EMLSAP00000000227, EMLSAP00000000227 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000227
Unique NameEMLSAP00000000227
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length453
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184RINGcoord: 36..73
e-value: 3.0E-5
score: 33.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 36..74
score: 11.368
IPR002083MATHPFAMPF00917MATHcoord: 330..447
e-value: 3.2E-13
score: 49.8
IPR002083MATHPROSITEPS50144MATHcoord: 305..449
score: 14.05
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 36..71
e-value: 8.6E-8
score: 31.6
NoneNo IPR availableGENE3D2.60.210.10coord: 303..449
e-value: 3.3E-32
score: 111.1
NoneNo IPR availablePANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 21..453
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 29..100
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 25..119
e-value: 5.1E-18
score: 64.0
IPR027139TNF receptor-associated factor 6PANTHERPTHR10131:SF48TNF RECEPTOR-ASSOCIATED FACTOR 6coord: 21..453
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 51..60
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 156..198
score: 8.835
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 304..450
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 167..204

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000227 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000227EMLSAT00000000227-696074Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000227 ID=EMLSAP00000000227|Name=EMLSAP00000000227|organism=Lepeophtheirus salmonis|type=polypeptide|length=453bp
MDKETGRSGTKGIPKHYFQGGYDYDFVQQLPKRFECPICLLCQRDPHQTS
CGHRFCYSCIITWLNEGRTCPDDNCSLGEGDIFPDSMAHREILQLMITCP
QKDHGCGAVIHLSDVZNHLRSCKYITQERSSKKHENPSRSSDSNTCPSCG
NVLDDHEITQGQGNRLVCPYAIVACPFTSAGCAIKIMRRELQDHIKSQTS
HHVSLLWDKLRKIQQNYDTPSLTTQSSVDETASSSFKEGILSRDSDLRLS
GSNLHSTQKLIKDLFRRVVSLEQKNCQLEIRNEMLQEKLKKVMCSEFEAQ
GRYCNGKFVWKLLDFPELHKKMRTDCHFVVYSKGFYTSVFGYKVCLRSNI
NLVNGEEYLGVFVHLMRGDNDSALSWPFRGQISLTAVREISENFFETIKE
IPEGSKAFERPISERNPTGFGFTEFIRVNALYSGGFINTENTLILKAELF
TMD
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