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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR021190 | Peptidase M10A | PRINTS | PR00138 | MATRIXIN | coord: 158..186 score: 58.62 coord: 218..243 score: 56.05 coord: 250..263 score: 37.46 coord: 92..105 score: 45.3 coord: 134..149 score: 39.41 |
IPR021190 | Peptidase M10A | PANTHER | PTHR10201 | MATRIX METALLOPROTEINASE | coord: 4..476 |
IPR018487 | Hemopexin-like repeats | SMART | SM00120 | HX | coord: 385..431 e-value: 4.8E-13 score: 59.4 coord: 433..478 e-value: 0.0037 score: 26.5 |
IPR018487 | Hemopexin-like repeats | PFAM | PF00045 | Hemopexin | coord: 433..478 e-value: 3.6E-7 score: 29.6 coord: 385..431 e-value: 2.7E-14 score: 52.5 |
IPR018487 | Hemopexin-like repeats | PROSITE | PS51642 | HEMOPEXIN_2 | coord: 430..477 score: 10.837 |
IPR018487 | Hemopexin-like repeats | PROSITE | PS51642 | HEMOPEXIN_2 | coord: 382..429 score: 15.441 |
IPR006026 | Peptidase, metallopeptidase | SMART | SM00235 | ZnMc | coord: 116..264 e-value: 2.4E-25 score: 100.2 |
IPR000585 | Hemopexin-like domain | GENE3D | 2.110.10.10 | | coord: 353..476 e-value: 1.7E-23 score: 83.0 |
IPR000585 | Hemopexin-like domain | SUPERFAMILY | 50923 | Hemopexin-like domain | coord: 317..469 |
IPR001818 | Peptidase M10, metallopeptidase | PFAM | PF00413 | Peptidase_M10 | coord: 126..262 e-value: 4.3E-42 score: 143.3 |
IPR024079 | Metallopeptidase, catalytic domain | GENE3D | 3.40.390.10 | | coord: 41..266 e-value: 3.1E-60 score: 203.2 |
IPR028737 | Metalloendoproteinase | PANTHER | PTHR10201:SF102 | SUBFAMILY NOT NAMED | coord: 4..476 |
IPR021158 | Peptidase M10A, cysteine switch, zinc binding site | PROSITE | PS00546 | CYSTEINE_SWITCH | coord: 95..102 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..20 score: 0.901 |
None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..27 score: 0.63 |
None | No IPR available | SUPERFAMILY | 55486 | Metalloproteases ("zincins"), catalytic domain | coord: 112..265 |
None | No IPR available | TMHMM | TMhelix | | coord: 5..24 |
IPR002477 | Peptidoglycan binding-like | SUPERFAMILY | 47090 | PGBD-like | coord: 40..102 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000157 ID=EMLSAP00000000157|Name=EMLSAP00000000157|organism=Lepeophtheirus salmonis|type=polypeptide|length=483bp MCKIVFLIVLVLWSLSFSIGIPIPQEAQTTVPPSSSIDLFDFFRNYGYLS TPPPDSETLYTEESISNALLKVQEFGAIEQTGKFDEATRKLLTTPRCGNP DLINGESVGVKKRRKRLDNWSNKFPNKSYVEEKLKKAFDTWSDYSGLVFV QVGELSPANIKISFGRYNHGDIYPFDGPGYTLAHAYYPYSFGSLGGDIHF DEDENWGTEKKHLDLLTVAVHEMGHALGLSHSIDRDSVMFAYYKGDSAAL GYDDILAMYNLYIQNGPPQTDDEDSFGQETHVKKGKVAXSPRXAVTSTSA TMTTTTEDSYNYDGSENPRNEICNGEFQSISVIRREIFIFKGQKDVIWGD VMKYNRFYKYDGRSWTDEPKNNLASIGLPKDTPNIDSIFIWSKNKETYVF KGDHFWRMNSNGTAELDYPKRISDYWNGLPSSIDSIITLDNGETFAFKDG YFYLFNNESLNIESGYPRELGASYWLPHCTLSK back to top
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