EMLSAP00000000230, EMLSAP00000000230 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000230
Unique NameEMLSAP00000000230
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length418
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005809Succinyl-CoA synthetase, beta subunitPIRSFPIRSF001554SucCS_betacoord: 25..418
e-value: 2.1E-197
score: 665.0
IPR005809Succinyl-CoA synthetase, beta subunitTIGRFAMTIGR01016TIGR01016coord: 26..415
e-value: 6.3E-132
score: 437.9
IPR005809Succinyl-CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 4..416
IPR005811ATP-citrate lyase/succinyl-CoA ligasePFAMPF00549Ligase_CoAcoord: 293..413
e-value: 2.6E-26
score: 91.9
IPR013816ATP-grasp fold, subdomain 2GENE3D3.30.470.20coord: 127..269
e-value: 2.4E-54
score: 182.7
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 47..126
e-value: 1.5E-26
score: 91.5
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 26..234
e-value: 6.9E-70
score: 234.4
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 271..414
e-value: 2.1E-64
score: 215.2
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 270..415
NoneNo IPR availablePANTHERPTHR11815:SF0SUBFAMILY NOT NAMEDcoord: 4..416
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 25..267
IPR017866Succinyl-CoA synthetase, beta subunit, conserved sitePROSITEPS01217SUCCINYL_COA_LIG_3coord: 288..312

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000230 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000230EMLSAT00000000230-696077Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000230 ID=EMLSAP00000000230|Name=EMLSAP00000000230|organism=Lepeophtheirus salmonis|type=polypeptide|length=418bp
MSCTSTSGLLFRRIFHQNKHPRRCLNLLEYQSKGLLEGHNVKVQKFLMAE
NDAEAIAIPKKFPCDEYVIKAQILAGGRGKGIFDNGFKGGVHLTKDKRQV
ASLCSNMLGHSLITKQTPPAGIPVSKVMVAEAIDIKRETYFCILLDREYN
GPVIVASPDGGVDIEDVAERTPERIKKIPISISTGCTHEIAQDVAAFLGF
EGELKEQCAGQIKNLYDMFIKVDCVQLEVNPLAETTDGMIYTADAKLGFD
DNAEFRQKNIFKMEDTTEMDPREVEAAAHNLNYVQMDGNIGCLVNGAGLA
XATMDIIKLYGGDPANFLDVGGSVQEEQVKEAFRIITEDSKVKAILVNVF
GGIVNCATIANGVVNACKSINLNLPLVVRLEGTNVEAAKKILEESGLPIQ
SAADLDDAAKKAVKALGK
back to top
Add to Basket