EMLSAP00000000146, EMLSAP00000000146 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000146
Unique NameEMLSAP00000000146
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1514
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_TYPcoord: 970..992
e-value: 0.18
score: 20.9
coord: 948..969
e-value: 200.0
score: 2.7
coord: 993..1016
e-value: 0.25
score: 20.4
NoneNo IPR availablePFAMPF13855LRR_8coord: 972..1027
e-value: 3.2E-8
score: 33.0
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 1467..1510
e-value: 8.3E-12
score: 44.4
NoneNo IPR availableGENE3D3.80.10.10coord: 948..1063
e-value: 5.1E-26
score: 90.5
NoneNo IPR availablePANTHERPTHR11200:SF9SAC DOMAIN-CONTAINING PROTEIN 3coord: 10..1344
NoneNo IPR availablePANTHERPTHR11200INOSITOL 5-PHOSPHATASEcoord: 10..1344
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1469..1511
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 945..1059
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1465..1511
e-value: 3.2E-7
score: 29.1
IPR002013Synaptojanin, N-terminalPFAMPF02383Syja_Ncoord: 91..410
e-value: 2.7E-80
score: 269.4
IPR002013Synaptojanin, N-terminalPROSITEPS50275SACcoord: 153..541
score: 69.329
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 949..970
score: 7.627
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 995..1016
score: 7.181
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 972..993
score: 8.613
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1470..1505
score: 10.925

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000146 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000146EMLSAT00000000146-695993Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000146 ID=EMLSAP00000000146|Name=EMLSAP00000000146|organism=Lepeophtheirus salmonis|type=polypeptide|length=1514bp
MHFKELSRCIQRIIVYETRERFFVLGSNDRQTHFRVLKINRTEPYSLQIT
DDGRVYDPKEINDLVRMMEDGNKSKVRGQKIRSGLQKVASAYGIIGFVRF
LEGYYMILIKARRKVASIGYHSIYKVEETQMIXLPLIDIRENGAEEARYL
KMFQAVDLSANFYYSYSYDLTHTFQYNVEIPTHVMTKNGRISIKDFFPSD
HVPSTLGYISTPNERFLWNSYLTSPVKEVIHEDWVXNIIHGFVDHGNICN
YGISILLTLIARRSHKYAGTRFLKRGLDFDGNVANEVETEQILTSGGSYG
YEXTSFVQCRGSVPSHWTQDISKMVPKPPIYVELNDPFAISAGRHFDDML
QRFGSPIVCVNLVKKENKSKRRKHESILTDELTKSISYLNQFLPPANRIQ
YVHFDMAKCRKSENNLVMHHLHEIAYQALAKTGIFYNRKGYSWYKSKDQN
RYSKFFETFMNLHHNQENGTKQTGIIRTNCVDCLDRTNTAQFVVGKCALG
FQLFAMGFIDQPVVEFETDAARMLEAMYESLGDTIAIQYGGSQLIHRVKC
YRKRTNQWSSKANDITQTIRRYYSNTLSDADKQMMINLFLGVFKPVSGRP
HIWDKEYASDICLHLPHMKQDIDKSGLLLRHNTQWWDRRLKKNLPLPLFY
SEKNCDIALAVDDEEFNYRFDLYTEHYRPFELQYXNECFAYKDTSHTVRD
YMPDFCSEYSPFAVRDWQGKWEEQASSKTKTSSLQSFFTSITSVGSVVGG
GSGAGGSGGGXEKXGEEXEXESEEDSETNSEEFEVVSLMDLNSEYKSDAM
EKYAQNMEYQNFQTFFKSSEEVYGFAMKDPKFPKMKFYSDYVISSDRTCG
DNLSVIMKRGSVYHNGILKTDLNIYAKAFAIQEYGFDQLYVSEEDIAENM
PFWKRNKETINGHSKEKINYKSRLEHKQYLENELSSLSGGGYLSELSENL
VILDLHSNCFEKLPEELGLLKNLQKLNLHHNRLKRLPDSIGQLKRLDTLN
ISHNSLKQLPSSIGECSRLKSIELQENPKLLSLPKEICFARGIETLILDE
DRLTYPSKEEVKNKQIKALEKVILDSQEREKNIAENRETNRKKLIESMVA
EDAKRDEKIAMLHSLKEQEKSTLNKSLQNAENCTDFLISELVKTMNKDRM
NPQKFLEEMEAEKREMEELFTIKAGEVERLRQMDVLCKIDFIFRLIFRLW
ITGNILYNEEMKREELRNQYEAGKQTIISSALHIDSENDKAIQGALQSKG
KHQEALVTELLQDEEYQKNAFSAMYIQQDNRTREISNRMEHIQSELASLT
MIEMTKRDMKVEFEHDLMSEKRETLTNMLITLMNQKEEREKILHDRLIEI
ETRKEKDQENYWLIQYQKLLDSKPKSYTQAEEENIDPELMKILENAGAED
YVGIHDSYLRKKILVTTEEYTSVKSRLAAKTEELEEGIEEPSAPPDEDTP
SAPPASEVIPTVETFQSNECVICLDTKCNILFLPCGHVCSCWKCETNLKE
CPLCRESVKQKVRL
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