26
score: 90.6
coord: 1023..1128
e-value: 4.4E-25
score: 87.4 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 615..709
e-value: 1.8E-18
score: 66.1 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 66..192
e-value: 5.4E-12
score: 45.0
coord: 536..614
e-value: 1.0E-9
score: 37.6 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 1158..1230
e-value: 2.1E-18
score: 65.7
coord: 829..869
e-value: 2.1E-18
score: 65.7
coord: 903..909
e-value: 2.1E-18
score: 65.7 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 304..363
e-value: 1.3E-5
score: 24.6 |
| IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 193..280
e-value: 6.6E-8
score: 31.9
coord: 413..501
e-value: 1.5E-6
score: 27.6 |
| IPR013098 | Immunoglobulin I-set | PFAM | PF07679 | I-set | coord: 68..153
e-value: 5.0E-9
score: 35.7
coord: 835..925
e-value: 6.1E-6
score: 25.8
coord: 1143..1230
e-value: 4.2E-14
score: 52.0 |
| IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 1120..1229
score: 7.395 |
| IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 292..409
score: 7.831 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000141 ID=EMLSAP00000000141|Name=EMLSAP00000000141|organism=Lepeophtheirus salmonis|type=polypeptide|length=1275bp
MPHANPLLKYFKQSDKKPELKPPEDAMKSGERKASLVLSDGLTMNEDVEW
EWENESIPLRPEGKVPKLVNPQDKWSCGEGDNGYVIFQIEGDPLPEIQWF
KGFKDLSVEPRYKTWTNGVENTIILGIHSARQEEEGDYKVLLKNRYGEHE
FEFKYFVTVEGGMDFRAMLLKRKKVQRKVEVKVHDWIETPVDQEVQENKV
DKVVLTARLSIPNVKGKWYLRNAASLRSIKSTDYGLELHKSERFEWIHRE
DSYTLIVHNPTIEESGKFTLVAKTENQTFTTGGHVEVIPPDPEFYFEKKL
MTKKTGLTNRSVKFNCILNEAGANIRWTRNGAPLPLHPRYERSVRGEKLG
LVMNQLELDDAGVIGXEILEYVKDGEDDVTSCKLIVEGDAGEITCATNKD
SSSSTLRVAHDNKFVSEVSSQNEGVERESYVFNVQVKDPSAPVDFFLNGK
IIVPGADTRMEVKQMGDGKHQLIVHYITMEDYGQIEARTPTNHGDKTVSC
TGSFNVIMGEKAPKLGDCGPVSGVAHKDCNWGVSYAVEGYKQSDIELSVF
KDGKEVKVGQDVNINFHGDRVDLNVINPKREKSGSYKIIIRNAQGFDERL
INVNIMDKPDPPKTIEVTHISKNSCVVKLSPPDDDGGTEIKHYIIEAIDV
SSSSNQWSQVAQADGKGPKSIKVNNLINKHRYRFRARAANRIGLSDPHEI
SGQDIIIKDPWDEPDKPGRPSVLDWSSNSCDLAWALPESDGGAPITHYEI
EYKEKSMGLWQQGEILNTSDIEIKTDVNGKPMVHGTCKGLVEGNEYVFRI
KAVNKGGASLPSETSDSVLAKTRYLKPFLHQPGIYNIEIKKGRTFRYDIW
FGGEPAPSVTWERNGSLLLGDSDRISIELFSKKTVYCEKNTVLTVTKANR
SIDTGHYTIKLLCDGGTQQATGYVNVLDVPEKPRXLNPDEIRAEHINLSW
ATPHDDGGTPITSYVIKMMDIDNGDWLXAMETKDTKATVKGLKPGHIYQF
EVIAVNKEGESEPCRTLEPIKAENPYKPPSEPKEPNIVDFDNQSVTLRWQ
KPSDDGGRPITHYIIQKKDKFGGWFDALKTDDASCEARIDELEARIPGLS
EGKWYQFRIIAVNKAGESSPSFETKPHLCRHKNLTPSIDKGSSSSKTIKV
NRTAIWQIKVKGEPPPEFTWYKNGIQIASTDEVLITREEYQGGATAKLCV
SKSQMIDAGTYSLVAENRNGQDKTDLDLIVLDLMQECECDMFKTGDLECN
CSNGFRHGEVGGKHLLEIDFGNGYL back to top
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